Labrus mixtus (cuckoo wrasse): 132974132
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Entry
132974132 CDS
T10666
Symbol
skic3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132974132 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132974132 (skic3)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
132974132 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_11
TPR_17
TPR_14
TPR_19
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
HAT_Syf1_CNRKL1_N
Fis1_TPR_C
YceG_bac
SipA
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
132974132
NCBI-ProteinID:
XP_060893952
LinkDB
All DBs
Position
5:complement(14293401..14308348)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSSKEVKTALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQSQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKVELPDIYQKLVDLYASSDKTKCYEMIK
KLSDVYQSDKEYLKLAKVWRQLLQLKEEESADKKELLQLWQQMTQLLSDCLKEGGHDPTK
ETQQHLITAFEKAMVLMDPVPGEEHKKVSADYVKCLSNLPQEEVKIKEACESMLTLYPDQ
SYPLEVLCSHYLRKGVLNEDALSCFSRLLALDPNSGLGLLGLGTKALQEGRYKDAIKDLA
QGLKKKSSSTGWYSLAEAQLKMHRYSDCALSCSQGLTVCDSGDMEVRGKLLRLKLEALVR
SGGQTAAEQALDTFSQIPDAGKYPVLMALKGCAYLNKGHVEQALKESSELLASDPKLAQG
FVLRGLAQLAQEQQELAEESFLMATSLSPDSGEYFFLLGKLYWDMGEETRKDRTKAQTHF
LKAAKLDPHLGCVFRYLGHYYREVASDPGRARGCYKKAFELDDDDAESGAASVDLSMEQG
HMAAALASLQSVIEKATPGSAKWAWMRRGLYHLKVGEHQQATADLQAALRADPEDWVCWE
CLGEAYLNRHSFTAALKAFSKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQ
DYVPALKGLGECQLALAKSLMEDCRDGGAIDLIQQAIQNLYRAVTLRPDLSCLWKLLGDA
CTAVSTVSPNRAQVVVPAELAGLNPNTQNPTLNKAQALKVGERCYARALKLMSEVPSLWY
DLGLNLYHQSRLPSITEEDQNSPSLLLEKAQLCLKKAIMKDSGNYCYWNALGVISMSKGV
ENFALAQHCFIKSTQVESNNVTAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIG
QALIAERVGSYDTMDLFRHTTELSTHIEGVKGYAFWVCSTLLDKNNRDSELYRYNIVQMN
AISAAQVALSKYTERIQSDPDAFIMLGFLNEHLQLKRQALHAYQRAVELLQSMTSTEELA
FALGSYGRALCTSGQWEEAVRVYNSTPLQELSDLVGLALAYCRAGLISESINAYERALAV
ASSEKEKAYILTALALLQHRQGNLDPAKTLLFKCSMLKEPISESLLCLCALGLVHNDATL
AAAALSELLKRGPGSGNVVEQRCLLTCTLLALQGNYSAVQREASRAVHSNPGNPSLWALL
SRLVPQYHPRKANGGAMAGQVACLSSMTQGKRALLHSGLNQLANGRHSGEDSHRNALKTM
QRAVLLCPDDPATWAGLMAACHAENTSCYLSGSAPRIQGLEQTLMSMVSEKVQSVEEIER
PLVQTLEGWVLQQAVTGLMLGGQLEQAEALCSQVLNVSPEHPAVMLSLTQVQCHHLLVAN
TGAVLPDSVLDQLNKTVMMNPTNVGAWHWLAEVYRSQGLLVQAVMAYKQSLQIASQLGLH
SSQVASLLRLALLALGPCMAGIPGNDWTDLILEATTEVLKLGSSPMALLFQALLQYVTKT
AARETRRLLERLVYAPSQDIPVTVVQVAGWYLLRHLHAKNDQELINVLLQHAKKNGHQRL
LEFHATLA
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaagaagtgaaaacagcgctgaagagtgccagagaggccatcaaaaacaaa
