Labrus mixtus (cuckoo wrasse): 132973443
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Entry
132973443 CDS
T10666
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132973443 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132973443 (cnot1)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132973443 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132973443 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
132973443
NCBI-ProteinID:
XP_060892901
LinkDB
All DBs
Position
4:complement(31479571..31503613)
Genome browser
AA seq
2421 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISTLCYAVDNPLHYQKSLKPSAHLFTQLSKVLK
LSKVQEVIFGLALLNSSNADLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTMMESSLAEFMQEVGYGFCANLDECRNIIIQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDGSQAHTWNVEVLIDVVKEVNPNLNFKEVTYE
LDHPGFIIRDSKGLHMVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVFC
FADFPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFGFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAG
SVSQEVSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQMDPLSGMGSL
NLGGTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLSSQLPGMD
SGPLGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGIGSGLGSGLGIPTVNTDPFGTRKMS
TPGLNPPTFQQTDLSQVWPEANQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQR
FKDSTIKREREVFNCMLRNLFEEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLAL
RYVLEALRKPYGSKMYYFGIAALDRFKNRLKDYPQYCQHLASIAHFLQFPHHLQECVQYI
EYGQQSRDPPVKMQGSITTPGSLALAHVQAQSQPGGPKPPQPGQPSTLVTTATTTTTVAK
TTTITRPTPSTFKKDVPPSINTTNIDTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSN
MTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETY
RNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKNKPILYTDLEVKSLLLEAYLKGQQ
ELLYVVPFVAKVLESSLRSMVFRPQNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNL
SLDINDLKPGTLLKDKEKLKSLEEQLSAPKKETKPPEEMLPVSTTGDFVPFAAPPSTPAA
TTTTCTTTGPPTPQFSYHDINVYALAGLAPHININVNIPLLQAHPQLKQCVRQSVERAVQ
ELVHPVVDRSIKIAMTTCEQIIRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLL
MSIATNLKNSFAAALRAPTPQQREMMEEAAARVAQDNCELACCFIQKTAVEKAGPEMDKR
LATGSPLFQEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFA
RNVPGFLPSNDLSQPTGFLAQPMKQQAWATDDVAQIYDKCMADLEQHLHAIPPALAMNPL
TQALRSLLEAVVLARNSRDGIAALGLLQKAVEGLLDATSGADADLLLRYRECHLLVLKAL
QDGRAYGPQWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDLHLAQSMENGLH
YMAVAFAMQLVKLLLVDERSVSHVTEADLFHTIETLMRTCAHSRANAPEGLPQLMDVVRS
NYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKA
FSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAASAAIIRAKCYHN
LDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLIQDHDVRQTEFQQLPYHRIFI
MLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHT
PQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQILYKGTLRVLLVLLHDFPEFLCDYHY
GFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVMPSQ
FKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGNRYNIQLINALVLYVGTQAIAHIHNKGS
TPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEA
NTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWSHDFVHCAPEIEKLFQS
VAQCCMGQKQAQQVMEGTGAS
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acaaagaaaaattaccgagccagccagcaagaaatacagcatattgtaaatcgtcacggc
cctgaggcagacaggcatctactacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaggactttcaccagacacagtttttgatccaggagtgtgtgtcg
ctgatatccaagccaaactttatctctactctgtgttacgccgttgacaatcccctgcat
taccagaagagtttgaagccatcggcccatcttttcactcaactgagtaaagttctaaaa
ctcagcaaggtccaagaggtgatatttggccttgcattactcaactccagcaacgcagac
