Lutzomyia longipalpis: 129792074
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Entry
129792074 CDS
T10428
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
lll Lutzomyia longipalpis
Pathway
lll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129792074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lll03019
]
129792074
Messenger RNA biogenesis [BR:
lll03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129792074
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129792074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
129792074
NCBI-ProteinID:
XP_055686767
LinkDB
All DBs
Position
3:complement(11290010..11313158)
Genome browser
AA seq
2425 aa
AA seq
DB search
MNQDSLSFTLTQISYLVSTLNKKNFDKNSRQLDKLVREFGLEADRHYLRCLFAAIDFADS
QIAKHSLQAKLLCGNLLFLLGRPSFVSTICYTFENYLTSQKTLKLSPNFLNTVARTLSLS
QIKEVAIAYSLLHSANPELAKYAEQHLKTCLPKFIQSYIDIDPSRPNQEGSLNDIAPELL
QVIISVISHGKHAQFGLSDVIYDKFITHLCRDFPRDRVPLILAPLLYAEEPEVPADRIVG
GNQAAVGVMSSGIMDTSWANLVMDIGYSFTVSVDECKNHLIKVTGREIGAQDVAKILALM
CRTHSNLSESSINLPTPGAFWAAGAQGGAGATGTPADGTKDKVTAGPPGTPAADHVTWKP
DVFVQALKEVVPALSWKDVCVGLDHAEFMLKDRAGLNLLVTTLRLGLQSMTPPQNFPAEC
LYRHWTNTEGQLSLISLILKNADIFSFADYIFTSVSVELLKTPPEADNKEIAAWKSLHLV
EVLLYIAENGFYTAVMELFKTPIQHCPDVLFMALLQINPPLTVLRQELFQNLIPIFLGNH
PNSGAILHHAWNSANLSPSLRHIIMHSMSEWYLRGDNDQSRLSRILDVAQDLKALSNLLN
VRSFMFVIDLACLASRREYLKLEKWLSDKIREHGEPFVQVMVKFLQRRCPQIVGAKILDD
QLPKAAQLPHETLNTMVSCLHACIGNVQPELNEIIITMNANCNNLMKMQQRQPPPPNVLR
PHRAIETPFNASSLGGQIFTAPTVDSFTSNMAGLNLGGPGNGSFNFNVLGNLMSTPASPS
RLLSAPSNSPFSIMPMQSTPQMNITRIQPTPTGDKITMAPNTQQLFTDGTSTVSKEAEDE
ANSYFQRIYNHPPHPTLSVDEVLDILQRFQESRIRFENEVYTCMLRNLFEEYRFFPQYPD
KELQITAQLFGGMIERSLVATYVSLGLALRCVFDALRKPEGSKMYYFGITALDRFKSKLH
LYQKYCEHVRTIPHFDQFPPHLVEYVEYGANQQEPPNKPQAIVQSTLAQMAAMPSSTGGT
SALYSRSSSVTSNLTTTPTAKTPNPTNPPSASLTTSRVKSIANATNIDTLLVATQDREEK
IVTPPDAVQEKTAFIFNNLSQLNLTQKCEEIKEIMTKDYWAWLSQYLVLKRASIEVNFHV
LYSNFLDALKINEINRLVTKETFRNIRVLLRSDKSIANFSDRSLLKNLGHWLGMLTLGRN
RPILHVDIDLKSLLMEAYHKGQQELLYVVPFVAKVLESCAKSKVFQPPNPWTMAIMNVLA
ELHQEPELKLNLKFEIEVLCKNFNIDVSDLKPVVYLKDAEKAHKIEYQLSQPGKVKEPIQ
QPIAPLHSGATASDDTSSVTSSTPAPSSSSGNVAGSPSQSLDAQSTALGPPEPRFNYMDI
TVSNFSCINNLMTISPNILLLHTQPHLKALVRTAIERTLTDWMTPVVERSVKIATTTCEQ
IIRKDFALDGDENRMRTAAHYMIRNLSAGMAMITCREQLLLTITTNIKNAFNAAVTPQQK
EFVDAAATQLASDNMELACAIIQKTTVEKAIPEIDKRLASDYEIRKVTRQEGRRYCDEAV
YNYHCENMPKRIRLKIGGISSEQFAVYDEFARNIPGFQPITDQDMAHFLPAQSFQDPMSM
SSFAAQMPQQTVVGSNQFSGSDFGTLYDDLGNKIESFLNGTMNMPGLQVQTTNMASLLDY
LVAARRQRDNMTAISLLNKAVEGLLDGFVNIPEHAEHIKMFRDIHLRVMRMMQDSRAFGV
VTTNRIITKYFFECREEIRYNLEAIDLLFSSNFINVPNFDILLSQLMDNGNNYLAVAFAM
QLIQHFCIEERQATVLTENDFVNTIDLLTRISVHHHRAPEGLPHLIEILRLNQDPNNLLS
IERMQNPHINSGIVQVRNTNEMEDPPGLISKTEYLLKDWVNIYHNQALNRDPMKVFGMFV
