Fructilactobacillus lindneri: AYR59_03690
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Entry
AYR59_03690 CDS
T04666
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lle
Fructilactobacillus lindneri
Pathway
lle03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AYR59_03690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lle03021
]
AYR59_03690
03400 DNA repair and recombination proteins [BR:
lle03400
]
AYR59_03690
Enzymes [BR:
lle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AYR59_03690
Transcription machinery [BR:
lle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AYR59_03690
DNA repair and recombination proteins [BR:
lle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AYR59_03690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ANZ59833
UniProt:
A0AB33BQT7
LinkDB
All DBs
Position
775619..779242
Genome browser
AA seq
1207 aa
AA seq
DB search
MAGNVVKYGKHRTRRSYARIKKVLDLTNLIEVQTNSYNWFLDEGLREMFKDIMPIDDFQG
KLSLDFVDYQLLEPKYTVAEARAHEVNYSAPLHVTLKLTNHETGEIKTQDVFFGDLPLMT
DQGTFIINGAERVIVSQLVRSPGAYYHKELDKNGREIYSATVIPNRGAWMEFATDAKNVS
YIRIDRTRKLPITELVRALGFGSDDDITQIFGSTNDSLNLTLEKDVHKDSSDSRTEEALK
DIYERLRPGEPKTAESSRNLLTTRFFDPKRYDMAPVGRYKTNKKLSLKNRLMGLALAETL
ADPETGEIIANKGDIVDKELMKKLAPHLDNKDFKAYTFNPSAEAVVTDPVTVQIIKVYSN
KDPEKVVPVVGNDNISLDYKHITPADMLAEVNYFFDLQEGIGSVDDIDHLSNRRVRSVGE
LLQNQFRIGLSRMERVVRERMSIQDTATVTPQQLINIRPVVASVKEFFGSSQLSQFMDQT
NPLGELTHKRRLSALGPGGITRDRAGYEVRDVNYTHYGRICPIETPEGPNIGLINSFSGY
ARVNKYGFIESPYRRVDWKTHKVTEKIDYLTAGDEDKYVIAQANSPLNDDGSFKEEHVMA
RDKSEYVEANTNNVDYMDVSPKQVVSVATACIPFLENDDSNRALMGSNMQRQAVPLINPH
APLVGTGMEYKTAHDSGVAKIAKYAGIVEYVDASVIKIRRDNGTLDTYELTKFMRSNNGM
NYNQSPIVKTGDHVDVDEIIADGPAMENGELALGQNPTVAFMTWQGYNFEDAIAISERLV
KEDAYTSIHIEEYESETRDTKLGPEEMTREIPNVGEDALKDLDEEGIVRVGAEVHDGDIL
VGKVTPKGVTELSSEERLLHAIFGEKSREVRDTSLRVPHGADGVVQDVKVFSRENGDELQ
PGVNKMVRVYIAQKRKLQVGDKMAGKHGNKGTVSIVIPEEDMPYMPDGTPVDILLSPMGV
PSRMNIGQVLEMHLGMAAKKLGIHVATPVFDGATSDDVWSAVREAGMSHDGKTILYDGRT
GEPFDKPIAVGVMGYLKLNHMSEDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAHTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQALGLDM
KVLGSNHQPIDLRDMDDDDDVVNVNALNKIAHEQDEKKEEKKKEEAAKAANSDASDENDN
NKDENNN
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaacgttgttaagtatggtaaacaccgtactagaagaagttacgcgcgaatc
aaaaaagttttggatcttacaaacttgattgaggttcaaactaactcatacaactggttc
ttagacgagggtcttcgtgagatgtttaaagacattatgccaattgatgattttcaagga
aaactttcgttggactttgtagattatcagttattagaacctaaatacactgttgctgaa
gcacgagctcacgaagttaattattcagctccattacacgttacactcaaattaactaac
catgaaactggtgaaattaagacacaagatgtgttctttggtgatttgcctttaatgact
gatcaaggaactttcattattaatggtgccgaacgagttattgtttctcaattagttcgt
tccccaggtgcttattaccacaaagaattagataaaaatggtcgtgaaatttacagtgcg
actgttattcctaatcgtggggcttggatggaatttgcaacggatgctaaaaatgtttct
tacatccgcattgatcggactagaaaacttccaatcaccgaattagttcgagctttaggt
tttggttctgatgatgacatcacccaaatctttggcagtacaaatgatagcttgaatctt
actttagaaaaggatgttcataaggattctagtgattctagaactgaagaagccttaaaa
gatatttatgaaagattgcgtcctggagaacctaagaccgctgaatcttctagaaatctt
