Lutra lutra (Eurasian river otter): 125083453
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Entry
125083453 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04141
Protein processing in endoplasmic reticulum
llv04210
Apoptosis
llv04217
Necroptosis
llv04218
Cellular senescence
llv04382
Cornified envelope formation
llv05010
Alzheimer disease
llv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125083453
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125083453
04217 Necroptosis
125083453
04218 Cellular senescence
125083453
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125083453
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125083453
05022 Pathways of neurodegeneration - multiple diseases
125083453
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
llv01002
]
125083453
Enzymes [BR:
llv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
125083453
Peptidases and inhibitors [BR:
llv01002
]
Cysteine peptidases
Family C2: calpain family
125083453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
125083453
NCBI-ProteinID:
XP_047556011
LinkDB
All DBs
Position
13:complement(19067256..19070199)
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AA seq
715 aa
AA seq
DB search
MAEELIPPVYCTGVSAQVQKQWAKDLGLGHHENAIKYMGQDYKQLRAHCLQSGALFCDEA
FPPVPQSLGYKDLGPISSKTYGIKWKHPTELLSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQNGYAGIFHFQLWXFGEWVDVVVDDLLPMKDGKLVFVHS
XQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTQWYELRKAPSDLYQIILK
ALERGSLLGCSTDISSVLDMEAVTFKKLVKGHAYSVTGAKQVNYQGQMVSLIRMQNPWGE
VEWTGAWSDGSSEWNSVDPYEREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKS
RSIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEETDDADDDYGGRESGCSF
VLALMQKHRRRERRFGRDMETIGFAVYEVPPELVGQPAVHLKRDFFLANSSRARSEQFIN
LREVSTCFCLPPGEYVVVPSTFEPNKEGDFMLRFFSEKSAGTQEMDDQIQANLPDEQVLS
EEEIDASFKTLFRQLAGEDMEISVKELQTILNRIISKHKDLRTKGFSLESCRSMVNLMDR
DGNGKLGLVEFNILWNRIRNYLSIFQKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELI
IARYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLHLTMFA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagctcatcccccccgtgtactgcaccggggtgtctgctcaagtgcagaag
cagtgggccaaggatctgggccttggccaccatgaaaacgccatcaagtacatgggccaa
gactataagcagctgcgggctcattgcctgcagagtggggccctcttttgtgacgaggct
ttccccccggtgccccagagcctaggctacaaggacctgggccccatctcctccaaaacc
tatggcatcaagtggaagcatcccacggagctgctctcgaatccccagttcattgtggat
ggagccacccgcacagacatctgccagggagccctgggggactgttggctcctggctgcc
attgcttccctcaccctcaatgacacgcttctgcatcgagtggttccacacggccaaagc
ttccagaacggctatgccggcatcttccatttccagctgtggtagtttggggagtgggtg
gacgtggtcgtggatgacctgctgcccatgaaggatgggaagctggtgtttgttcactct
ngccaaggcaacgagttctggagtgccctgctcgagaaggcctatgccaaggtgaatggc
agctatgaggccctctctgggggcagcacttcagaaggctttgaggacttcacaggcggg
gtcacccagtggtatgagctgcgcaaggcacccagcgatctctaccaaatcatcctcaag
gccctggagcgggggtccctcctgggctgctccactgacatctccagcgttctggacatg
gaggccgtcaccttcaagaagctggtgaagggccacgcctactctgtgacaggggccaaa
caggtgaactaccagggccagatggtgagcctgatccggatgcagaacccctggggcgag
gtggagtggacgggagcctggagtgacggctcctcggagtggaacagcgtggacccttac
gaacgggagcagctccgggtgaagatggaggatggagagttctggatgtccttccgggac
ttcatgcgtgagttcacgcgcctggagatctgcaacctgacgcctgatgctctcaagagc
cggtccatccgcaagtggaacacgacgctgtacgagggcacctggcggcgggggagcact
gcgggcggctgccggaactacccagccaccttctgggtcaatccccagttcaagatccgg
ctggaggagacggatgatgcagacgacgactacgggggtcgcgagtcaggctgcagtttc
gtgctcgccctcatgcagaagcaccgacgccgcgagcgccgctttggccgggacatggag
accattggcttcgcggtctacgaggtccctccggagctggtgggccagcccgcagtgcac
ctgaagcgggacttcttcctggcgaactcgtcgcgggcgcgctcagagcagttcatcaac
ctgcgggaggtcagcacctgcttctgcctgccgcctggggagtacgtggtggtgccctcc
accttcgagcccaacaaggagggggacttcatgctgcgcttcttctcggagaagagcgcc
gggacccaggagatggacgaccagatccaggccaatctccctgatgagcaagtgctctca
gaagaggagattgacgcgagtttcaagaccctcttcaggcagctggcaggggaggacatg
gagatcagcgtcaaggagctgcagaccattctgaacaggatcatcagcaaacacaaggac
ttgcgtaccaagggcttcagcctggagtcgtgccgcagcatggtgaacctcatggaccgg
gacggcaacgggaaactgggcctggtggagtttaacatcctgtggaaccgaatccggaat
tacctgtccatcttccagaagtttgacttggacaagtcgggcagcatgagcgcctacgag
atgcggatggctattgagtctgcgggtttcaagctcaacaagaagctgtatgagctcatc
atcgcccgctactcggagccagacctggccgtggacttcgacaacttcgtgtgctgtcta
gtgcggctggagaccatgttccgatttttcaaaactctggacacggatctggatggtgtc
gtgacctttgatctgtttaagtggttacacctgaccatgtttgcatga
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