cttcgaggttttgctgcacagttcatcaagcagaaacttccagacctcctgcggtcatac
gttgacgcagatcttggaggaaatcaggaaggtggcttccaagacattgccatagaggtc
ttgcacctactgctgtcccatctactgtttggccagaaaggagccagtggggttggccaa
gagcagattgacgccttcctcaagacactttgtcgagatttcccccaggagcgctgccct
gtggtgcttgcaccactgctgtaccctgaaaaacgggacattctcatggataggattctg
ccagactcgggggagttagctaagaccatgatggagagttctcttgcagaattcatgcaa
gaagttggctacggcttctgtgcaaatctggatgagtgcagaaacataatcatccagtat
ggggtgagagaggtgacagccagccaggtagccagggttctaggcatgatggctcgtaca
cactccggcctaactgatgggatcccactacagtccatctctgccccaggcagtggtatc
tggagtgatggtaaagataagaacgatggttcacaggcacacacatggaacgttgaagtt
ctcattgacgttgtgaaggaagtgaatccaaacttgaacttcaaagaggtgacctacgaa
ctcgaccacccaggctttataatccgggacagtaaaggtctgcatatggtggtgtatggc
attcagagggggttgggtatggaggttttccctgtcgatctcatctatcgaccatggaaa
cacgctgagggacagctgtcattcattcagcactccctgatgagtccagaagtgttctgc
tttgctgacttcccttgccacactgtggctattgacatccttaaggccccaccagaggat
gacaatagggagattgcaacctggaaaagtctggaccttgttgagagcttgctcaggctg
tctgaggtgggtcagtatgagcaagtgaaacagctttttggatttccaatcaagcactgt
ccggatatgttggtgctagcgttgctgcagatctccacctcctggcacacactgcgccat
gaactcatctcaaccctaatgcccatctttctgggcaaccatcctaactctgccattatc
ctgcactatgcctggcacggacagggacagtctccctccattcgtcagttaattatgcat
tcaatggctgagtggtacatgagaggggagcagtatgaccaggccaaactttctcgcatc
cttgatgtggcccaagacctgaagtctctatcgatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgccgtgaatacctcaaacttgataaatgg
ctgactgacaaaatcagagagcatggagaaccttttatccaggcatgtgtgacattcctg
aagaggcgctgtccatccattatggggggtttggccccagacaaggaccagcctaaaagc
gcccaactccccccggagaccttagccaccatgctagcctgcctgcagtcctgcgcaggg
agcgtatcccaggaggtgtcagagactatcctgaccatggttgccaactgcagcaatgta
atgaataaagcccggcagccaccacctggggtaatgccgaaaggacgcgcccccagcacc
agcagcctggatgccatctctcctgtacagatggaccctctatcaggcatgggttcttta
aaccttgggggcacagccacctcccacactcaaagcatgcagggtttcccaacctcactg
agttcagcttttagtaatccccaatccccagcaaaagctttcccaccactttcaaacccc
aaccccagcacaccatttgggggcataggcagcctgtcctcgcagctccctggcatggac
tctggtcccttgggctcaggcattggctcaggcattggctcaggcattggctcaggcatt
ggctcaggcatcggctcaggcatcggctcaggcatcggctcaggcatcggttctggtctg
ggttctggtctgggaataccaacagtgaataccgatccatttggtaccaggaagatgagc
acaccgggcctgaacccacctacctttcagcagactgacctgtctcaggtgtggccggag
gctaaccagcactttagcaaggagatagatgatgaagcaaacagttatttccagcgcatc
tacaaccacccacctcacccaactatgtctgtggatgaagtactggagatgctgcagagg
ttcaaggattcaactatcaagcgggaacgagaggttttcaactgcatgctgcggaacttg
tttgaggagtaccgattcttcccccagtacccagacaaggagctgcacatcactgcctgc
ctttttggtggcattattgagaagggtcttgtgacctacatggcccttggtttggccctc
cgatatgttcttgaagccttaagaaaaccctacggatccaaaatgtattattttggaatt
gcagccctagataggttcaagaacagactaaaggactaccctcaatattgtcaacatctg
gcttcaattgcccacttcttgcaattcccccaccatttacaagagtgtgtgcagtatatc
gagtatggccaacagtcacgggaccccccggtgaagatgcaaggctccatcaccacccct
ggcagtctggcactggcacatgtacaagctcagtcacaaccgggtggacccaaacccccg
cagccaggtcagcccagcaccttagtcaccactgcaacaactacaacaacagtggcaaag
accaccaccattacaagaccaacacccagcaccttcaagaaggatgtacctccctctatc
aacacaaccaacattgataccttgctggtggctactgaccaaacagaaaggattgtagag
cctccagaaaatgtccaggagaagattgcttttatcttcaacaatctttctcagtcaaac
atgacacagaaggttgaggagttgaaagagacggtgaaggaggagtttatgccctgggtg
tctcagtatctggtgatgaagcgtgtcagtattgagcccaacttccacagcctctattcc
aactttctggatactctgaagaaccctgagtttgtaaagatggtcctgaatgagacctat
aggaatatcaaggttctgttgacctctgacaaggcggctgccaatttctctgatcgctcc
ctgctgaagaacctgggccactggttgggcatgattacactggccaaaaacaaacccatt
ctttatacagatcttgaagtgaaatctctactattggaagcctatttgaaaggccagcag
gagctgctgtatgtggttccctttgttgccaaggttttggaatccagtcttcgcagcatg
gttttcaggccccagaatccctggaccatggccatcatgaatgttcttgctgaacttcat
