Lactobacillus kullabergensis: DKL58_02755
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Entry
DKL58_02755 CDS
T06382
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lkl
Lactobacillus kullabergensis
Pathway
lkl03030
DNA replication
lkl03410
Base excision repair
lkl03420
Nucleotide excision repair
lkl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DKL58_02755
03410 Base excision repair
DKL58_02755
03420 Nucleotide excision repair
DKL58_02755
03430 Mismatch repair
DKL58_02755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lkl03032
]
DKL58_02755
03400 DNA repair and recombination proteins [BR:
lkl03400
]
DKL58_02755
Enzymes [BR:
lkl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DKL58_02755
DNA replication proteins [BR:
lkl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DKL58_02755
DNA repair and recombination proteins [BR:
lkl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DKL58_02755
NER (nucleotide excision repair)
GGR (global genome repair) factors
DKL58_02755
MMR (mismatch excision repair)
DNA ligase
DKL58_02755
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DKL58_02755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
zf-NADH-PPase
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AWM74953
UniProt:
A0A2Z3HEM0
LinkDB
All DBs
Position
540655..542667
Genome browser
AA seq
670 aa
AA seq
DB search
MADLTLDEARKEVAALRDKLDDWANAYYTNDTPEVEDNVYDKNYNRLVELEQEFPQLVSQ
DSITQKVGGQIDNQFTKVNHEIPMLSMGDVFSKEELQEFDDRVQKQIGHEVAYNVELKID
GLSIALEYTNGKLTRASTRGNGQVGEDVTPNARYIADIPQTLPEKLTTEVRGECYMGKEP
FAKLNAERDEKGETTFANPRNAAAGSLRQLDASITKHRHLSTFIYTWVNPPAEITSQHQA
IEKMTQLGFHTNQTGRRIAKMSDIFTFIDEYTAKRNSLDYGIDGIVLKVDDLDLQQELGN
TVKVPRWEIAYKFPPEEQETVVHEIKWTVGRTGVVTPTAIMDPVQLAGTTVSHAVLHNAD
LLQQKDVRIGDTVMLHKAGDIIPEISEVVLAKRPKDAQPYPIPTKCPSCGEKLIHLKDEV
ALRCVNPSCPAQIEEGITHFASRPAMNIDGLGPKIVRQLIKNDLVHNVADLYHLNAADLA
KLDHFKDKSISNLLNAINNSKRNSVELLLTGLGIDHVGAKAARLIAQKFKNMAKIMAADV
QDVAAIDTIGMTIAESLTTYFAQDEVVDLVNELKNSGLNMDYLGAGPEETESIPDNYFKD
KTVVLTGTLAHYTRSEFTKKLQSMGAKVTSSVSGKTDYVIYGQDAGSKYSKAQKLGVPLL
TEEEAIAQVK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttaactcttgatgaggccagaaaagaagttgctgcgctgagagataaactg
gatgattgggcaaatgcatattatacaaatgacacaccagaagttgaagataatgtgtat
gataaaaactataatcgtttagttgagcttgaacaggaatttccgcaactggtgtcccaa
gattctattacccaaaaggttgggggccagattgacaatcagtttaccaaggttaatcac
gaaattccgatgttatcaatgggtgacgtcttttcaaaagaagaattacaagaatttgat
gacagagtacaaaaacagattggtcatgaagttgcttataacgtcgaattaaaaattgac
ggtttatcaattgcacttgagtatactaacggtaaattaaccagagcttcaactagaggt
aacggtcaagtaggtgaagacgttactcctaatgcacgctatattgcagatattccccaa
actttacctgaaaaattgacaacggaagtacggggcgaatgttatatgggcaaagagcct
tttgcaaagcttaatgcagaacgtgatgaaaagggagaaacaacttttgccaatccgcgt
aacgccgcagctgggtctttgaggcaactggatgccagtattaccaagcaccgtcattta
agtacgtttatttatacttgggttaatccaccagcagaaattaccagtcaacaccaggct
attgagaaaatgactcagcttggttttcacaccaaccaaactgggcgcagaattgctaaa
atgtctgatatttttacttttattgatgaatatactgcaaaaagaaattcacttgattat
ggcattgatggtatcgtcttaaaagttgacgatctggatttacaacaagaactgggaaac
acggttaaagtgcctcggtgggaaatagcttataagttcccaccagaagagcaggaaact
gtggttcatgaaatcaaatggactgttggccgtactggtgtcgtaacgcctactgctatc
atggatcctgtgcaacttgctggtaccacagtttctcatgcagttttgcataacgccgat
ttgctgcaacaaaaagatgttcgcattggtgataccgttatgctgcataaagcgggtgac
attattcctgaaatttcagaagtggtgctggctaaacggcctaaggatgcccagccgtat
ccaatcccgacgaagtgcccatcgtgtggtgaaaaactgattcatctaaaagatgaagta
gctttgcgttgcgttaatccgtcttgtcctgctcaaattgaagaaggaattactcacttt
gcttcaagacctgcaatgaatattgatggtttaggacctaaaattgtgcgacagctgatt
aagaacgatctggtacataatgtggctgatttatatcatttaaatgcagctgatttggca
aaactagatcatttcaaagataaatccatcagcaatttattaaatgcaataaataattcg
aaaagaaattcagtcgaattattgttaactggactgggtattgatcatgttggtgctaaa
gctgcacgtttgattgcacaaaagtttaaaaatatggcaaagattatggcagcggacgtg
caagatgtggctgcaatagatacaataggcatgacaattgcagaatctttgactacttat
tttgctcaagatgaagtcgtagatttagtcaatgaacttaaaaatagcggccttaatatg
gattatctgggtgcaggtccagaagaaactgagtctattccagataattactttaaagat
aagactgttgttttaacagggactttggctcactatactagaagtgaatttactaaaaaa
ttgcaatctatgggtgcaaaagtaactagttctgtttctggtaaaacagactatgtcatt
tacggtcaggatgctggttccaagtactccaaggctcagaaactgggtgtaccattattg
actgaggaagaagcaattgctcaagttaaataa
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