Lutra lutra (Eurasian river otter): 125093503
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Entry
125093503 CDS
T08100
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125093503
Membrane trafficking [BR:
llv04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125093503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_1
TPR_8
SH3_2
TPR_2
SH3_9
TPR_1
Csd3_N
TPR_10
Motif
Other DBs
NCBI-GeneID:
125093503
NCBI-ProteinID:
XP_047574716
LinkDB
All DBs
Position
2:complement(143710052..143759451)
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AA seq
1335 aa
AA seq
DB search
MEGPVEEPAPEGRGPTAAPSGGSGGGGHKVPRVAMGASVVWERAGPEEAKAVVGGDATPP
PGGSGPAAGTPPVQMGTYPTDLTLQLLAVRRKTGLLDPSLQQTVRSRLRLLENDSLEVAR
ALGELSARLLSIHSDQARIVVTFKTFEEIWKFSTYHALGFTHHCLENLLVDQAFWLLSPS
EDEETAVHVHVDQEALIRTHESLLAQEGPFFVLCPDHRVRVKTSPQGAGSGPQALRRASR
VLQGEAAPALDPSAPGSSTSSEDMAAAAAPETLIPFHQWALRVPWDPIDDSVSGPVTSDI
PLMATGLATAVADYQGSGPEEMTFCSGDVIEVLGAQVPGLPWCLGRHTASGQVGFVQTSL
ISVQGQVSDLENGIFLNEEERSFFSREGRFSEEDAKQLLRRVSGVDVCTVYSLDRLEEAE
FEQLGDQEMPLPGLHPDPCETLQKVKNVLEQCKSGQGCPEEPVSWGLCMASSGTGSLHSE
EPSFCLDSGADWAHPEVLGSLLLFLDAPAYEACFRGLYDLSLPGLSTLFPGFTDEEELAE
HLAQARGAAKKAGFPMALARLCFLLGRLCVRRLKLSQARVYFEEALGALGGHFGDLFLVV
AVYANLATVHLKQKNRDRCAQVVPKALALLLGTPSHLCSTEAESPLLRLALRRAILCHST
QAEARACFLLAKHHARLKQLEEALPFLERLLLLHGAVGAPEAAWPVDGYLLLADIYGRQC
LPHLALGCVRGASLRARGSPGSALWSVDLVLRNSPRLHRPPAQTALYLRQALASMAPSPS
GALRGLLCASLAQLHSRHGQQATAISFMMQAVDMAMGAGSQLAVDYIVALAWLYVLCGQS
MVALDILESILDMAVANVDQEGMIANMVAVALRRTGRTRQAAEGYYRALRVARAGGQLQN
QAVVLANFGALCLQAGAEGLAQHYHRESVTLFARLPSRECGPDLTWVLLRLGHLYTRRAL
ARQAKCCYEWAFLVAVETDHVEGQLRAVQRLCHFYRTVMPREAQCVVYHEFQLSLARRVA
DKVLEGQLLETISQLYLSLGTERAYKSALDYTKRSLGIFIDLQRKEKEAHAWLQAGKIYY
ILQQNELVDLYIQVAQNAALYTGDPNLGLELFEAAGDIFFNGTWEREKAVSFYRDRALPL
AATTGNQEAELRLYNKLAALLAELELPHEGLEFAHAAVALSITRGDRLNERVAYHRLAVL
HQRLGHGELAEHFYLKALSLCGSPLQFDEETLYYVKVYLVLGDILFYDLKDPFDAAGYYQ
LALAAAVDLGNKKAQMKIYTRLAIIYHNFLLDREKSLFFYQKARTFATELNVRRVNLAPA
RCWGRAPWLVAGPPP
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggagggcccagtggaggagccagccccggaggggagagggcccacggcggcaccctcg
ggaggcagcggtggtggtggccacaaggtcccgagagtggccatgggcgcatcggttgtc
tgggagcgagcagggcccgaggaggccaaggctgtggtcggaggtgatgccactcctccc
cctggtggctccgggccggctgctgggacccctccagtccagatgggcacgtaccccaca
gacctgaccttgcagctattggccgtgcggaggaagacggggctgctggaccccagcctg
cagcagaccgtgaggagccggctccgcctgctggaaaacgacagcctggaggtggcccgt
gcactgggggagttgtcagccaggctgctatctatccacagtgaccaggcacggatcgtg
gtgacctttaagaccttcgaggaaatctggaagttctccacctatcacgctcttggcttc
actcatcactgcctagaaaacctgctcgtggaccaggccttctggctactctcgcctagt
gaggacgaggagacagctgtccatgtccacgtggaccaggaggccttgatacggacgcac
gagagcctcctcgcccaggaaggtcctttctttgtcttgtgtcctgaccaccgtgtgcgg
gtgaagaccagcccccagggtgcagggagcggcccccaggcactcaggcgagcctcgagg
gttctccagggagaggcagccccagcactggacccttctgctcctggctccagcacgtcc
tctgaggacatggcagcagcagctgctccagaaactttgattccatttcatcagtgggct
cttagggtcccctgggaccccatcgacgactctgtgagtggacctgtgacatcagatatc
ccactgatggccacaggcctggccacggcggtggcagactaccagggctccgggcctgaa
gaaatgaccttctgcagcggcgacgtcatcgaggtcctgggcgcccaggtgcccggcctg