caagaacatgacctcaagcttaacctgaagtttgagattgaagttctgtgcaagaacttg
tctctggacatcaatgacctgaagccagggaccttgctgaaggacaaggagaagctgaag
agtctggaggagcagctgtctgcaccaaagaaggagacaaagcctccggaagagatgttg
ccggtttctaccacaggagactttgttccatttgcagctcctccatcaaccccagctgcc
accacaaccacttgcacaaccacagggccccccaccccccagttcagctaccacgacatt
aatgtgtatgccttggcaggccttgcgccacacatcaatattaatgtcaatatccctctg
ctccaggcccatcctcagttgaagcagtgcgtacggcagtcagtagagcgagctgtccag
gagctggtgcacccagtagttgaccgctctatcaaaattgctatgacaacctgtgagcag
atcatcaggaaggacttcgctctggattctgaggagtcccgcatgcgtgtggctgcccac
catatgatgagaaacctgactgccggcatggccatgatcacctgcagggagcccctgctc
atgagcattgccaccaacctcaaaaacagctttgctgctgcactaagggcaccaacacct
caacagagggaaatgatggaggaggctgcagccagggttgcccaagataactgtgaactg
gcgtgctgctttattcagaaaacagccgtggagaaggctggtcctgaaatggacaagaga
cttgccacggggtctcctctcttccaggagtttgagctgaggaagcatgcacgtcaagag
ggacgccgctattgtgatcccgttgttctgacttaccaggctgagcgtatgcctgagcag
atcagactcaaggtgggaggagtggaccctaaacaactggcagtatatgaggagtttgca
aggaatgttccaggtttcttacccagcaatgatctctcccaacccactggcttcttggct
cagcccatgaagcaacaggcatgggccacagacgatgtggctcagatctatgataaatgc
atggcagacttggagcagcatcttcatgccatccctccagctcttgctatgaaccccctg
acacaggctctgcgcagcctgctggaagctgtggtcttggccagaaactccagagatggc
attgctgcacttggcctgctgcagaaggctgtagaaggtcttcttgatgctactagtggg
gctgatgccgacttgctgctccgctacagggagtgccacctgcttgtccttaaagctcta
caggatggacgtgcctatggaccacagtggtgcaataagcagatcaccaggtgtctgatt
gaatgccgtgacgagtacaaatacaacgtagaagcagttgagcttctgatcaggaaccat
cttgtgaacatgcagcagtatgacctacacctggcacagtcgatggaaaatggactgcac
tacatggccgttgcttttgccatgcagttggtgaagctgctgctggtggatgaacgcagt
gtgagccatgtcacagaggctgacctctttcacacaatcgagaccttaatgaggacctgt
gcacactccagagcaaacgcacctgaggggcttccccaactgatggatgttgttcgctcc
aactatgaggccatgattgaccgggcccacggtggacccaacttcatgatgcactctggg
atttcccaggcttcagagtatgatgatcctccaggcctgagggagaaggcagagtacctc
ctcagggaatgggtcaacctgtatcactcagctgcagctggcagggacagcaccaaagct
ttctctgcatttgttggccagatgcaccagcagggaatcctgaagacagatgacctgatc
acaaggttcttccggctgtgcacagaaatgtgtgtggagatcagctatcgggcacaagct
gagcagcagcacaacccagcagccagtgcagccatcatcagagccaagtgttaccacaac
ctggatgcctttgttaggctgatagccctgctggtcaaacattcaggagaggccacaaac
acagtgacaaaaattaacctcctcaacaaggtgctgggtattgtagttggggtgttgatc
caggaccacgatgtccgtcagacagaattccaacagctgccctaccatcgcattttcatc
atgctgctgctggagctcaacgctcctgaacatgtcctggagaccattaacttccagaca
ctcacagctttctgcaataccttccacatcctgagacccaccaaagcacctggctttgtg
tacgcctggctggaactcatctcccatcgaatcttcatcgccaggatgcttgcacacaca
ccccagcagaagggttggcccatgtatgcacagctgctgattgatctcttcaaatacctg
gccccgttcctgaggaatgtagagctcaacaaacctatgcaaatcctctacaagggcaca
ctgcgagtgctcctggtcctgctgcatgacttcccagagttcctgtgtgactatcattac
ggcttctgtgatgttatcccacccaactgcattcagctccgcaacctcatcctcagtgcc
tttccacgcaacatgaggctccctgaccctttcacacccaatctcaaggtggacatgctg
agtgagatcaacattgcaccccgtatcctcaccaacttcacaggcgtcatgccctcccag
ttcaagaaagacctggactcgtatctgaagactcgatcccctgtcactttcttgtctgag
ctgcgtagcaacctgcaggtgtctaatgagccaggaaaccgttacaacatccagctgatc
aatgctctagtgttgtatgtgggcacacaggcaattgctcacattcataacaagggcagc
accccctccatgagcaccatcacccactctgcacacatggacatcttccagaacctagct
gtggacctggacactgaggggcgttacctgttcttgaatgcaatcgccaatcagctgcgc
taccccaacagccacactcactacttcagctgcaccatgctgtatctgtttgcggaggcc
aacactgaggccatccaggagcagatcaccagggttctgctggagaggctgattgtgaac
aggcctcacccatggggtctcctcatcaccttcatcgagctgataaagaatcctgccttc
aagttctggagccatgactttgtgcactgtgcccccgagattgaaaagctgttccagtca
gtggcccagtgctgcatgggacagaagcaggcccagcaggtgatggagggcaccggtgcc
agctag
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integrated database retrieval system