GKMNICGILKTDDLITRFFRQATQLCIDVVYTNINEVNNMPTVGKSKCFQWIDAFVRLIA
LLVKHSGDNGNATTKINLLNKVLGIVVGVLQQDQEVRGVAFQQLGYHRLFIMLFLELSNP
EPVLENISLHEGLSQQTVTAFCHTYHLIRPSVAPGFCYSWLELISHRVFIGRVLAMIPQQ
KGWSMYSQLLMDLFKYLAPFLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDHHFGFC
DAIPPNCIQMRNIILSAFPRNMRLPDPFTPNLKVDMLSEISTAPRIFTNYVSNIQPATFK
KDLDSYLKARAPVTFLSELRGHLQVSNEPGSRYNIPLMNALVLYVGNQAITLIRSKNLVP
NMTTIVHSAHMDIFQNLAVDLDNEGRYLFLNAVANQLRYPNSHTHYFSCVLLYLFVEANS
EAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPVYKFWDHDFVHCAPEIEKLFESVA
RSCMVVKTNNQQTLNSVEAELQECN
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggattctttgtcattcactctaacgcagatcagttatttggtttcaacccta
aacaagaagaatttcgataagaatagccgacaacttgacaagctcgttcgtgaattcggc
ttggaagcggaccgacattatctgcgttgtttattcgcggcaattgactttgcggactct
caaatagccaaacactcactccaggcgaaactcctctgtggcaatttactcttcctcctg
ggacgcccatcatttgtctccaccatctgctacacatttgagaattacctcacatcgcag
aagacactgaaattatcaccaaattttctcaatacagtggcacgaacgctgagtttgtca
cagataaaagaagtagcaattgcctattcgctcctccattcagcaaatccagaacttgcc
aaatacgctgaacagcacttgaaaacttgcctcccaaagttcattcagtcgtacattgat
attgacccatctcgtccgaatcaagaggggagtttaaacgatatcgctccggaattgctg
caggtgattatttcggttatatcgcacgggaaacacgcgcaatttgggctatcggacgtt
atctacgacaaattcatcacacatttgtgtcgggactttccacgcgatagagtaccactc
atccttgcacctttgctgtacgctgaggagcccgaagtgccagctgataggattgttggg
gggaatcaagcggctgtgggtgtgatgtcgagtggaataatggatacatcgtgggcgaat
cttgtgatggacattgggtattcgttcacggtgtccgtggatgagtgcaagaatcatttg
attaaggtgacagggcgggagattggggcacaggatgtggccaaaattctcgctcttatg
tgtcggacgcatagcaatttgtcggagagtagtattaatttgccaacaccgggtgctttc
tgggcggcaggggcacaaggtggggcaggggcaacgggaacacctgccgatgggacaaag
gataaagttacagcaggaccaccggggacaccggctgcagatcatgtcacatggaagccc
gatgtgtttgttcaggcactcaaggaggttgttccggcgctgagttggaaggatgtttgc
gtgggattggatcatgcggaatttatgctgaaagatcgtgcaggattgaatcttctcgtg
acaacactccgtttgggtttgcaatcgatgacaccaccacagaatttcccagctgaatgc
ctctataggcattggacgaataccgaaggacaactctcgctgatctccctcattctcaag
aatgccgacattttctcctttgccgactacatcttcacgagtgtctcggtggagttgctc
aagacacccccggaggcggataataaggaaattgccgcatggaagtcacttcatcttgta
gaggtgctcctgtacattgctgagaatggcttctatacggctgtaatggagttgtttaag
acacccattcaacactgtccggatgtcttgtttatggccctgctgcagattaatccgccg
ctaacggtgctgcggcaggaactctttcaaaatctcattcccatctttttgggtaatcac
ccaaattccggagctattctgcatcatgcatggaattcggcaaatctcagtccatccctc
aggcatatcataatgcattcaatgagtgaatggtacctccgtggggataatgatcaatca
cgcctttcacgtattctcgatgttgcgcaggacttgaaggcactctcaaatctcctgaat
gttcgctcatttatgtttgtcattgatctggcgtgcctggcgtcacgtagggagtacctc
aagttggagaagtggctcagtgataaaattcgcgaacacggtgaaccctttgtgcaggtc
atggtgaaattcctccaacggcgttgcccacaaattgtcggggcgaaaattctcgatgat
caactcccgaaggcagctcaactaccccatgagacactcaatacaatggtgtcctgcctc
