Lautropia mirabilis: NCTC12852_01772
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Entry
NCTC12852_01772 CDS
T05799
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lmir
Lautropia mirabilis
Pathway
lmir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12852_01772 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmir03400
]
NCTC12852_01772 (uvrB)
DNA repair and recombination proteins [BR:
lmir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12852_01772 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC12852_01772 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
UB2H
Kinesin
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
VEH02440
LinkDB
All DBs
Position
1:2181514..2183703
Genome browser
AA seq
729 aa
AA seq
DB search
MLSETGQAQGRAGKRKAAEKAPASSAAPAAPGPRVVTYPGSPYRLHQPFPPAGDQPGAID
ALVEGVEDGLSFQTLLGVTGSGKTYTMANVIARLGRPALVLAPNKTLAAQLYAEMRDFFP
ENAVEYFVSYYDYYQPEAYVPQRDLFIEKDSAINEHIEQLRLSATKSLLERRDTVIVGSV
SCIYGIGNPADYFEMRLVLRKGDRLAQRDLLKQLVAMQYKRNDTDFARGTFRVRGDTIDV
FPSENAELALRVEMFDDEVEMLQLFDPLTGRIRQQIPRFVVYAASHYVTPRATIVRALDT
IKAELKDRLAFFHAEGKLVEAQRLEQRTLFDLEMLQELGFCKGIENYSRHLSGARPGEPP
PTLIDYLPPDALMFIDESHVTIGQLGGMYRGDRARKDTLVQYGFRLPSALDNRPLTFEEF
ESKVRQCIFVSATPSDYEATHAGQVVEQVVRPTGLVDPEVEVRPATTQVDDVLSEITARV
ARGHRVLVTTLTKRMAEDLTDFLADHQVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGI
NLLREGLDIPEVSLVAILDGDKEGFLRSERSLIQTIGRAARNLEGKAILYADQITRSMQR
AIDETARRRQKQLDFNAEHGIVPRGVVKQVRELIDGVYDLSGTESRPAAPGAAPGHGLGG
VDDALLERTAEKLQGIDTRNEAQVSREIRRLEKQMATYARNLDFEKAAQVRDELAALKQL
LFGSGGQPS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcagagaccggtcaagcacagggcagggcaggcaagcgcaaggcggctgaaaag
gcgcctgcgtcatcggccgcacccgctgcgcccggtccgcgggtcgtcacctatcctggc
agtccctaccggttgcatcagccctttccgccggcaggcgatcagcccggcgccatcgac
gcgctggtcgagggcgtggaggacggcctttcgttccagacgctgctgggcgtgacgggc
tcgggcaagacctacaccatggccaacgtcatcgcccggctggggcggccggcgctggtg
ctggcacccaacaagaccctggcggcgcagctctacgccgagatgcgcgacttctttccg
gaaaatgccgtcgagtacttcgtctcgtactacgactactatcagccggaagcctatgtg
ccccagcgtgatctcttcatcgagaaggattccgccatcaacgagcacatcgagcagttg
cgcctgtcggccaccaagtcgctgctggagcggcgtgacaccgtcatcgtcggcagcgtc
tcgtgcatctacggtatcggcaacccggccgactatttcgagatgcgactggtgctgcgc
aagggtgatcgtctcgcacagcgcgacctgctcaagcagctggtggccatgcagtacaag
cgcaacgacaccgacttcgcgcgcggcaccttccgtgtgcgcggcgacaccatcgacgtg
ttcccgtccgagaacgccgagctggcgctgcgcgtcgagatgttcgacgacgaggtggag
atgctgcagctcttcgacccgctcaccgggcgcatccgccagcagatcccgcgcttcgtc
gtctatgcggcctcgcactacgtcacgccgcgcgccaccatcgtgcgcgcactcgacacc
atcaaggccgagctgaaggaccggctggcgttcttccacgctgagggcaagctcgtcgag
gcgcagcgcctggagcagcgcacgctcttcgatctggagatgctgcaggagctgggcttc
tgcaagggcatcgagaactactcgcggcacctgtcgggtgcacggcctggcgagccgccg
cccacgctcatcgattacctgccgcccgatgcgctgatgttcatcgacgagagccacgtc
accatcggccagctgggcggcatgtatcgtggcgaccgcgcccgcaaggacacgctggtg
cagtacggcttccggctgccttcggcgctggacaaccggccgctcaccttcgaggaattc
gagtcgaaggtgcgccagtgcatcttcgtctcggccacgccgtccgactatgaggccacc
cacgccggccaggtggtcgagcaggtggtgcgtcccactggcctggtcgaccccgaggtg
gaggtacggccggccaccacccaggtcgacgacgtgctctccgagatcacggcccgggtg
gcccgggggcatcgggtgctggtcaccacgctcaccaagcgcatggccgaggatctcacc
gacttcctggccgatcaccaggtgcgggtgcgctacctgcattccgacatcgacacggtc
gagcgcgtcgagatcatccgtgacctgcgcctgggcgtcttcgacgtgctggtgggcatc
aacctgctgcgcgagggcctggacattcccgaggtgtcgctggtggccatcctggatggt
gacaaggagggcttcctgcgctccgagcgcagcctgatccagaccatcgggcgtgcggcc
cgcaacctggaaggcaaggccatcctgtacgccgaccagatcacccgctccatgcagcgt
gccatcgacgagacggcgcgccgccgccagaagcagctcgacttcaatgccgagcacggc
atcgtgccgcgtggcgtggtcaagcaggtgcgcgagctcatcgatggtgtttacgacctc
tccggtaccgagtcgcggccggctgccccgggcgccgcgcccggccatggcctcggtggc
gtggacgatgccctgctcgagcgcacggccgagaagctgcagggcatcgacacccgcaac
gaggcccaggtctcgcgcgagatccgccggctggaaaagcagatggccacctatgcccgc
aacctcgatttcgagaaggccgcccaggtacgcgacgagctggcggccctcaagcaactg
ctgttcggctccggaggccaaccctcatga
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