Lutra lutra (Eurasian river otter): 125101917
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Entry
125101917 CDS
T08100
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03030
DNA replication
llv03410
Base excision repair
llv03420
Nucleotide excision repair
llv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125101917
03410 Base excision repair
125101917
03420 Nucleotide excision repair
125101917
03430 Mismatch repair
125101917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llv03032
]
125101917
03036 Chromosome and associated proteins [BR:
llv03036
]
125101917
03400 DNA repair and recombination proteins [BR:
llv03400
]
125101917
DNA replication proteins [BR:
llv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125101917
DNA Replication Termination Factors
ELG1-RFC complex
125101917
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125101917
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125101917
Check point factors
HRAD17(Rad24)-RFC complex
125101917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_lid_RFC1
AAA_16
DUF815
AAA_22
AAA_11
AAA_30
Mg_chelatase
AAA_24
SLFN-g3_helicase
AAA_28
RuvB_N
AAA_19
AAA_5
ResIII
Viral_helicase1
AAA_7
Motif
Other DBs
NCBI-GeneID:
125101917
NCBI-ProteinID:
XP_047588457
LinkDB
All DBs
Position
1:complement(110516899..110532841)
Genome browser
AA seq
363 aa
AA seq
DB search
MQAFLKGTSVSTKPPLKDRGVAATVGSSGENKKTKPVPWVEKYRPKCVDEVAFQEEVVAV
LKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVRE
KVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICN
YVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIADKEHVKISNEGIAYLVKVSEGDLRKA
ITFLQSATRLTGGKEITEKVITDIAGVIPAETIDGIFAACQSGSFDKLEAVVKDLIDEGH
AATQLVNQFHDVVVENDNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCATVMQQLT
QNC
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttttctaaaagggacatctgttagtactaaaccaccgctgaaggatcgagga
gtagctgccacagttggaagcagtggagagaacaagaaaaccaaacctgtcccatgggtg
gaaaaatatcgcccaaaatgtgtggatgaagttgctttccaggaagaagtggttgcagtg
ctgaaaaagtctttagaaggagctgatctccctaatctcttgttttatgggccacctgga
actggaaaaacatccactattttggcagcagctagagagctttttgggcctgaacttttt
cgattaagagttcttgaattaaatgcatctgatgaacgtggaatacaagtagttagagaa
aaggtgaagaattttgctcaattaactgtgtcaggaagtcgttcagatgggaagccatgt
cctccttttaagattgtgattctggatgaggcagattctatgacctcagctgctcaggca
gctttacgacgtaccatggagaaggagtctaaaaccacgagattctgtctcatctgtaac
tatgtcagtcgaataattgaacctctgacgtctagatgttctaaattccgattcaaacca
ctgtcagataaaattcagcagcagcgattactagacattgctgataaagaacatgtcaaa
attagcaatgagggaatagcttatcttgttaaagtgtcagaaggagatttaagaaaagcc
attacatttcttcaaagcgctacccgattaacaggtggaaaggagatcacagagaaggtg
attacagacattgctggggtaataccagcagagacaattgatggaatatttgctgcgtgt
cagagtggctcatttgacaaactagaagctgtggtaaaagacttaattgatgagggtcat
gcagcaactcagcttgtaaatcaatttcacgatgtggtggtagaaaatgataacctttct
gataaacagaaatccattatcacagaaaaacttgccgaagtagacaaatgcttagcagat
ggtgctgatgaacatctacaattgatcagcctctgtgcgacagtgatgcagcagttaact
cagaattgctga
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integrated database retrieval system