Lepidochelys kempii (Atlantic ridley): 140915641
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Entry
140915641 CDS
T11378
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
140915641 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140915641 (IRF1)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
140915641 (IRF1)
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
140915641
NCBI-ProteinID:
XP_073211751
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Position
8:complement(15353201..15362756)
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AA seq
322 aa
AA seq
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MANNMPVTRMRMRPWLELQINSNQIPGLVWINKDKMMFQIPWKHAAKHGWDIDKDACLFR
SWAIHTGRYKIGEKAPDPKTWKANFRCAMNSLPDIEEVKDKSVNKGCSAVRVYRMLPPLT
KLQKKERKSKSSRESKNRSKRKTYEDPRMDEAIEALNSSSLPDDHSGYTVHSYAEQEVEI
ENASITLDLSPCDMNALTDWRNPMEIAMADSTNDLYHLQVSPLASSSEVTDDDAEEMREQ
LYKLFEQQDWHATSVGGKGYLTNEPGTQNICSNFSYKEQDSEIDTTSGEIEFRFCTDLKS
SLEFSWLDTVRSTGIQAIPCSL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaacatgccagtaacaagaatgcgcatgaggccttggctggagttgcagatt
aattccaatcaaataccaggattggtgtggatcaacaaggataagatgatgttccaaatc
ccatggaaacatgcagctaaacatggctgggatatagataaagatgcctgccttttccgg
agctgggccattcatactgggagatacaagataggcgagaaagcgccagaccccaaaact
tggaaggcaaatttccgctgtgccatgaattcactgcctgatattgaggaagtgaaggac
aaaagtgtcaacaaaggctgcagcgcagtccgagtttacaggatgctaccacccttaaca
aagcttcagaaaaaagaaaggaagtcaaagtcatctagagagtcaaaaaacaggagtaag
agaaagacatacgaagacccaaggatggatgaggcaatagaagcactgaacagcagcagt
ctaccagatgaccacagtggttatacagttcacagctatgcagaacaagaagtggagatt
gagaacgcttccatcaccctagatctctcaccgtgtgatatgaatgcactgacagattgg
agaaatccaatggaaatagcaatggctgacagcaccaatgacctttaccaccttcaagtg
tcacctttggcttcatcttctgaagtaacagatgatgatgcagaagaaatgagagagcaa
ctttacaagctgtttgaacaacaagactggcatgcaaccagtgtcggtgggaaagggtat
ctcaccaatgagcccggcacacaaaacatttgcagcaacttcagctacaaggagcaagat
tctgaaatagatacaacctcaggggaaatagagttcagattttgtactgatctgaaaagc
agtctagaattctcttggctggacacagttcgatccactggtatacaagccattccatgt
agcttgtaa
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