Lineus longissimus (bootlace worm): 135502103
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Entry
135502103 CDS
T09977
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135502103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135502103
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
135502103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_1
TPR_2
TPR_16
TPR_11
TPR_17
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_6
ANAPC3
ARM_TT21_C
ChAPs
TPR_9
ARM_TT21_N
TPR_MalT
Fis1_TPR_C
AAA_lid_BCS1
TPR_30
ARM_TT21_2nd
DUF5588
Motif
Other DBs
NCBI-GeneID:
135502103
NCBI-ProteinID:
XP_064650742
LinkDB
All DBs
Position
2:3692569..3704647
Genome browser
AA seq
1519 aa
AA seq
DB search
MDKEAKAALKQAREAIRSKEYKEALQHCKTVLKHDKNNYNAFVFIGVAAEGVDEHDQALK
AYTKAAEISPEQVLAWQGLAGFYEKQDKKEYKEHQVTVYKKLIELQSSDQTKCFENKLKM
GQAYEAMDSCEEAVSIYQDLVESKQDDDAKKTVWQRLVGLLEKQKTLSPGNTELLVQAYE
VVLMPGKADEDLVKTWMNYIKCLVKGKCDASKLLARCEEMISVYPEESYPVEILLLIKLD
RYKAENQTEEDFIELSKKLENSKPDSAVLKIVQGFLHLQRKEYLPAQDLLQNGLNGFPQS
VMGWLLLTETQLRLHDPSGLELSMEKVQKVSSKKDCFCTVEKDNLLQRSRLNYANVFLDV
GDKKSVSEAINQCQKLLDEKFEKENVFVCLAYGYLLNADISQAREIVNKLASSKSASVVA
LQGWLLFNTDIYDEAIQCVQNAIDLDGKNGYYHYQLGRILWAQMKAGQEINKQDCLAEFI
KAAKLDPYYSDTFLYLGHYYSTIGNDKQRASRCYQKSYDLKGTSDEVGIALVDCLNAIGE
ESTALKVLTSVTSQASAGSAKWAWLRLGLHHLKFNDPTTAVTCLQSALRADPNDYHGWEC
LAEAYLSRGSFTAALRTFTKATELCPDSMYSLYQIAAIKQRLGLHAEAVVDYNNVLVKFP
DYVPALKGLGETQVNLAGSALHSYFNRKAVDLCEEAVWNLTRAATHRPDLACLWKLMADA
CTMVAPVSSSTGIMKLPKKLNCPSASLDESVVVDKCEVLAIGAKCYGYALKVLPEDASLW
HDLGVNFYRQSQNVSSEKEVQELCHKSTQVLKKAICMDQNRHLYWLALGVVSLSSVINDV
PLAQHCFIKSIQVESNNVMAWTNLGVLYLKHGKIELAHEAFKVAQSVDPAYVQCWIGQAL
IAETVGHDDAMDLFRHTSGLSVHVESGIGYASWVCSALQGTFKLSEDLYAYCIERMGAVP
TACDAMAKYCDRVCTNPAAFTIYGMLLERQGLLRSALNSYASAVKLLESADDMLHLNMAR
SNYGRILCALGSADEAVKQYQAISPLESFEDVCGLALSYYKAGSWEDSSNAYTQAIELAT
SDEDKSHVFAALGMVSYKLRDVERAKTALFRCSQTSKPSIPGLLALCSIGLLQSDSTLVA
AVLQELEKLTQIPSDHLVDVTYLTATLYVLMGDPATAKNTIMKQIHRYPNQPELWILLSQ
HLSSRSPQDSLGAAICAQVAYCKDNTLKDVSATITKGSLTAGLFSQTDTDQNAFYTAQKA
LHRNPHRLDYRCDMLAALFGETMVQQSRGTANKSMMNLLIAYSKGLLQIAENEMGSNPSP
ESTAVHLWCVKHYILALMCAGKLDQAKAMTEAALSLYQDADLPTLLAVSKNFMLDISNIS
DQGSYSVKLAVEYYLSRGLLDEVEALLKQAIQSSPHKKDKLGALLQFQHLSYRQILGRGP
PKWSSVFMDAAAEVLRIDPNSSVSHLMRGLVRFKQTGMRVAKRHFVDVAKGDHGSLGQAG
RIAEEILAEHAPSKSNENN
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggaggctaaagctgccttgaaacaagccagagaagcaatcagaagtaaagag
