Labilithrix luteola: AKJ09_07388
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Entry
AKJ09_07388 CDS
T04033
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
llu
Labilithrix luteola
Pathway
llu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKJ09_07388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llu03019
]
AKJ09_07388
03009 Ribosome biogenesis [BR:
llu03009
]
AKJ09_07388
Enzymes [BR:
llu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AKJ09_07388
Messenger RNA biogenesis [BR:
llu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AKJ09_07388
Ribosome biogenesis [BR:
llu03009
]
Prokaryotic type
rRNA helicases
AKJ09_07388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UTP25
Motif
Other DBs
NCBI-ProteinID:
AKV00725
UniProt:
A0A0K1Q5R6
LinkDB
All DBs
Position
complement(7771110..7773371)
Genome browser
AA seq
753 aa
AA seq
DB search
MTTIAARELMGTGLASALEAKGYTSLTQVQEAVLDPALAGRDLRISSQTGSGKTVAIGLT
IREAANGPSPGEDGKAKPRALVIAPTRELAKQVEDELTWLFEPLRAGVASVTGGASYRDE
RRAFARGPAILVGTPGRLLDHLERGGVDPSAIQTIVFDEADRMLDLGFRETLEAIIGYAP
ADHRTHLVSATFPREVKALADSVQNDPAHVEGTPLGTANADIEHVVHVVDSDDRLAAMIN
LLLAEEAGQTLVFARTRADVAEITQLLGDAGFRVASLSGEMEQRERNRALSAFKRGDLHA
LVATDVAARGIDVQDIVRVIHAEPPSDPESYTHRSGRTGRAGRKGTSSILVTPPALNRTR
SLLTRARVRFRFQPIPTSESIRAAADERLFSAITTEGSELDVRTTALAERLAANGDVTTT
IARLLAKVGSQAPAEPREVRRIDPSERPERAGRDRDRDRDGGRDRGPRAPREERAMRGEG
GWVPFRVTWGKLHGADPRRLLAMVCRRGGIRGSDVGAIDIQRNFSVVDVASAAAGSFARA
AGMRDPRDPRVLISPLSDAPPNVSRREPREFVRPEPEQAAPFVADRPSKPLFDKDRPSAP
VVIEAERPSKARIERERPSKTLLEDHAAKPLFEKDRASKPIVERPPPPHVDRERAPKTRV
VDIERPAYRDRQGPAKPRYEGTAKPRYEGTAKPRYEGTAKPRHEGPAKPRHEGPAKPRHD
GPGKPHAPKHRAHGGPSRGPVGGQGPLKRRKKP
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgatcgcagcacgcgagctcatgggtaccgggctcgcgagcgccctcgaagcc
aagggctacacatccctcacccaggtccaggaagctgtcctggatcctgccctggcgggg
cgcgatctgcgtatcagctcgcaaacgggctccggaaagaccgtggccatcgggctcacg
atccgagaagccgcgaacggcccctctcccggcgaagacggcaaggcgaagccgcgtgct
ctcgtcatcgcgccgacgcgcgagctcgccaagcaagtggaagacgagctgacgtggctc
ttcgagccgctccgtgccggcgttgcatccgtcacgggcggcgcgagctaccgtgacgag
cgccgcgctttcgcgcgcggaccggccatcctcgtcggcacgccagggcgtctgctcgat
catctcgagcgcggcggggtcgatccgagcgccatccaaaccatcgtcttcgacgaagcc
gatcgcatgctcgatctcggcttccgcgagacgctcgaggcgatcatcggctacgcgccc
gccgaccaccgcacgcacctcgtctcggccacgttcccgcgcgaagtgaaggcgctcgcc
gacagcgtgcagaatgaccctgcacacgtcgaaggcacgcctctcggtaccgcgaacgcc
gacatcgagcacgtggtgcacgtggtcgattccgacgaccgactcgccgcgatgatcaat
ctcctgctcgccgaggaagcgggccagacgctcgtgttcgcgcgcacgcgcgccgacgtc
gcggagatcacgcagctcctcggcgatgcggggttccgtgtggcgtcgctctccggcgag
atggagcagcgcgaacgcaaccgcgccctgtccgccttcaagcgcggcgatctgcatgcg
ctcgttgcaaccgacgttgcggcgcgcggcatcgacgtgcaggacatcgtgcgcgtcatt
cacgccgagccgccgagcgatccggaatcgtacacgcaccgaagcggccgaacgggacgc
gctggccgcaaaggcacgagctcgatcctcgtcacgccgcctgcgctcaaccgcacgcgc
agcctcctcacgcgcgcgcgcgttcgcttccgtttccagcccatccccacgtcggagagc
atccgcgcggccgccgacgagcgactcttcagcgcgatcacgaccgagggctccgagctg
gacgtgcgcacgacggccctcgccgagcggctcgccgcgaacggcgacgtgacgacgacc
atcgctcgcctcctcgccaaggtgggctcacaggcgcccgccgagccgcgcgaggtgcgc
cgcatcgacccgagcgagcgccccgagcgcgcgggtcgcgaccgtgatcgcgatcgcgac
ggcggacgcgaccgcggcccgcgggctcctcgcgaggagcgcgcgatgcgcggcgaaggc
ggctgggttcccttccgcgtcacttggggcaagctgcacggcgccgatccgcgtcgcctg
ctggcaatggtgtgccgccgcggcggtattcgcggaagcgacgtcggcgcgatcgacatc
cagcgcaacttctcggtcgtcgacgtggcgagcgccgcggctggcagctttgcccgcgcc
gccggcatgcgcgatccgcgcgatccccgcgtcttgatcagccccctcagcgacgcgccg
ccgaacgtctctcgtcgcgaaccgcgcgagttcgtgcgtcccgagcccgagcaagccgcg
cccttcgtcgccgatcgcccctccaagccgctgttcgacaaggatcgtccctcggcgccg
gtggtgatcgaggccgagcgcccttcgaaggcgcgtattgaacgcgagcggccgtcgaag
acgctcctcgaagatcatgcggcgaagccgctcttcgagaaggaccgcgcgtcgaagccg
atcgtcgagcggccgcccccgccccacgtcgaccgcgagcgcgctccgaagacgcgcgtc
gtcgacatcgagcgcccggcctatcgcgatcgccagggtccggccaagccgcgctacgaa
ggcaccgccaagccgcgctacgaaggcaccgccaagccgcgctacgaaggcaccgccaag
ccgcgtcacgaaggcccggccaagccgcgccacgaaggcccggccaagccgcgccacgac
gggcccggcaagccgcacgccccgaagcaccgcgcgcacggcggaccgagccgcggtcct
gtcggtggccaaggcccgctcaagcgacgcaagaagccctga
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