KEGG   Labrus mixtus (cuckoo wrasse): 132953898
Entry
132953898         CDS       T10666                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix03266  Virion - Herpesvirus
lmix04081  Hormone signaling
lmix04145  Phagosome
lmix04148  Efferocytosis
lmix04510  Focal adhesion
lmix04512  ECM-receptor interaction
lmix04517  IgSF CAM signaling
lmix04810  Regulation of actin cytoskeleton
lmix04820  Cytoskeleton in muscle cells
lmix05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    132953898
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    132953898
   04512 ECM-receptor interaction
    132953898
   04517 IgSF CAM signaling
    132953898
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    132953898
   04148 Efferocytosis
    132953898
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    132953898
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132953898
   04810 Regulation of actin cytoskeleton
    132953898
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    132953898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lmix04131]
    132953898
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmix04147]
    132953898
   04515 Cell adhesion molecules [BR:lmix04515]
    132953898
   04090 CD molecules [BR:lmix04090]
    132953898
Membrane trafficking [BR:lmix04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    132953898
Exosome [BR:lmix04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132953898
Cell adhesion molecules [BR:lmix04515]
 Integrins
  Integrin beta subunits
   132953898
CD molecules [BR:lmix04090]
 Proteins
  132953898
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin I-EGF_1 PSI_integrin EGF_2 EGF_Teneurin EGF_TEN vWA_SIBA-E
Other DBs
NCBI-GeneID: 132953898
NCBI-ProteinID: XP_060882237
LinkDB
Position
20:14801487..14813262
AA seq 781 aa
MGTFFLVFLFLSAATNVFGASICTSRGVTTCQQCLAVDPSCAWCSQEEFGKRGSGVSRCD
LKQDLLDGGCTEDALEFPSSTLTIHKDDPLSDKSSGTAGVTQIKPQKVHMTLRPGDAKQF
TVSVKQVEDYPVDLYYLMDLSYSMKDDLDRLRTLGNDLAAVMGRTTSNLRMGFGAFVDKT
VSPYMYTYPPEAVANPCDEISTTCQAQFGFKHVLSLTESVARFNDEVDKQQVSRNRDSPE
GGFDAIMQAVVCKDKVGWRPDASHLLVYTTDAKTHLALDGRIAGIVQPNDGQCHLDIDNV
YNKSNVLDYPSLGLMTEKMSENNINLIFAVTSYVLDLYKSYSKLIPGTTVGMLSEDSGNV
IGLIEQAYKNIRSKVELELVDVPEELTLSFNASCKKEEVIPGLKSCSGLVIGDTVSFSVE
AKLRDCPKEKSRTFTIKPRGFKDSLEVTVDFACGCDCEAMAEGNSSLCSNGNGTYECGVC
QCHQGRLGPRCECSVEDYRPSDDANCIPDPDSLICNGKGNCLCGQCSCHSNDFGQVWGKY
CECDDFSCLRFKGALCSNHGKCSCGFCLCDSGWKGENCNCSTRIDTCWSSNGLQCSGRGY
CECGVCQCTQPGAYGETCEKCPTCPDSCDIKKPCVECLHFKRGPYIKDNSCSKICKDEIH
VVEELGKKENAVNCSYKDENDCVEHFQYYEDENGKSNLNVIKEPECPEGADILVVLLAVA
GAVLLLGLVGLLIWKLVVTISDRKEFARFEEERAKAKWDTANNPLYKGATSTFTNVAYRG
N
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgggaactttctttctggttttcctctttttgtcagcggcaacaaacgttttcggtgcc
agcatctgcacatcacgaggagtcaccacttgtcaacagtgcttggccgttgatcctagc
tgtgcatggtgctctcaggaggagtttgggaaaaggggatccggtgtgtcccgctgtgac
ctgaagcaggatctactggatggaggatgcacagaggatgctctggagtttccgtccagc
acactgactattcataaggacgacccgctcagcgacaagtcctcagggactgctggtgtc
actcagatcaagcctcagaaagtccacatgacactaagaccaggtgatgccaagcagttc
accgtgtcagtgaaacaggtggaagattacccggtagatctctactatctgatggacctt
tcatattcaatgaaggatgacttggatcggcttcgcacgttgggcaacgaccttgccgca
gttatgggccgcaccacaagcaacctacgcatggggtttggagcatttgtggacaagacc
gtctctccttacatgtacacatatcctccagaggcagtggcaaacccttgcgatgaaatc
agcactacatgccaggctcaatttgggttcaagcatgtgttgtcactgacagagagtgta
gctcgcttcaatgacgaggtggataaacagcaggtgtctagaaacagagattctccagag
ggtggatttgatgctatcatgcaggcggtggtgtgcaaggacaaggttggctggcgtcct
gatgcctcacatcttctggtatacaccactgatgccaaaactcaccttgctctggatgga
cgtatagctggaattgttcagcccaatgatggacaatgtcaccttgacattgacaatgtt
tacaacaagtccaatgtgctggactatccttccttggggctcatgacggagaaaatgtct
gaaaacaacatcaatttaatttttgctgtgaccagctatgtacttgatctttacaagagt
tacagtaaacttattcctggaacaactgtgggaatgctctccgaagactcagggaatgta
attgggctcattgagcaggcttacaagaatatccgctcaaaagtggagctggagctggta
gatgtcccagaagagttaactctctccttcaacgcctcttgcaagaaagaagaggtcatc
cctggactcaagtcctgctctggcctcgttattggtgacacagtgtcattcagtgtggag
gccaagttgcgagactgccccaaagagaagagtcgcacatttactatcaaacctcgaggc
tttaaggattccttggaggtcacagtagattttgcgtgtggctgcgactgtgaagcaatg
gccgaaggcaacagctcgctctgtagcaatggcaacgggacgtacgagtgcggcgtgtgt
cagtgtcaccaaggtcgtctcggcccacgatgtgaatgttcagtggaagactacagacca
tctgacgatgccaactgcatcccagatccagacagtctgatctgcaatgggaagggcaac
tgtttgtgcggccagtgctcctgccattcaaatgactttggtcaggtgtggggcaaatac
tgtgaatgtgacgacttcagctgcctgcgcttcaaaggggcactgtgttccaatcatggg
aagtgtagttgtgggttctgcctgtgcgattctggctggaaaggagagaactgtaactgc
agcacacgcattgacacctgctggtccagcaatggcctgcagtgcagcggccgggggtac
tgcgagtgcggggtctgtcagtgcacccagcctggtgcctacggagaaacctgtgagaaa
tgccccacctgtcccgactcctgcgacataaaaaagccgtgtgttgaatgcctgcacttc
aaaagaggaccgtacatcaaagacaacagctgcagcaaaatctgcaaagatgaaattcat
gtagtagaagaattgggtaaaaaagaaaatgcagtcaattgctcctacaaagatgaaaat
gactgtgtggagcacttccagtattacgaagatgagaatggcaaatccaacctgaatgtg
ataaaagagccagagtgtcctgaaggtgcagacatcttggtggttctcttggcggtggct
ggagccgtcctgctacttggccttgttggcttgttaatatggaagcttgtagtcaccatt
tctgaccgtaaagagtttgccaggtttgaggaggaaagagccaaggccaaatgggatacg
gcgaacaatcctttgtataaaggagcaacatccaccttcaccaatgtagcgtacagaggc
aactaa

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