ccctggtgcctgggccggcacacggcctcgggccaggtcgggtttgtgcagacgagtctc
atcagtgtgcagggccaagtatctgatctggaaaatgggattttcctgaacgaggaagaa
aggtcattctttagccgcgaagggcgcttttctgaggaagacgccaagcagctactgagg
agggtttcgggtgtggacgtctgcaccgtgtacagcttggacagattagaagaagccgag
tttgaacagctgggagatcaagaaatgcctctgcctggcctgcacccagatccatgtgag
accctccagaaggtgaagaatgttctggaacaatgcaagtccggccagggctgccccgag
gagccagtgtcctggggtctgtgcatggcgtccagtggtacaggctccctgcacagtgag
gagccctccttctgcttggactcgggggctgactgggcccacccagaggtgctgggctca
ctgctgctgttcctggacgcgcctgcatatgaggcctgcttccgtggcctatatgacctc
tccctgccggggctgagcaccctgttcccgggcttcaccgacgaggaggagctggctgag
cacctggcacaggcccggggggcggccaagaaggccggcttccccatggctctggccagg
ctctgcttcctcctggggaggctgtgcgtgcgcaggctcaagctgtcccaggcccgtgtg
tacttcgaggaggccctgggggcactgggtggccactttggcgacctcttcctcgtggtg
gccgtgtatgccaacctagccactgtccacctgaaacagaagaacagggacaggtgtgcc
caggtggtccccaaggccttggccctgctcctgggcacccccagccacctgtgcagcacc
gaggcagagtcgccactcctaaggctcgccctgcggcgggccatcctctgccacagcacc
caggccgaggcccgggcctgcttcctgctggccaagcaccacgcccgcctcaagcagctg
gaggaggccctgcccttcctggagaggctgctactgctgcacggggccgtgggcgcccca
gaggccgcgtggcctgtggacggctacctgctcctggcagacatctacggccgccagtgc
ctgccgcacctggcactcggctgcgtccggggggcctcgctgcgggcccggggctcaccg
ggcagcgcactctggagtgtggacctggtcctccgaaactcaccccggctgcatcggccg
cccgcccagacggcactctacctcaggcaggcgctggcctccatggcccccagcccgagt
ggggcgctgcgtggcctgctctgtgctagtctggcccagttgcacagccgccatgggcag
caggccacagccatctctttcatgatgcaggccgtggacatggccatgggggccggcagc
caactggccgtggactacatagtggcgctggcctggctgtatgtgctttgtggccagagc
atggtggccctggacatccttgagtccatcctggacatggccgtggccaacgtggaccag
gagggcatgatcgctaacatggtggctgtggccctgcggaggacaggcaggacccggcag
gcggctgagggctactaccgtgccctgcgggtggcccgggccgggggccagctgcagaac
caggcggtggtcctagccaactttggggccctgtgcctgcaggccggcgcagagggcctg
gcccagcactaccaccgggaatccgtgacactgtttgcacggctgcccagcagagagtgc
ggcccggacctcacctgggtgcttctgcggctgggccacctgtacacccgccgggccctc
gcccggcaggccaagtgctgctacgagtgggccttcctggtcgctgtggagacggaccac
gtggagggccagctgcgtgccgtccagcggctatgtcatttctataggaccgtcatgccc
agagaggcccagtgcgtcgtctaccacgagttccagctctcgctggcccgcagggtggcc
gacaaggtgctggagggccagctcctggagaccatcagccagctctacctgtcgctgggc
actgagcgggcctacaagtccgcgctggactacactaaacgcagtctggggatcttcatc
gacctgcagaggaaggaaaaggaggcgcacgcctggctgcaggcagggaagatctactac
atcctccagcagaacgagctggtggacctctacatccaggtggcacagaatgcggccctg
tacacgggggaccccaacctggggctggagctgtttgaggcagccggggacatcttcttc
aatgggacctgggagcgggagaaagccgtgtccttctaccgggaccgggcgctgccgctg
gccgcgaccacagggaaccaggaggcggaactgcggctgtacaacaagctggcggccctg
ttggctgagctggagttgccccacgagggcctggagttcgcccacgcggccgtggcgctc
agcatcacccggggggaccggctgaacgagcgtgtggcctaccaccggctggccgtcctg
caccagcggctgggccatggcgagctggcggagcacttctacctcaaggcgctgtcactg
tgtggctcacccctgcagttcgatgaggaaaccctgtactacgtgaaggtgtatctggtg
cttggtgacatcctcttctacgacctgaaggaccccttcgacgcagctgggtactaccag
ctggcactggcagcggctgtggacctgggcaacaagaaggcccagatgaagatctacacg
cgcctggccatcatctaccacaactttctgctggaccgagagaagtccctcttcttctac
cagaaggccaggacctttgccactgagctcaatgtccgcagagtcaacctggccccagcg
cggtgttgggggcgggcaccctggctggtcgccggccccccaccctga
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