gagttcaaagaggctctgaaacactgcaaggctgttttgaaacttgagaagaacaattat
aatgcatgggtgttcatcggcttggctgccagtgaactggagcagccggatcagtcacag
actgcttataaaaaggctgtggagctggagcctgagcagctacttgcatggcagggcttg
gctaatctttatgagaagacagatcagtgggatttcaaagtagagcttccagacatctat
cagaagctcgtggatctgtatgcaagctctgacaaaaccaaatgttatgagatgattaaa
aagctatctgatgtctatcagtctgacaaagagtatttgaagttggcaaaggtttggcgc
cagctccttcagctgaaggaggaggagtctgcggacaagaaggagttactgcagctttgg
caacagatgacccaacttctctcagactgcctcaaggagggagggcatgacccaacaaaa
gaaactcaacagcatttaatcacagcatttgagaaggccatggttctcatggatcctgta
ccaggagaggaacacaagaaggtctcggctgactatgtcaaatgtctttctaatcttcca
caagaagaagtcaaaataaaagaggcatgtgagtctatgctgaccctttaccccgaccaa
agttatcctcttgaagtcctttgttctcactacctcagaaaaggtgttcttaatgaggat
gcattgagctgtttctcacgactcctggctctggaccctaacagtggattaggtctcttg
ggtctgggcaccaaagccctgcaagaaggaaggtataaggacgccataaaggacctagcc
caagggctgaagaaaaagagctccagtacaggatggtacagtctggctgaggctcagtta
aaaatgcacagatactcagactgtgctctgtcatgctcccaaggtcttacagtgtgtgac
tctggagacatggaagttagaggcaaactgctcaggctgaaactagaggcgttagtcagg
agtggaggacagacggctgctgaacaggctttggacacattttcccagatcccagatgct
ggaaaatacccagttttaatggccctgaaaggatgtgcctacctaaacaagggacacgtt
gaacaagctcttaaggagtcgtcagagctgctggcctccgatcctaagctggcccagggg
tttgttctaagaggactggcacagttggctcaggaacagcaggagctggcagaggaaagt
tttctaatggcgaccagcctgagtccggacagtggagagtattttttcttgcttggtaaa
ctctactgggatatgggagaagagactcgtaaagacaggactaaagctcagacacatttt
ctgaaggctgcaaagttggacccacatctcggttgtgtgttccgctaccttggacattat
taccgagaggtggcgagtgatcccggccgggctcgaggctgctataagaaggcctttgag
ctggatgatgatgatgctgagtctggagctgcctcggtggatctcagtatggagcagggc
catatggccgctgccttagcatcacttcagtctgtgattgagaaagccactccgggctca
gctaaatgggcttggatgagacgagggctttaccacctgaaggtcggagaacatcaacaa
gctacagctgatctgcaggcagctctgagagcagaccccgaggactgggtgtgttgggag
tgtttaggtgaggcttacttaaaccgccatagcttcacagcagctctgaaggccttcagt
aaggcccatcagcttcaaccctcctccatctacagtgtgtaccaggctgctgctatcaaa
caaactctaggcaaattcaaggaggcagttgcagagtacctgcagatcacagcacaacag
gactacgttcctgctcttaaaggtcttggggaatgccagctagctctagcgaaaagttta
atggaggactgcagagatgggggagccattgacctcattcaacaagccatacagaacctt
tacagagctgtgacgctgcgtcctgacctgtcctgtttgtggaaactgctcggagatgct
tgcactgcagtaagcactgtgtcgcctaacagagcccaggttgtagtccctgccgagctg
gctggtttgaaccccaacacccagaaccccacactgaataaggcccaggcactgaaagtc
ggtgagaggtgttatgcccgagctttgaagctgatgtctgaggtccccagtctttggtac
gacctaggactcaacctctaccaccagtccagacttcccagtatcactgaggaagaccag