tataaagaagcattgcagcattgcaagactgtcttgaagcatgacaagaacaactacaat
gcctttgtcttcatcggagtggctgcagagggggtcgatgagcatgaccaagctctaaag
gcatatactaaggcagcagagatctcccctgaacaggtcttggcttggcaaggtctggct
ggattttacgagaaacaagacaagaaagaatacaaagaacaccaagtgacagtgtataaa
aaactcatagaattacaatcaagtgatcagacgaaatgttttgaaaacaaactaaagatg
ggacaggcatatgaggccatggacagctgtgaagaggccgtttcaatctatcaagacttg
gttgagtccaaacaggatgatgatgccaaaaaaacagtttggcaaagactggttggtctg
ttagaaaagcagaagactctgtcaccaggaaatacagaactgttggtgcaggcatatgaa
gtggtgctcatgccaggaaaagctgatgaagacttggtgaaaacatggatgaactatatc
aaatgtctagtcaagggaaagtgtgatgcttcaaagctcctggcacgttgtgaggagatg
atttctgtttatccagaagaatcctaccctgtggaaatattactcctgattaaactggat
agatacaaagctgaaaaccaaacagaagaagatttcatagaactgagtaaaaaacttgaa
aattccaagcccgattcagcagtattgaagatagttcaaggctttctacacttgcaaagg
aaggaatacctcccagcacaagatctactacaaaacggacttaatggctttccacaatct
gtcatgggttggttgctgctaacagagacacaacttcgccttcatgatccaagtggtctt
gagttgagcatggaaaaagtgcaaaaggtttcatccaagaaagactgcttctgcactgtt
gagaaggacaacctgcttcaaagaagtagactaaactatgccaatgtcttcctggatgtt
ggagataagaaatcagtgtctgaagctatcaaccaatgtcaaaagctacttgatgagaag
tttgagaaggagaatgtttttgtctgcctcgcttatggctacctcttgaatgctgacatc
agccaagcaagggaaattgtcaacaagttggccagttccaagtctgcatcagttgtggcc
ctacaaggatggttactgtttaatacagacatttatgatgaagcaatccaatgtgttcaa
aatgccatcgatcttgatggaaaaaatgggtactatcactatcaacttggtaggatatta
tgggcgcagatgaaggctggccaagagatcaacaaacaagactgtcttgctgaatttatc
aaggctgccaaacttgatccatactacagtgacacgttcctttatctcggccactactac
agcactattggcaatgataaacaaagggcgagcaggtgttaccagaagtcttacgacctg
aagggaaccagtgatgaagtgggtatcgcccttgtcgattgtttgaatgcaattggagag
gaaagtactgccttgaaggttttgacatcagtgactagtcaagcaagtgctggaagcgca
aagtgggcttggctgcgacttggtctgcatcacttgaagttcaatgacccaacaactgct
gtgacgtgtctacagtccgcactgagagctgacccaaatgactatcatggttgggagtgt
cttgctgaggcatacctgagccgaggcagcttcacggctgctctgaggacattcaccaaa
gccacagaactctgtccagactctatgtacagcttgtaccagattgctgctatcaagcag
aggcttggcctacatgctgaggctgtggtggactacaacaatgtattggtcaaatttccg
gattatgtacctgcattgaaaggcctcggtgaaacacaggtcaatcttgctggttcagcg
cttcattcatatttcaatagaaaagctgttgatctctgtgaggaggctgtttggaacctg
acgagagctgctacacaccggccggacctggcatgtctctggaagctgatggctgatgca
tgtacaatggtggcaccagtgtcttccagtactggaataatgaagttaccaaagaaactg
aattgtccaagcgcatcacttgatgaatcagtggtcgtcgacaaatgtgaagtgttggcg
attggagccaaatgttatggatacgccttgaaagtcttgccagaggatgcctccctctgg
