Lutra lutra (Eurasian river otter): 125087842
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Entry
125087842 CDS
T08100
Name
(RefSeq) retinoic acid receptor alpha isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04659
Th17 cell differentiation
llv04915
Estrogen signaling pathway
llv05200
Pathways in cancer
llv05202
Transcriptional misregulation in cancer
llv05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
125087842
09152 Endocrine system
04915 Estrogen signaling pathway
125087842
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125087842
05202 Transcriptional misregulation in cancer
125087842
09162 Cancer: specific types
05221 Acute myeloid leukemia
125087842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125087842
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
llv03310
]
125087842
Transcription factors [BR:
llv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125087842
Nuclear receptors [BR:
llv03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
125087842
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125087842
NCBI-ProteinID:
XP_047564516
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Position
16:complement(21830160..21874677)
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AA seq
473 aa
AA seq
DB search
MTSPPGPLVFAGKMYESVEVGGLTPPPIPSLWWIFITRTGPVCSRRRGSPPLVPTPPRSG
LRFGMAQTTVAIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCK
GFFRRSIQKNMVYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEA
PKPECSESYTLTPEVGELIEKVRKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFS
ELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDG
LTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVD
MLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPL
IQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacttccccgcccggacctcttgtcttcgcggggaagatgtacgagagtgtggaagtg
ggggggctcaccccacccccaatcccttccttgtggtggatttttataaccagaaccggg
cctgtttgctcccggagaaggggctccccgcccctggtccctactccaccccgctccgga
ctccgctttggaatggctcaaaccactgtagccatcgagacccagagcagcagttccgaa
gagatagtgcccagccctccctcgccgccccctctcccccgcatctacaagccttgcttt
gtctgccaggacaaatcctcaggctaccactatggggtcagtgcctgtgagggctgcaag
ggcttcttccgccgcagcatccagaagaacatggtgtacacgtgtcaccgggacaagaac
tgcgtcatcaacaaggtgacccggaaccgctgccagtactgccgactgcagaagtgcttt
gaagtgggcatgtccaaggagtctgtgaggaacgacagaaacaagaagaagaaggaggcg
cccaagcccgagtgctccgagagctacacgctgacacctgaggtcggggagctcatcgag
aaggtgcgcaaagcgcaccaggaaaccttccctgccctctgccagctgggcaaatacact
acgaacaacagctcagagcaacgtgtctctctggacattgacctctgggacaagttcagt
gaactctccaccaagtgcatcattaagactgtggagttcgccaagcaactgcccggcttc
accaccctcaccattgctgaccagatcaccctcctcaaggctgcctgcctggacatcctg
atcctgcggatctgcacgcggtacacgcccgagcaggacaccatgaccttctccgatggg
ctgaccttgaaccggacccagatgcacaatgccggcttcggccccctcacggacctggtc
ttcgccttcgccaaccagctgcttcccctggagatggatgatgctgagactggtcttctc
agtgccatctgtctcatctgtggagaccggcaggacctggagcagccagacagggtggac
atgcttcaggagccgctgctggaggcgctgaaggtctatgtgcggaaacgaaggcccagc
cgcccccacatgttccccaagatgctgatgaagatcacagacctgcgaagcatcagtgct
aagggggctgagcgggtgatcaccctgaagatggagatcccgggctccatgccacctctc
atccaggaaatgctggagaactcggagggcctggacactctgagcggacagccagggggt
ggggggcgggatgggggcggcctggcccccccacccggcagctgtagccccagcctcagt
cccagctcgaacagaagcagcccggccacccactccccgtga
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