Labrus mixtus (cuckoo wrasse): 132953898
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Entry
132953898 CDS
T10666
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03266
Virion - Herpesvirus
lmix04081
Hormone signaling
lmix04145
Phagosome
lmix04148
Efferocytosis
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
lmix04517
IgSF CAM signaling
lmix04810
Regulation of actin cytoskeleton
lmix04820
Cytoskeleton in muscle cells
lmix05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
132953898
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
132953898
04512 ECM-receptor interaction
132953898
04517 IgSF CAM signaling
132953898
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132953898
04148 Efferocytosis
132953898
09144 Cellular community - eukaryotes
04510 Focal adhesion
132953898
09142 Cell motility
04820 Cytoskeleton in muscle cells
132953898
04810 Regulation of actin cytoskeleton
132953898
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132953898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132953898
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmix04147
]
132953898
04515 Cell adhesion molecules [BR:
lmix04515
]
132953898
04090 CD molecules [BR:
lmix04090
]
132953898
Membrane trafficking [BR:
lmix04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
132953898
Exosome [BR:
lmix04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132953898
Cell adhesion molecules [BR:
lmix04515
]
Integrins
Integrin beta subunits
132953898
CD molecules [BR:
lmix04090
]
Proteins
132953898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
132953898
NCBI-ProteinID:
XP_060882237
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All DBs
Position
20:14801487..14813262
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AA seq
781 aa
AA seq
DB search
MGTFFLVFLFLSAATNVFGASICTSRGVTTCQQCLAVDPSCAWCSQEEFGKRGSGVSRCD
LKQDLLDGGCTEDALEFPSSTLTIHKDDPLSDKSSGTAGVTQIKPQKVHMTLRPGDAKQF
TVSVKQVEDYPVDLYYLMDLSYSMKDDLDRLRTLGNDLAAVMGRTTSNLRMGFGAFVDKT
VSPYMYTYPPEAVANPCDEISTTCQAQFGFKHVLSLTESVARFNDEVDKQQVSRNRDSPE
GGFDAIMQAVVCKDKVGWRPDASHLLVYTTDAKTHLALDGRIAGIVQPNDGQCHLDIDNV
YNKSNVLDYPSLGLMTEKMSENNINLIFAVTSYVLDLYKSYSKLIPGTTVGMLSEDSGNV
IGLIEQAYKNIRSKVELELVDVPEELTLSFNASCKKEEVIPGLKSCSGLVIGDTVSFSVE
AKLRDCPKEKSRTFTIKPRGFKDSLEVTVDFACGCDCEAMAEGNSSLCSNGNGTYECGVC
QCHQGRLGPRCECSVEDYRPSDDANCIPDPDSLICNGKGNCLCGQCSCHSNDFGQVWGKY
CECDDFSCLRFKGALCSNHGKCSCGFCLCDSGWKGENCNCSTRIDTCWSSNGLQCSGRGY
CECGVCQCTQPGAYGETCEKCPTCPDSCDIKKPCVECLHFKRGPYIKDNSCSKICKDEIH
VVEELGKKENAVNCSYKDENDCVEHFQYYEDENGKSNLNVIKEPECPEGADILVVLLAVA
GAVLLLGLVGLLIWKLVVTISDRKEFARFEEERAKAKWDTANNPLYKGATSTFTNVAYRG
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgggaactttctttctggttttcctctttttgtcagcggcaacaaacgttttcggtgcc
agcatctgcacatcacgaggagtcaccacttgtcaacagtgcttggccgttgatcctagc
tgtgcatggtgctctcaggaggagtttgggaaaaggggatccggtgtgtcccgctgtgac
ctgaagcaggatctactggatggaggatgcacagaggatgctctggagtttccgtccagc
acactgactattcataaggacgacccgctcagcgacaagtcctcagggactgctggtgtc
actcagatcaagcctcagaaagtccacatgacactaagaccaggtgatgccaagcagttc
accgtgtcagtgaaacaggtggaagattacccggtagatctctactatctgatggacctt
tcatattcaatgaaggatgacttggatcggcttcgcacgttgggcaacgaccttgccgca
gttatgggccgcaccacaagcaacctacgcatggggtttggagcatttgtggacaagacc
gtctctccttacatgtacacatatcctccagaggcagtggcaaacccttgcgatgaaatc
agcactacatgccaggctcaatttgggttcaagcatgtgttgtcactgacagagagtgta
gctcgcttcaatgacgaggtggataaacagcaggtgtctagaaacagagattctccagag
ggtggatttgatgctatcatgcaggcggtggtgtgcaaggacaaggttggctggcgtcct
gatgcctcacatcttctggtatacaccactgatgccaaaactcaccttgctctggatgga
cgtatagctggaattgttcagcccaatgatggacaatgtcaccttgacattgacaatgtt
tacaacaagtccaatgtgctggactatccttccttggggctcatgacggagaaaatgtct
gaaaacaacatcaatttaatttttgctgtgaccagctatgtacttgatctttacaagagt
tacagtaaacttattcctggaacaactgtgggaatgctctccgaagactcagggaatgta
attgggctcattgagcaggcttacaagaatatccgctcaaaagtggagctggagctggta
gatgtcccagaagagttaactctctccttcaacgcctcttgcaagaaagaagaggtcatc
cctggactcaagtcctgctctggcctcgttattggtgacacagtgtcattcagtgtggag
gccaagttgcgagactgccccaaagagaagagtcgcacatttactatcaaacctcgaggc
tttaaggattccttggaggtcacagtagattttgcgtgtggctgcgactgtgaagcaatg
gccgaaggcaacagctcgctctgtagcaatggcaacgggacgtacgagtgcggcgtgtgt
cagtgtcaccaaggtcgtctcggcccacgatgtgaatgttcagtggaagactacagacca
tctgacgatgccaactgcatcccagatccagacagtctgatctgcaatgggaagggcaac
tgtttgtgcggccagtgctcctgccattcaaatgactttggtcaggtgtggggcaaatac
tgtgaatgtgacgacttcagctgcctgcgcttcaaaggggcactgtgttccaatcatggg
aagtgtagttgtgggttctgcctgtgcgattctggctggaaaggagagaactgtaactgc
agcacacgcattgacacctgctggtccagcaatggcctgcagtgcagcggccgggggtac
tgcgagtgcggggtctgtcagtgcacccagcctggtgcctacggagaaacctgtgagaaa
tgccccacctgtcccgactcctgcgacataaaaaagccgtgtgttgaatgcctgcacttc
aaaagaggaccgtacatcaaagacaacagctgcagcaaaatctgcaaagatgaaattcat
gtagtagaagaattgggtaaaaaagaaaatgcagtcaattgctcctacaaagatgaaaat
gactgtgtggagcacttccagtattacgaagatgagaatggcaaatccaacctgaatgtg
ataaaagagccagagtgtcctgaaggtgcagacatcttggtggttctcttggcggtggct
ggagccgtcctgctacttggccttgttggcttgttaatatggaagcttgtagtcaccatt
tctgaccgtaaagagtttgccaggtttgaggaggaaagagccaaggccaaatgggatacg
gcgaacaatcctttgtataaaggagcaacatccaccttcaccaatgtagcgtacagaggc
aactaa
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