catgaccttggggtgaacttttaccggcagtcgcagaatgtttcatcagaaaaagaagtc
caagaattatgtcacaagtcgacacaggtgttaaagaaggccatttgtatggatcagaac
aggcatttgtactggcttgcactgggtgtggtgtctctttcatcagttataaatgatgtt
ccactggcacagcattgtttcatcaagtccatacaagttgaaagtaataatgtcatggca
tggaccaatctaggagtcttatatctgaaacacggtaaaattgagcttgcccatgaggca
ttcaaggtagcccagtctgttgatccagcatacgtgcaatgctggatcggtcaagcgctc
attgcggagactgtcggtcacgatgatgctatggacctgttccgccacacaagtggactc
tctgtgcatgttgagagtggtattggctatgccagttgggtttgctcagccctccaaggc
acatttaagctcagtgaggacctctatgcctattgtattgaaaggatgggagctgtacca
actgcttgtgatgcaatggctaaatactgcgatcgagtgtgtacgaaccctgcagccttt
actatctatggcatgttattggaaagacagggacttctcagatctgcgctaaattcatat
gcgagtgctgtcaagttactggagtcagcggatgatatgttgcatttgaacatggctagg
tcaaattatggacgcatcctttgtgctcttggttcagcagatgaagccgtgaaacagtat
caagccatcagtcctttagagagctttgaggatgtgtgtggactggccttgagctactac
aaggcagggagctgggaggacagttctaatgcttacacccaggcaattgagttggccaca
tcagatgaagacaagtcccatgtctttgctgcccttggtatggtatcttacaaactgaga
gatgtagagcgtgcaaagactgctctgtttagatgctcacagaccagtaaaccatctata
ccaggcctactggctctgtgcagtattggcctgctgcagtccgattctaccctggtggct
gctgtccttcaagaacttgaaaagttgactcaaattccttcagatcatcttgttgatgtg
acataccttactgccacactttatgtcctcatgggtgaccctgccactgcaaaaaatacc
atcatgaaacagatacaccgatacccaaatcagccagagctttggattttactctcacaa
cacttatctagtcgcagcccccaagacagccttggggcagctatttgtgcgcaagttgca
tattgtaaagacaacacacttaaggacgtatctgctaccattaccaaggggagcctgaca
gctggcttattctcacagacggatacagatcagaatgccttctatactgcacagaaagca
cttcatcggaatccacatcgcctggactaccggtgcgacatgctagcagccctctttggt
gagactatggttcaacaaagccgtggtactgctaacaagtctatgatgaatctactgata
gcctacagtaaaggactgttacaaatagcggaaaatgagatgggaagcaacccaagtccc
gagtcgactgccgtccatctttggtgtgttaaacattacatccttgctctgatgtgtgcc
ggcaaattggatcaagcaaaagctatgacagaagctgctctttctctgtaccaggatgct
gatctaccaacattgcttgcagtttctaaaaacttcatgttggatatctcaaatatttct
gaccagggatcatattcggtgaagctggctgtggaatattatctctccaggggcctcctg
gatgaagtggaagcattactcaagcaggccattcagtccagtccccacaagaaagataaa
cttggtgcacttcttcagtttcaacatttgtcatatcggcagatattaggacgaggtcct
ccaaaatggtcgtccgtcttcatggatgcagccgcagaggtgctacgtatcgatccaaac
tcatctgtctcacatctgatgcgcggactggtccgattcaaacaaacaggcatgagggtt
gcgaagaggcatttcgttgatgttgcgaaaggagaccatggcagtcttggccaagcagga
aggattgctgaggaaattcttgcagaacatgctccaagcaagagcaatgagaataattaa
DBGET
integrated database retrieval system
