Lutra lutra (Eurasian river otter): 125101806
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Entry
125101806 CDS
T08100
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
125101806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125101806
03021 Transcription machinery [BR:
llv03021
]
125101806
Transcription factors [BR:
llv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
125101806
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
125101806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
AcnX
HOCHOB
Motif
Other DBs
NCBI-GeneID:
125101806
NCBI-ProteinID:
XP_047588262
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All DBs
Position
6:complement(28908534..28913944)
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AA seq
360 aa
AA seq
DB search
MAGHLASDLAFSPPPGGGGDGPGGPEPGWVDPRTWLSFPGPPGGSGIGPGVGPGAEVWGI
PPCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGERGAGVESNSEGASPEPCAAPPG
AVKPDKEKQEQNPEESQDIKALQKDLEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFS
QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENR
VRGNLENMFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYSQREDFEA
AGSPFSGAPVSFPLAPGPHFGTPGYGSPHFTTLYSSVPFPEGEGFPSVSVTTLGSPMHSN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacacctagcttccgacttggccttctcgcccccgccgggcggtggaggcgat
gggccgggagggccggagcccggctgggttgaccctcggacctggctgagcttcccaggc
cctcccggcgggtcgggaatcgggccgggggtcgggccgggcgctgaggtgtgggggatt
cccccgtgccccccgccctatgagttctgcggagggatggcgtactgtggacctcaggtt
ggagtggggctggtgccccaaggcggcctggagacctcccagccggagggcgaacgggga
gccggggtggagagcaactccgagggagcctccccggagccctgcgctgcaccccctggg
gctgtgaagccggacaaggagaagcaggagcaaaaccccgaggagtcacaagacatcaaa
gctctgcagaaagacctggaacagtttgccaagctcctgaagcagaagaggatcaccctg
ggatatactcaggccgatgtggggctcaccctgggggttctctttgggaaggtgttcagc
caaaccaccatttgccgctttgaggctctgcagctcagtttcaagaacatgtgtaagctg
cggcccctgctgcagaagtgggtggaggaagctgacaacaacgaaaacctacaggagata
tgcaaagcagagaccctcgtgcaggcccgaaagagaaagcgaactagtatcgagaaccgc
gtgagaggcaacctggagaacatgttcctgcagtgcccgaagcccaccctgcagcagatc
agccacattgcccagcagctcggtcttgagaaggacgtggtccgagtgtggttctgcaat
cgtcggcagaagggcaaacggtcaagcagtgactattcgcaacgagaggattttgaggct
gctgggtcccctttctcaggggcaccagtatcctttcctctggcaccagggccccatttt
ggtaccccaggctatgggagccctcacttcactacgctgtactcctcagtccctttccct
gagggtgaaggctttccctctgtgtctgtcaccactctgggctctcccatgcattcaaac
tga
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