Lutra lutra (Eurasian river otter): 125100348
Help
Entry
125100348 CDS
T08100
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125100348
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
llv01007
]
125100348
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
llv03016
]
125100348
Enzymes [BR:
llv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
125100348
Amino acid related enzymes [BR:
llv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
125100348
Transfer RNA biogenesis [BR:
llv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125100348
Prokaryotic type
125100348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
HHH_3
tRNA-synt_2
tRNA-synt_2d
Virul_Fac
Sugarporin_N
Motif
Other DBs
NCBI-GeneID:
125100348
NCBI-ProteinID:
XP_047586458
LinkDB
All DBs
Position
5:complement(79301917..79318460)
Genome browser
AA seq
509 aa
AA seq
DB search
MAERAALEELVRLQGERVRGLKQQKASAEQIEEEVAKLLKLKAQLGPDEGKQKFVLKTPK
GTRDYSPRQMAVREKVFDVIVSCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
QFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVPDSKFRTICSSVDK
LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPELSQNKHALEGLG
DLKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQTPVRAGEEPLGVGSVAAG
GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKVRTTETQVLVASAQKKL
LEERLRLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
VASREEVDVRREDLVEEIKRRTSQPFCIC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgtgcagcactggaggagctagtgcgacttcagggagagcgcgtgcggggc
ctcaagcagcagaaggccagcgctgagcagatcgaggaggaggtggcaaaactactgaaa
ctcaaggcacagctgggccctgatgaagggaaacagaagtttgtgctcaaaacccccaag
ggtacaagagactacagtccccggcagatggctgttcgggagaaggtgtttgatgtaatt
gtcagctgcttcaagcgtcatggtgcagaagtaattgatacgcctgtgtttgaactaaag
gaaacactgactggaaagtatggagaagattctaagcttatctatgacctgaaggaccag
ggtggagagctgctgtcccttcgctatgacctcaccgttccttttgctcgatacttggca
atgaataaactgaccaacattaaacgctaccacatagccaaagtatatcggcgagataac
ccagccatgacccgtggccggtatcgggaattctatcagtgtgattttgacattgccgga
caattcgaccccatgatccctgatgcagagtgcctgaagatcatgtgtgagatcctgagt
tcccttcagataggcgacttcctggtcaaggtgaatgatcggcgcatcctcgatgggatg
tttgccatatgtggtgttcctgatagcaagttccgaaccatctgctcctcagtggacaag
ctggacaaggtgtcctgggaggaagtaaagaacgagatggtgggagagaagggcctcgca
cccgaggtggctgaccgtattggggactatgttcagcagcatggtggggtatcccttgtg
gaacaactgctccaggatcctgaactgtcccaaaacaaacatgccttggagggcctagga
gacctaaaactactgtttgaatacctgaccctgtttggcattgctgacaagatttccttt
gacctgagccttgctcgaggcctagactactacactggggtgatctatgaggcggtgctg
ctacagaccccagttcgggcaggggaagagcccttgggtgtgggcagtgtggctgccgga
ggacgctatgatgggctagtgggcatgttcgacccaaaaggacgcaaggtgccatgtgtg
gggctcagcattggggtagagcggatcttttccattgtggagcagaggctagaggctttg
gaggagaaggtacggaccacagagacacaggtgcttgtggcatctgcacagaagaagctg
ctggaggagagactgaggcttgtctcagagctctgggatgctgggatcaaggcagaactg
ctctacaagaagaacccaaagctgctgaaccagttgcaatactgtgaggaggcaggcatc
ccactggtggccatcattggtgagcaggagctcaaggacggggtcatcaagctccgctca
gtggccagcagggaagaggtggatgtccgaagagaagaccttgtggaagaaatcaaaagg
agaacaagccagcccttttgcatctgctga
DBGET
integrated database retrieval system
