Leuconostoc kimchii: LKI_06640
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Entry
LKI_06640 CDS
T01233
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lki
Leuconostoc kimchii
Pathway
lki03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lki00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LKI_06640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lki03021
]
LKI_06640
03400 DNA repair and recombination proteins [BR:
lki03400
]
LKI_06640
Enzymes [BR:
lki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LKI_06640
Transcription machinery [BR:
lki03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LKI_06640
DNA repair and recombination proteins [BR:
lki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LKI_06640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
DUF961
dATP-dGTP_PPHyd
Motif
Other DBs
NCBI-ProteinID:
ADG40867
UniProt:
D5T3L8
LinkDB
All DBs
Position
1294439..1295383
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPNIHNIEEDDRYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVNTVQIDGVV
HEFSTVDGVVEDVTQIILNLKKVVLAIDSDDERSLEIDVQGPADVTAADLQAGADVEILN
PDLHLATVAAGKSLHMTVTAVKGRGYSSADENKQLRDEMPIGVLAVDSIYTPIERVNYHV
ENTRVGSRDDYDKLTFDIWTNGSIKPSDALSLGSKILAEHLNLFMDISPVAAEASVMVEA
EPVATNASDSAPIEDLDLSVRSYNCLKRAGINTIVELTDRTEADMMKVRNLGRKSLDEIQ
EKLTEMGIGFRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaagccaaatattcataacatcgaagaggatgaccgctatggcaaa
tttgtcgtagagcctcttgagcgtggatacggtacaacgcttggtaactcactgcgtcgt
attttgttatcatcgcttccaggtgcagccgttaacacggttcaaattgatggcgttgtt
cacgagttttcaactgtggatggcgtagttgaagatgtcacacaaattattttgaatctt
aaaaaagttgtgttggctattgattcagatgatgagcgtagccttgaaattgatgttcaa
ggacctgctgatgtcactgctgcagatttgcaagcaggtgctgatgttgagattttaaat
ccggatttgcatcttgctaccgtagcagcaggaaagtcactacacatgactgttacagca
gttaaagggcgtggctattcatctgcagatgaaaataagcaattgcgtgacgaaatgcct
attggtgttttagcagttgactctatttatacgcctatcgagcgtgtgaactaccatgta
gaaaatacacgtgtaggttcacgtgatgattatgataaactcacttttgatatttggact
aatggttcaattaaacctagtgatgctttaagccttggttcaaaaatcttggctgaacat
ttgaacttgttcatggacatttctccagtcgcggctgaggctagtgttatggtcgaagca
gaacctgtggctactaatgcctcagattctgcgccgattgaggacttagatttgtcagtt
cgttcttataattgtctcaaacgggccggtatcaacactattgtagagttgacagatcgc
actgaagccgacatgatgaaggtgcgtaatctcggtcggaaatcacttgatgagatccaa
gaaaaacttaccgaaatgggtataggatttcgcaaggaagattaa
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