ttaaccactagattctttgatcctaaacgatatgatatggctcccgttggtcgttacaag
actaataaaaaattgagtctaaaaaaccgtttaatgggattagcacttgctgaaacctta
gctgatcctgaaactggtgaaatcattgccaataaaggcgatattgtcgacaaagagtta
atgaaaaaacttgcgccccatttagataataaagatttcaaagcttatacctttaatcca
tctgcagaagcagttgtgaccgatcctgttacagttcaaattattaaagtatattcaaat
aaagatcctgaaaaagttgttcccgtagttggtaacgacaatatcagtcttgattataaa
cacattactcctgctgatatgctcgctgaagttaattatttctttgatttacaagaagga
atcggctcagttgatgacattgatcatttgagtaatcgtcgagttcgttcagttggtgaa
ttattacaaaaccaatttagaattggactttctagaatggaacgggtagttcgtgaaaga
atgtcaattcaagatactgccacggttaccccccaacaattgattaatattcgtccagta
gttgcttccgtaaaagaatttttcggttcctcgcaactttcacaattcatggatcaaact
aatcctttgggagaattaactcacaaacgtcgtctttctgcgcttggacctggtggtatt
actagagatcgagctggatatgaagttcgagatgttaactacactcactatggtcgaatt
tgtccaattgaaactcctgaaggtcctaacattggattgattaactcattttcaggatat
gcacgggtaaacaaatatggctttattgaatctccatatcgtcgagttgattggaaaaca
cataaagttactgaaaaaattgattatttaactgctggtgatgaagataaatatgtgatt
gctcaggctaactcaccattaaatgacgatggttcctttaaagaagaacacgttatggca
cgtgataagtcagaatatgttgaagctaatactaacaatgttgattatatggatgtttct
cctaaacaagttgtttcagttgccactgcatgtattcctttcttggaaaatgatgactct
aaccgtgctttgatgggttctaacatgcagcgtcaggctgttccattgattaatcctcat
gctcctttagtaggaactggaatggaatacaaaactgctcatgattctggagttgcaaaa
attgctaaatatgccggaattgttgagtatgttgatgccagcgtgattaaaattcgtcgt
gataacggtactttagatacttatgaattaacgaaattcatgcgttctaataatggtatg
aattataaccagtcaccaattgttaaaactggtgatcatgttgatgttgatgaaattatc
gctgatggtcccgcaatggaaaatggtgaacttgctcttggtcaaaatccaacagttgcc
tttatgacatggcagggatataacttcgaagatgccatcgctattagcgaacgtttagta
aaagaagatgcatatacatctattcatattgaagaatacgaatcagaaactcgtgatact
aaacttggacctgaggaaatgactagagaaattcctaatgttggtgaagatgctttgaaa
gatcttgacgaagaaggaattgtacgagttggtgctgaagttcatgatggtgatatctta
gttggtaaagttactccaaaaggtgtgactgaattatcttctgaagaacgtttgcttcat
gccatttttggagaaaaatcacgtgaagttcgtgatacttcattacgtgttcctcatggt
gctgatggtgttgttcaagatgttaaagttttctcaagagaaaacggggacgaacttcaa
cctggcgttaataaaatggtacgagtatatattgcccaaaaacgtaaattacaagtcgga
gacaaaatggctggtaaacatggtaataagggtacggtttcaatcgtaattcctgaagaa
gatatgccatacatgcctgatggaactccagttgatattttgttgagtcccatgggtgtt
ccatcacgtatgaacattggacaggttttggaaatgcatctgggaatggctgcaaagaaa
cttggaattcatgtggctactcctgtctttgatggtgctacttctgatgatgtttggtct
gcggttagagaagccggaatgtctcatgatggtaaaactattctttacgatggaagaacg
ggtgaaccatttgataaaccaattgctgttggtgttatgggttatctgaagttaaaccat
atgtcagaagacaagattcatgctcgttcaattggaccttactcactagttacccaacaa
ccacttggtggtaaagctcaatttgggggacagcgttttggtgaaatggaagtttgggcc
ttggaagcttatggtgctgctcatacattgcaagaaattttgacttataagtcagatgat
gttgtaggtcgagtaaagacttacgaagcaattgttaaaggtgaaccaattccaaagcca
ggagttccagaatcattccgagtacttgtaaaagaattacaagctcttgggcttgatatg
aaagtccttggttccaatcatcaaccaattgatcttcgtgatatggacgatgatgacgat
gttgtaaacgtgaatgcgcttaacaagattgcccacgaacaggatgaaaaaaaggaagag
aaaaagaaagaagaagctgctaaagcagccaattcagatgcttccgatgaaaacgataac
aataaagacgaaaacaataattaa
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