KEGG   Lineus longissimus (bootlace worm): 135496880
Entry
135496880         CDS       T09977                                 
Name
(RefSeq) Y-box factor homolog
  KO
K09276  Y-box-binding protein 1
Organism
llon  Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:llon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:llon03000]
    135496880
   03019 Messenger RNA biogenesis [BR:llon03019]
    135496880
   03041 Spliceosome [BR:llon03041]
    135496880
Transcription factors [BR:llon03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, YB-1/DbpB-like
    135496880
Messenger RNA biogenesis [BR:llon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     135496880
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     135496880
Spliceosome [BR:llon03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    135496880
SSDB
Motif
Pfam: CSD OB_RNB
Other DBs
NCBI-GeneID: 135496880
NCBI-ProteinID: XP_064642519
LinkDB
Position
12:complement(17536016..17540310)
AA seq 295 aa
MSDSEKSAEKEPAAVEKKLIAEKVTGTVKWFNVKSGYGFINRDDTKEDVFVHQTAITKNN
PRKYLRSVGDGEKVEFDVVEGEKGNEAANVTGPEGNAVQGSKYAPEGRRFRGGGWGRRGG
FRRGGKRKEEGQGDGEEGEEGEESEEGDEKKQKGGRPRGRRPYYGYGGYYPRPYFYRGRG
GGQRGKPVKEGEENGESNGEERQVRQGGRGRPPYGWYPRYYNAPRHYGPPGPFGFPRRGR
GGFRGRGRGGRGRGGRGRGRGNYNNTEKGEGEKSESTGEEGGQTGENAEEGQTSV
NT seq 888 nt   +upstreamnt  +downstreamnt
atgtccgactcagaaaaatcagctgagaaagaacccgctgccgtggagaagaaactcata
gcggaaaaagtgactggtacggtcaaatggttcaacgtcaagagcggatatggctttatc
aaccgggatgacaccaaggaagatgtgttcgtacatcaaacggccatcactaagaacaat
ccccggaaatacctaaggagcgtgggagatggtgagaaggtcgaattcgacgtagtggaa
ggggagaagggcaacgaggcggcaaacgtcactggacctgaagggaatgctgtgcaagga
agcaagtatgcgccagagggtcgtcgtttccgtggcggtggatggggtcgccggggcggc
ttccgtcgtggcggcaagcggaaggaggaaggccagggcgatggtgaagagggagaggag
ggcgaagaaagcgaggagggcgatgaaaagaagcagaaaggaggccgaccaaggggaaga
cgtccttactatggttacggtggatactacccaagaccttacttctaccgtggacgtggt
ggcggccagaggggcaagcctgtgaaggaaggagaggagaatggtgagagcaatggagag
gagcgtcaagttcgccagggaggtcgaggtcgcccaccatatggctggtacccccgttat
tacaacgcaccaaggcactacggcccacctggcccgttcggattcccacgacgagggcgt
ggtggattccgtggacgtggaaggggtggtcgtggtcgtggtggacggggacggggacgt
ggaaactacaacaacaccgagaagggagaaggagagaagtctgaatccactggagaagag
ggaggacaaaccggagaaaacgctgaagaaggccagaccagcgtttag

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