Larus michahellis (yellow-legged gull): 141732189
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Entry
141732189 CDS
T11135
Symbol
UPF3A
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03013
Nucleocytoplasmic transport
lmic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141732189 (UPF3A)
03015 mRNA surveillance pathway
141732189 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmic03019
]
141732189 (UPF3A)
Messenger RNA biogenesis [BR:
lmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
141732189 (UPF3A)
mRNA cycle factors
P-body specific factors
141732189 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
141732189
NCBI-ProteinID:
XP_074416855
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All DBs
Position
1:complement(155894955..155921274)
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AA seq
532 aa
AA seq
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MGRGTPARPPPPTLARFRPISGQFSRGFRLAVGSGGGSMRSEREAGSGPMRGGGRDKWST
DIPLRRESPRRDPDPPANPPPPPSPPSPLPPPLHPAPVKQREEKKTALSKVVIRRLPPCL
TKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLFRDRFDGYVFIDN
KGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCADEEKICANPEILL
GEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRLREEEKRKRRE
EERRKRKELEKQKKISEKEIRIKLLKKPEKGDELASEKHKEKGEEPDIEENKWDKSPGSG
SMKSKSLEGSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDGRKHRAHYEFDKF
VRRNEEELKWGKGYNPDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASKKERIRNKDRPAM
QLYQPGARIRTHTGSTSKTYDCGGKSFEDALDKKYEADNSAGGGSEKSEEAE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggggacccccgctcgccccccgcccccaactctcgcgagattccgcccgatc
agcggccagttctcgcgaggtttccggctggctgtgggcagcggcggcggctccatgcgg
tcggagcgggaggccgggtcggggccgatgcggggcggtggccgcgacaagtggtccacg
gacatcccgctgcggcgggagtcgccgcgccgcgacccggaccctccggcaaacccgccg
ccgccgccttctccaccctccccgctgccgccgccgcttcacccggcgccggttaaacag
cgcgaggagaaaaaaacggccctgagcaaagtagttattcgacggcttcctccttgtcta
actaaggagcaactggaggaacagctacatcctctacctgcgcatgattattttgagttt
tgcactgctgatcccagcctttatcctcatctctactcaagagcatacattaactttaga
aatcctgaggacatccttctttttagagatcgctttgatggctatgtcttcattgataat
aaaggtttggagtatcctgcagtggttgaatttgctccattccagaagatttcaaaaaag
aagctgaagaagaaagatgccaaagccggtagcattgaagatgatccagaatatagaaaa
tttttagaaagttattgtgctgatgaagagaaaatctgtgccaatcctgagattcttttg
ggagagattgaggccaaaacaagggaactcattgctagaagaacaacaccccttttggaa
tatattaaaaatagaaaattagaaaagcagagaatacgagaagagaaaagggaagaacga
aggcgaagagaattggagaagaaacgtctacgggaggaagagaaaaggaagcgcagagaa
gaagaaagacgtaaaagaaaagaattggagaagcaaaagaagatttctgaaaaagaaata
aggatcaagcttcttaagaagcctgaaaaaggagatgagctggccagtgaaaagcacaaa
gaaaaaggtgaagaacctgacattgaagaaaacaaatgggataaatcacctggatctgga
agtatgaaatccaaatcactggagggttcactaaaagaacttaaggaaaagtcacaaaat
gatagtgacaaagagcaaagagatttggagagaagatttcgagaaaaagaacctgaaaga
caaaggtatcgattggatgatggcagaaagcatagagctcactatgagtttgacaagttt
gtgagaaggaatgaagaagagctgaaatgggggaaaggatacaacccagacagaggaaag
aaagggaactacaactacagcttcactgtggaggcagtagacaaactgggtaaagaggac
aagtgtgatgacatggcatccaaaaaggagcgcataagaaataaggatcgcccggccatg
cagttataccagccaggagctcgcattcgaacacatacgggatctacaagtaaaacctac
gactgcggtggcaaatcctttgaagatgctcttgataaaaagtatgaggcagataattca
gctggaggtggttctgagaagagcgaagaagcagaataa
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