catgcgtgcattgggaatgtccagccggagctgaatgaaataatcatcacaatgaatgcc
aattgcaataatttgatgaagatgcaacagcgacagccaccaccacccaatgttctgcgg
ccacatcgtgccattgagacaccctttaatgcctcaagtctcggtgggcagatcttcacg
gcacccacggtggattcgttcacatcaaatatggctggattgaatttgggtggacccggg
aatgggtcgttcaatttcaacgttctcggcaatctcatgtcgacacccgcatcgccgtcg
cgattgctctcagccccctcaaatagccccttctccattatgccgatgcaatcaacgccc
caaatgaacataacgcgcattcagccaacgccaacgggggataaaatcacaatggcaccc
aatacgcagcaattgttcacagatggaacatcaacggtgtccaaggaggcagaagatgaa
gctaatagctactttcagcgcatctacaatcatccaccacacccaacactttcggttgat
gaggtcctggacattctccagcgcttccaggaatcgcgtattcgtttcgaaaatgaggtg
tacacgtgcatgctacgaaatttattcgaggaatatcgcttcttccctcagtaccccgat
aaagagttgcaaattacagctcaactatttggtgggatgattgaaagaagtctcgtggct
acgtacgtgtcacttggccttgccctacgctgtgtctttgacgcattgcgcaagcctgag
ggatctaaaatgtactacttcggtattacggcattagatcgtttcaagagcaagttgcac
ttgtatcaaaaatactgcgagcatgtccggacgataccgcatttcgatcaatttccgccg
catttggtggagtatgtggagtatggggcgaatcagcaggagccaccgaataagccgcag
gccattgtacagtcaacccttgcgcaaatggcagcaatgccatcgagtacggggggtaca
tcggcattgtatagtcgtagtagttcagtgacgagtaacttgaccacaacgcctacggca
aagactcccaatccgacgaatcccccatcggcgtccctaacgacgtcgcgggtgaaatca
attgcaaatgctacgaatattgatacgttacttgtggcaacgcaggatcgtgaggagaag
attgttacgccgccggatgcggtgcaagagaagacggcgtttatctttaataatttgagt
cagttgaatttgacgcagaaatgcgaggagattaaggagattatgacaaaggactactgg
gcatggctatcgcagtatcttgtactcaagcgtgcctcgattgaggtgaatttccacgtg
ctgtactcaaacttcttggatgccctgaagatcaatgagattaatcgtcttgtcacgaag
gaaactttccggaatattcgtgttctcttgcgaagcgataagagtattgcaaatttctcc
gataggagtttgctgaagaatctcgggcattggcttgggatgctgacgctagggcggaat
aggccaatccttcatgttgacattgatctcaagagtctcctcatggaggcctatcacaag
ggacagcaggagttgctgtatgttgtcccttttgtggcaaaagtccttgaatcatgcgcc
aaaagtaaagttttccaaccaccgaatccgtggacaatggcaattatgaatgtccttgcg
gagttgcatcaggagccagagttgaagttaaatttaaaatttgaaattgaggtactttgt
aagaatttcaacattgatgtgtctgacctgaagcccgtggtgtacctcaaggatgccgag
aaggcgcacaagattgagtatcaactatcgcaaccgggtaaggtgaaggagccaattcag
cagccaattgctccccttcacagtggtgcaacagcatcagatgatacgagttccgtgact
tcatcaactcctgctccttcgtcgtcaagtgggaatgttgcggggtcaccgagtcaatcg
ttggatgcccaatcaacagccctgggtccaccggaaccacgtttcaactacatggacatc
actgtgtcgaatttctcatgcatcaacaacctcatgacaatctccccgaatattctactc
ctgcacacgcagccacatctcaaggcgctcgtacgtacagcaattgagcgcaccctaacg
gattggatgacccccgttgtggagcgtagtgtgaagatagcaacaacaacatgcgaacaa
attatccggaaagattttgccctcgatggcgatgagaatcgcatgcgaacggcagcacac
tacatgataaggaatttgtcagccggtatggccatgataacttgtcgcgaacaactactc
cttaccattacgacaaacatcaagaatgccttcaatgccgccgtgacgccgcaacagaag
gaatttgttgatgcagctgccacgcaacttgcatcggacaatatggagctggcttgtgct
ataatacagaagacaacggttgagaaggcaattccggagattgataagcgccttgcgagt
gactacgaaataagaaaggtgacacggcaggagggaagaaggtactgcgatgaggcagtt
