KEGG   Labrus mixtus (cuckoo wrasse): 132976064
Entry
132976064         CDS       T10666                                 
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b
  KO
K08131  collagen type IX alpha
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix04510  Focal adhesion
lmix04512  ECM-receptor interaction
lmix04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132976064 (col9a1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    132976064 (col9a1b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132976064 (col9a1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:lmix00535]
    132976064 (col9a1b)
Proteoglycans [BR:lmix00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   132976064 (col9a1b)
SSDB
Motif
Pfam: Collagen Laminin_G_3 Laminin_G_2 Laminin_G_1
Other DBs
NCBI-GeneID: 132976064
NCBI-ProteinID: XP_060896984
LinkDB
Position
6:4586116..4613884
AA seq 978 aa
MGEVKRIILLYSLCCCYLIPQCLCTGRHAQSVRFSSQVGIHGEQQFMCPQINVGEDRFPG
FYIMSQFHIAELARRGTVKQVPGSSPRHVAYQIGPAFNFRINTRSAYPLGLPEEFAFVSV
LRMSGSTIDKKWNIWQMQDVNGNEQLSVRLNGESKALEFTFPLQGSRRQTVVFSDASSLF
NDQWHTVLLNVSARSVTLFVDCVMVGSQTVQPRQKVRLDGFTLIGKLKDNPVVPVPFELQ
SMIIHCDVTRAREGVCHDLPARTSLKQIQLGLFCRGLLQPNKSQRKDYSKTFPAPRVEIM
AQAPSVRGPLLVLLLQLVLICSAQRSQGPAGPPGPAGVPGIDGVAGERGDDGEEGLTGPD
GDAGKPGSSGLPGIPGNDGLTGPIGDPGPDGPLGQKGEPGKSGPRGAAGVGQDGPPGPPG
PGGLTGEVGKGGPPGAMGVRGPQGPRGTTGPRGAAGMQGSADLCTNSCPPGTSGHPGLPG
MKGHKGVKGEAGEPGKQGHKGEEGDQGSPGEVGSQGPMGPQGIRGATGMMGSKGEMGARG
LDGEPGPQGVAGATGDQGQRGVMGEPGPKGELGVLGARGITGLPGPKGDAGLPGVDGREG
IPGMPGAKGGIGKAGVPGEVGLQGLPGLPGSPGPKGLSGSKGDAGQLGFSGTMGSAGKTG
ERGEQGEVGPVGPIGESGDIGVRGPLGPAGKPGARGPKGDPGLPGLPGPHGLPGMKGERG
ERGEAGPRGEQGVQGDEGNPGDKGEFGETGEAGAKGEGGNPGEPGRRGPEGSRGQPGIEG
PPGSPGPRGMQGNRGATGVRGTQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRRPESG
VAGLPGKPGLPGPPGSPGDNGFPGQSGIRGLPGLKGPPGALGVKGPKGELGDRGSRGPTA
RGPKGQPGAPGLPGEPGKPGYGQDGRDGQRGPPGTHGLPGVPGPPGSAGPNGYCDPSACN
LQAGAAHQSLDVKGPAGN
NT seq 2937 nt   +upstreamnt  +downstreamnt
atgggagaagtcaaaagaatcatcctcctgtactctctgtgctgctgctatctgatccca
caatgtctttgcacaggacgtcacgctcagtctgtgagattttcatctcaagttggtatt
catggggagcagcagttcatgtgccctcagatcaatgtcggggaggatcgtttcccagga
ttttacatcatgtcccagttccacattgcagagctggcaagaagagggacagttaaacag
gtccctggatcatctcctcggcatgttgcctatcaaataggcccagcgtttaacttcagg
atcaacacaagatcagcgtaccccctgggacttccggaggagtttgcctttgtgtccgtg
ctgcgaatgagtggcagcaccatcgataagaagtggaatatctggcagatgcaggatgtg
aacggtaacgagcagctgtccgtcagactcaacggggagtccaaggctctggagtttacc
ttcccgctgcagggcagcaggaggcagactgtcgttttcagcgacgcgtcttctctcttc