aattctccatccctgctcctagagaaggcccagctgtgtttgaaaaaggcgatcatgaag
gacagtgggaactactgctactggaatgcattgggggtgatttccatgagcaaaggtgtt
gagaactttgctctggctcaacattgcttcatcaagtccacacaagttgaatcaaataat
gtcactgcttggactaaccttggtaccctgtatttgaagaaggacaatatagagcttgca
catgaggccttcaagattgcccagtcactggagccgctttacgtcaactgctggattgga
caggcgctgatagcagagagagtgggaagctatgacaccatggatcttttcaggcacacc
actgaactcagcactcatattgagggagtgaaaggttatgccttttgggtttgttccacc
ctgttggataagaacaacagagactctgaactgtaccgctacaacatcgtccagatgaac
gccatctctgccgctcaggttgctctcagcaagtacacagagaggatccagtctgaccct
gatgccttcattatgcttggcttcctgaatgagcatctgcagctgaagaggcaggcctta
catgcttatcaacgagctgttgagctgcttcagtccatgacctcaacagaagagctggct
tttgctctgggcagctatggccgtgctttgtgcacgtcaggccagtgggaggaggcggtg
cgtgtttataattccactcccctgcaggagctcagtgatctggttggcctggcgctggcc
tactgcagggcaggactcatctcagagagcatcaacgcctatgaacgtgccttggctgtg
gcatccagtgagaaggagaaggcttacatattgacggctctggccctccttcagcaccgg
cagggtaacctggatccagccaagactctgctgttcaaatgctcaatgttaaaagagcca
atctcagagtctctgctgtgtttatgtgcactgggattggtccacaatgatgctacatta
gctgctgctgccctgtctgagctgctgaagcgaggtccaggctcagggaatgttgtcgag
cagagatgtctacttacctgcactctactggccctgcagggcaactacagtgccgtgcaa
agagaggcttccagagctgtgcacagcaaccctggaaacccctctctgtgggccctgctg
tccagactggtaccacaataccatcccaggaaagcaaatggtggagcgatggctggtcag
gtggcatgtctctctagtatgacccaaggaaagagggcgctgttgcacagtgggttgaac
cagttggcaaatgggagacactctggagaggacagtcacaggaatgcactgaagactatg
cagagagctgtgctgctctgtcctgatgatccggcgacatgggcggggttaatggctgcc
tgtcacgcagaaaacacttcctgttatctctctggttccgctcctcgcatacaaggactg
gaacaaaccctcatgtcaatggtttctgagaaagtgcaaagtgtggaggagatagagcgc
cctcttgtccagactctagaaggctgggtactacaacaggcagtgactggtctcatgtta
ggcgggcagctggagcaggcagaagccctctgctctcaggtgctgaatgtttccccagaa
cacccagcagtgatgctgtcactgacccaggtgcagtgtcatcacctccttgttgccaac
accggtgctgtcctcccagactctgtattggaccagctgaacaaaactgtgatgatgaac
cccaccaatgttggtgcatggcactggctggccgaggtgtaccgcagccagggcctgctg
gtccaggcagtcatggcttacaagcagagtctgcagatcgcctcacagctcggcctgcac
agcagccaggtggccagcctgctccggctagccctgctagccctaggaccctgtatggcg
ggcatcccaggaaatgactggacagatctcatacttgaagccaccactgaggtcttgaag
ctgggttcttcacctatggccctccttttccaggccctgctccaatatgtgactaagacg
gctgctagggaaaccaggcgtttgttggagaggctggtgtacgccccctctcaagacatc
ccagtgacagtggtgcaggtggccggctggtacctcctcagacacctgcatgccaaaaac
gaccaagagctcatcaatgttcttttgcaacacgccaaaaagaacggacatcaaagactg
ctggagtttcacgcaacgcttgcctaa
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integrated database retrieval system