tacaattatcactgcgaaaatatgccaaaaaggattcggctcaaaattggggggatctca
agtgagcaatttgcagtttatgatgaattcgcaaggaatatccccggatttcaacctatt
actgatcaggatatggcgcatttcctaccagcacagtccttccaggatcccatgtcgatg
tcatcatttgcagctcagatgccacagcagactgttgtgggatctaatcaattcagcggc
tcggactttgggacgttgtacgatgatttgggcaataagattgagtccttcctcaatggg
acaatgaatatgccgggattgcaggtgcaaacgacaaatatggcttccctgctggactac
ttggtggcagcacgtcgtcagcgtgacaacatgacggcaatttcgttgctgaataaagcc
gttgagggcttactggatggctttgtcaatatccccgagcatgcggagcatattaagatg
ttccgtgatatccatttgcgtgtaatgcgtatgatgcaggatagccgagctttcggtgtg
gttacgacaaatcgcatcattacgaagtatttctttgaatgccgcgaggagattcgctac
aatttggaagcaattgatttactcttctcctcaaacttcatcaatgtccccaactttgac
atactactgagtcagctaatggacaatgggaataactatttggctgtggcatttgcaatg
caactcattcagcatttttgcattgaggagcgtcaggcgacggtactcacggagaatgat
tttgtcaatacgattgatctcctaacgcgcatttcggtgcatcatcatcgtgcccccgag
ggcttaccgcacctcattgagattctccgtctcaatcaggatccgaataatctcctttcg
attgaacgtatgcagaatccgcacattaattcgggcattgtgcaggtgcgcaatacaaat
gaaatggaagatccaccggggttgataagcaaaacggagtatctgctgaaggattgggtc
aacatttaccacaatcaagcactcaatcgggatccaatgaaagttttcgggatgtttgtg
gggaaaatgaatatttgtgggatactcaagacggatgatctcattacgcgcttcttccgt
caggccacgcagctgtgcattgatgttgtgtacacgaatatcaatgaagtgaataatatg
ccaacagtgggtaaatcaaagtgtttccaatggattgatgcctttgtgcgtctcattgcg
ctccttgttaagcactcgggggataatgggaatgcaacaacaaagattaatctgctgaat
aaagttttgggcattgttgtgggagtcttgcagcaggatcaggaagttcgtggtgttgca
ttccaacagcttggctatcatcgtctcttcatcatgctcttccttgagttgagtaatccc
gagccagtcctggagaatattagtcttcacgaaggcctttcccaacagactgtcacagct
ttctgccacacatatcacctcataaggccctccgtggccccgggcttctgctactcgtgg
ctggaattgatttcccatcgtgtcttcattgggcgtgtgctggcgatgatcccgcagcag
aagggttggtcaatgtattcgcaactcctgatggatctctttaagtatctcgccccattc
ttgcggaatgctgaactcgcaaaacccgtcacattgctgtacaagggtacactccgggtg
ctccttgtgctcctgcatgatttcccggaattcctgtgtgatcatcattttggcttttgc
gatgcaatccccccgaattgcattcaaatgcgcaacattatcctttcggcctttccgcgc
aatatgcgcctcccggacccattcacgccgaatctcaaggtggatatgctgagtgagatt
tccacggcaccgagaattttcacaaattacgtatcaaacatccaaccggcgacattcaag
aaggacctcgattcgtacttgaaagcccgggcacccgtgacgttcctgtcggaactcagg
gggcacctacaggtgtccaatgagcctggctcgaggtacaatatccccctaatgaatgcc
ctcgtactctatgttgggaatcaagcgatcacactcattcgatcgaaaaatctcgtcccg
aatatgacaacaatcgtccacagtgctcacatggatattttccagaatttagcagtggat
ttggataatgagggaaggtatctcttcctcaatgcagttgccaatcaactacgctatccc
aacagtcacacgcactacttcagctgtgtcctcctctacttgtttgtcgaggcaaattct
gaagcaattcaggaacaaataacaagagttcttctggagcgtctcattgtcaatcgccca
catccatggggtttgctaattaccttcattgagctcataaagaatcccgtctacaaattc
tgggatcatgattttgttcactgcgcccctgaaattgaaaagctctttgagtccgtggca
cgctcgtgtatggttgtgaagacaaacaatcagcagacactgaacagcgtcgaggcggaa
ctgcaggagtgcaactga
DBGET
integrated database retrieval system