aacgaccaatggcacacagtcctgctcaacgtcagcgcgcgctccgtcaccctgtttgtg
gactgcgtcatggtcggttctcaaactgtgcagccgcgacaaaaagtcagactggatggc
ttcacgttgattgggaagctcaaggacaacccagtggtgccagttccgtttgaactccag
tcgatgattattcactgtgacgtgacgcgagcccgggaaggcgtttgtcatgatctccca
gccaggacatcgctgaagcagattcagttgggtttgttttgtcgggggctccttcagccc
aacaaatcccagagaaaggactactctaaaacctttcctgctccacgggtggagatcatg
gctcaggcccccagtgttagagggccactgctggttctgctcctgcagcttgtccttatc
tgctccgctcaaaggagtcaaggacctgctggccctcctggacctgcaggtgtcccggga
attgatggcgttgctggggaaagaggagacgatggcgaggagggtcttactgggcctgat
ggagatgcgggtaaaccgggctcttcgggactacctggaattcccggtaacgatggtctg
accggccctattggagaccccgggcccgacggccccctcggacagaaaggggaacctgga
aaatctggacctcgtggagcagctggtgttgggcaagatggacccccgggaccacccggg
cctggaggacttacaggagaagttggaaaaggtggaccacctggggccatgggtgtcaga
ggaccacaaggacctcgtggaacaacaggaccccgaggtgcagctggaatgcagggcagt
gccgacctgtgtacaaactcatgtccacctgggacttctgggcatcctggccttcctggc
atgaagggccacaaaggtgtaaaaggtgaagcaggggaacctgggaaacaagggcacaag
ggcgaggagggagaccagggaagtccaggggaggtcggatcccagggaccaatgggtcct
cagggaatacgtggagccacaggaatgatgggttccaaaggagagatgggagctcgaggt
ctggacggagagcctggtccccagggtgttgccggggcgactggagatcaaggccagagg
ggcgtgatgggtgagccggggcctaaaggtgaactgggcgttctaggggcaagaggaatc
accggtctgccaggtcccaagggagacgctgggttgccgggtgtggatggtcgtgagggt
attcctgggatgccgggagcaaagggaggcattgggaaggcaggcgttcctggagaggtt
ggacttcaggggcttcctggtttgcctggttcacccggaccgaaaggcttgagcggctct
aagggagatgctggtcagttgggcttttctggaacaatgggatctgccggcaaaacaggt
gagcgtggagagcagggagaggtgggaccggtgggacccatcggtgaatctggagatatt
ggagtgagaggccccttaggtccagccggaaagccaggtgcaaggggacctaaaggtgac
cccggcctgcctggtctccctggtcctcatggtctgcccgggatgaaaggagagcgggga
gagcgtggagaagcaggacctagaggagagcagggagttcaaggtgatgaaggaaatcct
ggcgacaaaggggaatttggtgagaccggagaagctggagctaaaggagagggcggtaac
cctggagagcctggtagacggggcccggagggaagtcgagggcagcctggcatcgagggg
ccgcccggctcacctggaccacggggcatgcaggggaacaggggagcaaccggagtcaga
gggacccagggtcccgcgggaaaagagccgagcgatcaacacatcaaacaagtttgcatg
cgagtcatgcaagaacagctggctcagttagctgctagtttaaggagacccgagtctggc
gtggctggtttacctggaaaacctggacttccaggacctccggggtcaccgggagacaat
ggcttccctgggcagtctggaataagaggactcccaggactcaaggggccgccaggagct
ttgggggtgaaaggacccaaaggtgaattgggagacagaggttccagagggcccactgca
cgaggacctaaaggtcagccaggagctcctggacttcctggtgagccgggcaaaccgggc
tacggtcaggacggtcgggacggacagaggggacccccaggtactcacgggctgccaggt
gtacccggtcctcccggatcagctggtcctaatggttactgcgacccgtcagcctgcaac
ctccaggcaggagccgcccaccagtctctggatgtgaagggacctgcagggaactag

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