KEGG   Lautropia mirabilis: NCTC12852_01772
Entry
NCTC12852_01772   CDS       T05799                                 
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
lmir  Lautropia mirabilis
Pathway
lmir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lmir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCTC12852_01772 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmir03400]
    NCTC12852_01772 (uvrB)
DNA repair and recombination proteins [BR:lmir03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCTC12852_01772 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NCTC12852_01772 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C UVR ResIII DEAD AAA_30 UB2H Kinesin AAA_22 DUF87
Other DBs
NCBI-ProteinID: VEH02440
LinkDB
Position
1:2181514..2183703
AA seq 729 aa
MLSETGQAQGRAGKRKAAEKAPASSAAPAAPGPRVVTYPGSPYRLHQPFPPAGDQPGAID
ALVEGVEDGLSFQTLLGVTGSGKTYTMANVIARLGRPALVLAPNKTLAAQLYAEMRDFFP
ENAVEYFVSYYDYYQPEAYVPQRDLFIEKDSAINEHIEQLRLSATKSLLERRDTVIVGSV
SCIYGIGNPADYFEMRLVLRKGDRLAQRDLLKQLVAMQYKRNDTDFARGTFRVRGDTIDV
FPSENAELALRVEMFDDEVEMLQLFDPLTGRIRQQIPRFVVYAASHYVTPRATIVRALDT
IKAELKDRLAFFHAEGKLVEAQRLEQRTLFDLEMLQELGFCKGIENYSRHLSGARPGEPP
PTLIDYLPPDALMFIDESHVTIGQLGGMYRGDRARKDTLVQYGFRLPSALDNRPLTFEEF
ESKVRQCIFVSATPSDYEATHAGQVVEQVVRPTGLVDPEVEVRPATTQVDDVLSEITARV
ARGHRVLVTTLTKRMAEDLTDFLADHQVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGI
NLLREGLDIPEVSLVAILDGDKEGFLRSERSLIQTIGRAARNLEGKAILYADQITRSMQR
AIDETARRRQKQLDFNAEHGIVPRGVVKQVRELIDGVYDLSGTESRPAAPGAAPGHGLGG
VDDALLERTAEKLQGIDTRNEAQVSREIRRLEKQMATYARNLDFEKAAQVRDELAALKQL
LFGSGGQPS
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgttgtcagagaccggtcaagcacagggcagggcaggcaagcgcaaggcggctgaaaag
gcgcctgcgtcatcggccgcacccgctgcgcccggtccgcgggtcgtcacctatcctggc
agtccctaccggttgcatcagccctttccgccggcaggcgatcagcccggcgccatcgac
gcgctggtcgagggcgtggaggacggcctttcgttccagacgctgctgggcgtgacgggc
tcgggcaagacctacaccatggccaacgtcatcgcccggctggggcggccggcgctggtg
ctggcacccaacaagaccctggcggcgcagctctacgccgagatgcgcgacttctttccg
gaaaatgccgtcgagtacttcgtctcgtactacgactactatcagccggaagcctatgtg
ccccagcgtgatctcttcatcgagaaggattccgccatcaacgagcacatcgagcagttg
cgcctgtcggccaccaagtcgctgctggagcggcgtgacaccgtcatcgtcggcagcgtc
tcgtgcatctacggtatcggcaacccggccgactatttcgagatgcgactggtgctgcgc
aagggtgatcgtctcgcacagcgcgacctgctcaagcagctggtggccatgcagtacaag
cgcaacgacaccgacttcgcgcgcggcaccttccgtgtgcgcggcgacaccatcgacgtg
ttcccgtccgagaacgccgagctggcgctgcgcgtcgagatgttcgacgacgaggtggag
atgctgcagctcttcgacccgctcaccgggcgcatccgccagcagatcccgcgcttcgtc
gtctatgcggcctcgcactacgtcacgccgcgcgccaccatcgtgcgcgcactcgacacc
atcaaggccgagctgaaggaccggctggcgttcttccacgctgagggcaagctcgtcgag
gcgcagcgcctggagcagcgcacgctcttcgatctggagatgctgcaggagctgggcttc
tgcaagggcatcgagaactactcgcggcacctgtcgggtgcacggcctggcgagccgccg
cccacgctcatcgattacctgccgcccgatgcgctgatgttcatcgacgagagccacgtc
accatcggccagctgggcggcatgtatcgtggcgaccgcgcccgcaaggacacgctggtg
cagtacggcttccggctgccttcggcgctggacaaccggccgctcaccttcgaggaattc
gagtcgaaggtgcgccagtgcatcttcgtctcggccacgccgtccgactatgaggccacc
cacgccggccaggtggtcgagcaggtggtgcgtcccactggcctggtcgaccccgaggtg
gaggtacggccggccaccacccaggtcgacgacgtgctctccgagatcacggcccgggtg
gcccgggggcatcgggtgctggtcaccacgctcaccaagcgcatggccgaggatctcacc
gacttcctggccgatcaccaggtgcgggtgcgctacctgcattccgacatcgacacggtc
gagcgcgtcgagatcatccgtgacctgcgcctgggcgtcttcgacgtgctggtgggcatc
aacctgctgcgcgagggcctggacattcccgaggtgtcgctggtggccatcctggatggt
gacaaggagggcttcctgcgctccgagcgcagcctgatccagaccatcgggcgtgcggcc
cgcaacctggaaggcaaggccatcctgtacgccgaccagatcacccgctccatgcagcgt
gccatcgacgagacggcgcgccgccgccagaagcagctcgacttcaatgccgagcacggc
atcgtgccgcgtggcgtggtcaagcaggtgcgcgagctcatcgatggtgtttacgacctc
tccggtaccgagtcgcggccggctgccccgggcgccgcgcccggccatggcctcggtggc
gtggacgatgccctgctcgagcgcacggccgagaagctgcagggcatcgacacccgcaac
gaggcccaggtctcgcgcgagatccgccggctggaaaagcagatggccacctatgcccgc
aacctcgatttcgagaaggccgcccaggtacgcgacgagctggcggccctcaagcaactg
ctgttcggctccggaggccaaccctcatga

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