Liquorilactobacillus mali: LM596_01720
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Entry
LM596_01720 CDS
T06815
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lmal
Liquorilactobacillus mali
Pathway
lmal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LM596_01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmal03021
]
LM596_01720
03400 DNA repair and recombination proteins [BR:
lmal03400
]
LM596_01720
Enzymes [BR:
lmal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LM596_01720
Transcription machinery [BR:
lmal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LM596_01720
DNA repair and recombination proteins [BR:
lmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LM596_01720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QFQ73928
LinkDB
All DBs
Position
389618..393214
Genome browser
AA seq
1198 aa
AA seq
DB search
MNNLAGHIVKYGKHRTRRSYARIKEVLDLPNLIEIQSDSYKWFLDEGLREMFEDIMPIED
FAGNLSLEFVDYQLLEPKYTVEEARQHDANYSAPLHVTLNLINHETGEIKAQDVFFGDFP
LMTEQGTFIINGAERVIVSQLVRSPGVYYNSELDKNGRENYGTTVIPNRGAWLEYETDAK
NIAYVRIDRTRKIPLTELVRALGYSSDDEIIQILGSSDSLMLTLEKDVHKNADDSRVVES
LKDIYERLRPGEPKTADSSRSLLTARFFDPKRYDLAPVGRYKINKKLDLKTRLLNLTLAE
TLADPETGEIIVNKDTVLDKHVMEKLTPYLEKKDFKTVVFHPSDEGVVTDPMTLQIIKVY
SPNDPEKVVNMIGNGNIDLKFKHILPADIIASMNYFFNLQEGIGFVDDIDHLGNRRIRSV
GELLQNQFRIGLSRMERVVRERMSIQDTSTVTPQQLINIRPVVASIKEFFGSSQLSQFMD
QTNPLGELTHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINSLS
SYARVNRYGFIETPYRRVSWTTHMVTDKIDYLTADEEDNYVIAQANSPLNEDGSFVDNVV
MARSKSENIETTVDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLLD
PHAPLVGTGIEYKTAHDSGVALISKSEGTVEYVDAREIRVRRADGSLDKYKLMKFRRSNG
GKNYNQRPIVRVGDHVDYDEVLADGPSMEGGELALGQNPLIAFMTWDGYNFEDAIAINER
LVKEDVYTSIHIEEHESEARDTKLGPEEMTREIPNVGEDTLRDLDEFGIVRIGAEVHDGD
ILVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVQDVKIFTREAGDE
LSPGVNMMVRVYIAQKRKIQVGDKMAGRHGNKGTVSIVIPEEDMPFMPDGTPIDIMLSPM
GVPSRMNIGQVLDLHLGMAARKLGIHVASPVFDGARDSDIWDALKEAGMSTDGKTVLYDG
RTGDAFDNRIAVGVMYYMKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGL
DMKVLDVAKNEIELRDMDDEDDEVVNVDALSKVAKEQAEKKEQKEEVNVEKTESRTEN
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacttggcaggacatatagtaaaatacggtaaacaccgtacacgtagaagttat
gctcgaatcaaggaagtacttgatttacctaacttgattgagattcaaagcgactcctac
aagtggtttttggatgaaggtcttcgcgaaatgtttgaagatattatgccaattgaggat
tttgcgggtaacttatcgcttgaatttgtcgactatcagttgcttgaacctaagtacact
gtagaggaagcaagacaacatgatgcaaattattcagctccacttcatgtaacacttaac
ttgattaatcatgaaaccggtgagatcaaggcacaagatgttttctttggtgattttccg
ttaatgactgaacagggtacgtttatcatcaatggtgccgaacgtgtaattgtttcccaa
ttagtacgttcaccaggagtgtattataactctgaattggacaaaaatgggcgtgaaaat
tatggtacaaccgtaatccctaatcgaggtgcatggttagagtatgagacggatgcaaaa
aatattgcatatgttcgtattgatcgtacacgtaagattcctttgactgaattagttcgt
gctcttgggtatagttcagacgatgagattatccaaattcttggtagctctgatagcttg
atgctgactcttgaaaaagatgttcacaaaaatgcagatgattcacgtgttgttgaatca
ttgaaggatatttatgaaagactacgtccaggagagcccaaaactgctgacagttcacgt
