Larus michahellis (yellow-legged gull): 141742590
Help
Entry
141742590 CDS
T11135
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic02010
ABC transporters
lmic04146
Peroxisome
lmic04977
Vitamin digestion and absorption
lmic04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141742590 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141742590 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
141742590 (ABCD4)
04980 Cobalamin transport and metabolism
141742590 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmic04131
]
141742590 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmic02000
]
141742590 (ABCD4)
Enzymes [BR:
lmic01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
141742590 (ABCD4)
Membrane trafficking [BR:
lmic04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
141742590 (ABCD4)
Transporters [BR:
lmic02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
141742590 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
SbmA_BacA
AAA_7
AAA_22
nSTAND1
DUF6079_1st
AAA_23
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
141742590
NCBI-ProteinID:
XP_074441337
LinkDB
All DBs
Position
4:complement(65170389..65186365)
Genome browser
AA seq
637 aa
AA seq
DB search
MAGGSAGARGGGAGGRPGPRLDGLFLRRFLRLQAVLFPGWPSPAALMFLTLLCVALLEQL
VIYQVGVIPSQYYEVLGNKDFSGFKTLTAVALTLIVVNSTLKSFDQFICNMMYVNWRKSL
TEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKIVISPFTLAYYT
YQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEP
AAFYRAGRVEHMRTNRRLQSLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFS
GVYGDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVSDVAGYTHRIGELQETLLSLG
RKKNDNYSEAKASWDLDSSCSGENPVPRDTAFLLERVTLSVPSSGKLLIKDLSLRISQGN
SVMIVGNTGTGKTSLLRVLGGLWESTRGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVI
YPLKEIYPVSGSADDERIVRFLELAGLTDLLERAGGLDKQVDWNWYDILSPGEMQRLSFA
RLFYLQPKYAVLDEATSALTEEVEHELYRVCLQLGMTLISVGHRASLEKFHSWILKLHGE
GRWELTRCEKMKPGKDAEKQALVCPATEPACAWESSE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcagcgccggtgcgaggggcggtggggccggcggccggcctgggccgcgg
ctggacgggctgttcctgcggcgcttcctgcggctgcaggccgtcctcttccccggctgg
ccctccccggccgccctgatgttcctgacgctgctctgcgtcgccttgctggagcagctg
gttatctaccaggtcggtgtcatccccagccagtactacgaggtcctggggaacaaggac
ttctccgggttcaaaacactgactgccgtggccctgactctcatcgtagtgaattccacg
ctaaaaagtttcgaccagtttatctgcaacatgatgtacgtgaactggagaaaatccctc
accgaatacctccacagctgctacttccagggccaggtctactacagcctgcacgtgctg
cgtgaggacatcgataacccggaccagcgtatcagccaggatgtggagaggttctgcagg
cagctcagctccatggccagcaagattgtcatctcgcccttcacactggcctactacaca
taccagtgcttccacagcacaggctggctaggcccggtgagcatctttgggtatttcatc
attgggacaattgtcaacaaggtattgatgagcccaattgtgtctaaacttgtgcagcag
gaaaaactggaaggggatttcaggttcaagcacatgcagattcgtgtcaacgcagaacca
gctgctttctacagggctgggcgagtggagcacatgcgcacgaaccggaggctgcagagc
ctgctgcagacccagagggagctgataggcaaggagctgtggctctacattgggatcaac
acctttgactacctgggcagcatcctgagctacgtggtcattgccattcccatattttct
ggggtctacggtgacttgagtccaacagagctcagcgccctcgttagcaagaatgccttt
gtttccatctacctcattggctgcttcagccaactcatagatctctccagcactgtgagc
gatgtagctggctacacacacaggattggtgaattgcaggagaccttgctgagccttggc
agaaaaaaaaatgataactactcagaagccaaagccagctgggatttggacagcagctgt
tctggggagaacccagtgccaagggacacagctttccttctggagcgggtgacactctca
gtgccatcctctggcaagctactcatcaaggacttgagcctcaggatctcacaaggaaac
agcgtgatgattgtggggaacactggaacagggaagacatctctcctgagggtccttggg
ggactctgggaaagcacacgggggagcatcaagatgctgacctgctttggcccccgggga
gtggtgttcctgccgcagcggcccttcttcaccgatggaagcctgcgtgagcaggtgatc
tatccgctgaaggagatctatccagtttcagggtctgcagatgatgagagaattgtgcga
ttcctggagctggccgggctgactgatttgctggaaagagctggaggactggacaagcag
gtggactggaactggtatgacatcctgtctccaggggagatgcagaggctgtcatttgca
cggctcttctacctccagccaaaatatgcagtgctagatgaagccacaagtgccttgaca
gaagaggtggagcatgaactgtaccgtgtgtgccttcagctgggcatgacactgatcagc
gtgggacacagggccagcctggaaaagttccacagctggattttgaaacttcatggagag
ggaagatgggagctcactcgatgcgagaagatgaagccagggaaggatgctgaaaaacaa
gcccttgtctgtccagccacagaacctgcatgcgcatgggagagctctgaatag
DBGET
integrated database retrieval system
