Lactococcus lactis subsp. lactis KLDS 4.0325: P620_03590
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Entry
P620_03590 CDS
T02882
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lld
Lactococcus lactis subsp. lactis KLDS 4.0325
Pathway
lld03410
Base excision repair
lld03430
Mismatch repair
lld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P620_03590 (recJ)
03430 Mismatch repair
P620_03590 (recJ)
03440 Homologous recombination
P620_03590 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lld03400
]
P620_03590 (recJ)
DNA repair and recombination proteins [BR:
lld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
P620_03590 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
P620_03590 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P620_03590 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
HTH_7
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AGY43843
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Position
641992..644220
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AA seq
742 aa
AA seq
DB search
MIKAKYDWKVADTAISEDFLKIAKKHKLDELTSRVLYQRGIHAEAEIEQFLKPSLENLHD
PFLLHDMEKATGRILSAIEQGENILIYGDYDADGMTASSVMKSALDELGAEAQVYLPNRF
TDGYGPNLDVYQYYIKNENINLIITVDNGVAGLEAITWAQENGVDVIVTDHHSIPDQLPP
AYAIVHPEHPDSQYPFKYLAGVGVAFKVACALLEYAPSEMLDLVAIGTIADMVSLTDENR
ILVAHGLKVLAQTERAGLQELMKYAGVDFDKITEETVGFQIAPRLNALGRLDDPNPAIEL
LTGWDEDEAHEIAKMIDQKNSERKEIVEKIHNEALSMLTDEPVQILYHKDWHKGVLGIVA
GRLLEAIHKPVIMLAQEDGILRGSARSIENFDIFKALNAHRELFIAFGGHKQAAGMTLSL
ENVEAVKKAMIDYIVDNHLDMSKKSPLEIADRCHLDDISLSTITNLAKLAPFGMDNPKPR
FLIEDYKVIQSRSMGKDNAHLKLKIQEEKQQIDAVYFQHGSEELEFEQAQTKLVATLSSN
SWNGNTSLQLMIEDADSVGVELLDIRSKQIPIPKEANIFSQNQLKHGIMEDVLVIEETPG
DLAGLSVLKEAVSKAASDDFKMIYFKNKITDSYYLTGSGTREEFARLYKAIYQFPEFDIR
YKLKSLADYLKIPHLLLVKMIKIFEELEFVSIDNGLMTVNKTADKREISESTIYQELEKI
VKMQELFALAPVKEIYQNLLEK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagcaaaatatgattggaaagtggctgatacagccatttccgaagattttcta
aagatagcgaaaaaacataaattagatgaattgacaagtcgcgtgctttatcaaagagga
attcatgcagaagctgaaattgagcaatttttaaagccaagtttagaaaatttacatgac
ccttttctacttcatgatatggaaaaagcaacagggcgtattttatcagcaattgagcaa
ggtgaaaacatcttaatttatggtgactatgatgctgacggaatgactgcatcatcagtc
atgaaatccgctctggatgaattaggagctgaggctcaagtttatttacccaatcgtttt
actgatggttacgggccaaatcttgacgtttatcagtactatattaagaatgaaaatatc
aatcttattattactgtagataatggggttgctggcttggaggcaattacctgggcacag
gaaaatggagtggatgtaattgttaccgaccatcactcaattcctgaccaacttccccct
gcttatgccattgtccaccccgaacatcctgacagtcaatatcctttcaaatatttggca
ggagttggtgtcgccttcaaagttgcctgtgctcttttagaatatgcacccagtgaaatg
cttgatttagttgcaattggtacaattgctgacatggtcagtttgactgatgaaaaccga
attttagtggctcatggtctaaaagttttggcccaaacagagcgtgccggcctacaagaa
ttaatgaagtatgccggggttgattttgataaaatcactgaggaaacggttggttttcaa
attgctccccgtttaaacgctttgggacgtctcgatgacccaaacccagccattgaattg
ctgacaggttgggatgaagatgaagcgcatgaaattgccaaaatgattgaccaaaaaaat
tcagagcgaaaagaaattgtggaaaaaattcacaatgaagctctgagtatgctgacagat
gaacctgttcagattttatatcataaggactggcataaaggtgtcttaggaattgttgcg
ggtcgcttgctagaagccatacataagccagtaatcatgctggcccaagaagatgggatt
ttgcgtgggtctgctcggtcaatcgaaaattttgatattttcaaggcattaaatgcccat
cgtgaactttttattgcttttggtggtcataaacaagccgcagggatgactttaagtctg
gaaaacgtagaagcagttaaaaaggcgatgattgattatatcgtggacaatcatttagat
atgtctaaaaaaagtcccttagaaattgctgaccgttgccacttagacgatatttcgctc
tcaacaatcactaatttagcaaaattggctccctttggcatggataatcctaagcctcga
tttttaatcgaagattataaggtgattcaaagccgaagtatggggaaagacaatgctcat
cttaaattaaaaattcaggaagaaaagcaacaaattgatgccgtttatttccaacatggt
tcagaagaattggaattcgaacaggcacaaacaaaattagtcgcaacactttcaagtaat
agttggaatggaaatacgagtcttcaattaatgattgaagatgctgattcagttggtgtc
gaacttcttgatataagaagtaaacaaattcctatcccaaaagaggctaatattttttct
caaaatcagctaaaacatggtataatggaagatgtgcttgtcatcgaagagacacctgga
gatttagcaggtttgtcagtattaaaagaagctgtcagtaaagcagcgtcggatgatttt
aaaatgatttattttaaaaataaaatcactgatagctattatttaacaggaagtggaaca
cgagaagaatttgcaagactttataaagcaatttatcaatttccagaatttgatattcgc
tataaattaaaatcacttgcggattatttgaaaatccctcatctcttgcttgtcaagatg
ataaaaatctttgaggaacttgaatttgtcagcattgacaatggcttaatgaccgttaat
aagacggccgataaacgcgaaatttctgagagtacaatttatcaagaactagaaaaaatt
gtaaaaatgcaagaactttttgctttagcacccgtcaaagaaatttatcaaaatttatta
gaaaaataa
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