agcttgctaactgcacgcttttttgatccaaaacgttatgatttagctcctgttggtcga
tacaagattaataaaaaacttgatttaaagactagattgcttaatttgacacttgctgaa
acgttagcagaccctgaaacaggggagattatcgttaacaaggatactgtgcttgataaa
cacgttatggagaaattgacaccatatcttgaaaagaaagatttcaagaccgttgttttc
catccgtcagatgaaggggttgttactgaccctatgactcttcaaatcattaaagtttac
tctccaaatgatcccgaaaaagttgtaaacatgattggtaatggaaacatcgatttgaaa
tttaaacatattttgcccgctgatattattgcttcaatgaactatttctttaatttacaa
gaaggaattgggtttgttgatgatattgatcatttgggcaaccgtcgtatccgctcagtt
ggtgaattattacaaaaccaatttagaattggtctttcacgtatggaacgtgttgttcgt
gagagaatgtcaattcaagatacatcaactgtgacaccacaacaattaattaatattcgt
cctgtagttgcttccatcaaggaattctttggtagttcgcagctttcacaatttatggac
cagactaatccgcttggtgaattaacacataagcgtcgtttatctgccttaggacctggt
ggtttgactcgtgatcgtgctgggtatgaagttcgagatgttcattatactcattatggt
cggatgtgcccaattgaaacacctgaaggacccaatattggtttgattaacagtctttct
tcttatgctcgagtaaatcgttatggctttattgaaacaccatatcgtcgtgtttcatgg
acaacacatatggttacggataagattgattatttgactgctgatgaagaagataattat
gttattgcacaggctaactcaccattaaatgaagatggttcatttgttgataatgttgtt
atggctcgcagcaagagtgaaaatatcgaaacaactgttgataaagtcgactatatggat
gtttcacctaaacaagttgttgcggttgcaacggcatgtattccattcttggaaaatgat
gattctaaccgtgcgttgatgggtgccaacatgcagcgtcaagctgtgcctttgcttgat
ccacatgctccacttgttggaacaggtatcgaatacaagactgcacatgactcaggggta
gctctaattagtaagagtgaaggtaccgttgaatatgtagatgcacgtgaaatccgtgtt
cgtcgtgccgatggttcgcttgataaatacaagttaatgaaattccgccgttctaatggt
ggtaaaaactataaccaaagaccgattgttcgcgtgggagatcatgttgattatgatgag
gttttggctgatggtccatcaatggaaggtggagagttagcattaggacaaaatccattg
attgccttcatgacttgggatggctataactttgaagatgcgattgctattaatgaacgc
ttggttaaagaagatgtatacacatcaatccatattgaagagcatgaatcagaagctcgt
gatacaaagctagggcctgaagaaatgactcgtgagattcctaacgttggtgaagataca
ttacgtgaccttgatgaatttgggattgtgcgtattggtgctgaggttcatgatggtgat
attttagttggtaaggttacccctaaaggtgtgacagaattatctgctgaagaacgtcta
ttgcatgcaatctttggcgaaaaagctcgtgaagttcgtgatacttcattacgtgtacct
catggtggtggcggaatcgtgcaagatgtaaaaatctttacacgtgaagcaggtgatgaa
ttgtctcctggtgttaacatgatggttcgtgtttatattgcacaaaaacgtaagattcaa
gttggtgacaagatggctggacgtcatggtaataaagggacagtttcaatcgttattcct
gaagaggatatgccatttatgcctgatggaactccaattgatattatgcttagcccaatg
ggtgtgccatctcgtatgaatattggacaggttctcgatcttcacttgggtatggcggct
cgcaaacttggtatacatgttgcttcaccagtttttgatggtgctcgtgatagtgatatc
tgggatgctttaaaagaagcaggcatgtcaactgatgggaaaacagttctttatgatggt
cgtacaggtgatgcatttgataaccgaattgctgtcggtgttatgtactacatgaaactt
gcacatatggttgatgataagattcatgctcgttctattggaccatactcactcgttaca
caacagcctcttggtggtaaagcacagtttggtggacagcgctttggtgaaatggaagta
tgggcacttgaagcatatggtgctgcatatactttacaggaaattttgacgtataagtct
gatgatgttgttggacgtgttaagacttatgaggcaattgtcaaaggtgaaccaattcca
aaaccaggcgttcctgaatcattccgtgtacttgtaaaagagttgcaatcattaggcctt
gatatgaaggtcttggatgtagctaagaatgagattgaattacgtgatatggatgacgaa
gacgatgaagtcgttaatgttgatgctttaagtaaggtagcgaaagaacaagctgaaaag
aaagaacaaaaagaggaagtcaatgtggaaaagactgaatctagaactgagaactag
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integrated database retrieval system
