Labilithrix luteola: AKJ09_08503
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Entry
AKJ09_08503 CDS
T04033
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
llu
Labilithrix luteola
Pathway
llu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
llu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AKJ09_08503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llu03021
]
AKJ09_08503
Transcription machinery [BR:
llu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AKJ09_08503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_ner
Motif
Other DBs
NCBI-ProteinID:
AKV01840
UniProt:
A0A0K1Q8V2
LinkDB
All DBs
Position
8920703..8922469
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AA seq
588 aa
AA seq
DB search
MANKNRNGNGKDTQQLMENGKSKGFLTYDEVNESMPADVVADQMDDVMSVLGDEDIEIVD
AATQVKIAPKRIVEEENAEKKNVPRAGGEKEEDDGSYYSKSNDPVRMYLRKMGSVALLTR
EGEVEIAKRIEQGEHMILGAILNSPVAVREIIDLGDKLRKHKIRVKEIIRDADDENAEFD
EEEADRRILRLIDKVKHLDKVAQDLVAQLEASAAGRKKGVQEEIEANRSKMVETLEEMRL
NKKTIDKIVLKLRTLIQKVERAESGSTELEKRTGVDWDVLRKEARAAKGDANGERKFKRK
FGIAPEEVLQNHSASLKNLKKVEEELQLDIKALRDTYHEIYTGERLAEKAKAELVSANLR
LVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAITRAIAD
QARTIRIPVHMIETINKLIRTSRYLVQEYGREPTPEEIAEKMELPLDKVRKVLKIAKEPI
SLETPIGEEEDSHLGDFIEDKSIISPQENVINANLAEQTRKVLKTLTPREEKVLRMRFGI
GEKSDHTLEEVGQDFEVTRERIRQIEAKALRKLRHPSRSKQLKSFIES
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaagaaccggaacggcaacggcaaagacacccagcagttgatggagaacggc
aagtcgaaggggtttttgacctacgacgaagtcaacgagtcgatgccggcagacgtcgtc
gccgatcagatggacgacgtgatgagcgtcctcggcgacgaggacatcgagatcgtcgac
gcggcgacgcaggtcaagatcgcgccgaagcggatcgtcgaagaagagaacgccgagaag
aagaacgttccgcgcgccggcggcgaaaaagaagaagacgacgggagctactactccaag
tcgaacgacccggttcgtatgtacctccgcaagatgggaagcgtcgcgcttctcacgcgt
gagggagaagtcgagatcgccaagcgcatcgagcaaggcgagcacatgatcttgggcgcg
atcctcaactcgcccgtcgccgtccgcgagatcatcgacctcggagacaagcttcgtaag
cacaagattcgcgtcaaggagatcatccgcgacgccgacgacgagaacgccgagttcgac
gaggaggaggctgatcgccgcatccttcgcctcatcgacaaggtcaagcacctcgacaag
gtcgcccaggacctcgtcgcgcagctcgaggcgtccgccgcgggccgcaagaagggcgtc
caggaagagatcgaggccaaccgctcgaagatggtcgagacgctcgaagagatgcgtctg
aacaagaagaccatcgacaagatcgtcctcaagctccgcacgctgatccagaaggtcgaa
cgcgccgagagcggatccaccgagctcgagaagcgcaccggcgtcgactgggacgtgctc
cgcaaggaagcgcgcgcggccaagggcgacgcgaacggcgagcgcaagttcaagcgcaag
ttcggcatcgcgcccgaggaggttctccagaaccactcggcgagcctcaagaacctgaag
aaggtcgaagaggagcttcagctcgacatcaaggcgctccgcgacacgtaccacgagatc
tacacgggcgagcgcttggccgagaaggcgaaggcggaactcgtctcggcgaacctccgt
ctcgtcgtctcgatcgcgaagaagtacacgaaccgcggtctgcagttcctcgacctgatc
caggaagggaacatcggcctcatgaaggccgtcgacaagttcgagtacaagcgcggttac
aagttctcgacctacgcgacgtggtggatccgtcaggccatcacccgcgcgatcgccgat
caggcgcgcaccatccgtatcccggtgcacatgatcgagacgatcaacaagctcattcgc
acctcgcgttacctcgttcaggagtacggccgcgagccgacgccggaagagatcgccgag
aagatggagctgccgctcgacaaggtccgcaaggtcctcaagatcgccaaggagcccatc
agcctcgagacgccgatcggcgaagaggaagattcgcacttgggcgacttcatcgaggac
aagagcatcatctcgccgcaggagaacgtcatcaacgcgaacctcgcggagcagacccgc
aaggttctcaagacgctcacgccgcgtgaggagaaggtcctccgtatgcgcttcggcatc
ggcgagaagagcgaccacaccctcgaagaggtcggccaggacttcgaagttacccgcgag
cgtatccgccagatcgaggcgaaggcgcttcgcaagctccgtcacccgtcgcgcagcaag
cagctcaagagcttcatcgagagctga
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