Labrus mixtus (cuckoo wrasse): 132976064
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Entry
132976064 CDS
T10666
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b
KO
K08131
collagen type IX alpha
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
lmix04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132976064 (col9a1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132976064 (col9a1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132976064 (col9a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lmix00535
]
132976064 (col9a1b)
Proteoglycans [BR:
lmix00535
]
Extracellular matrix (ECM) proteoglycans
Others
132976064 (col9a1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
132976064
NCBI-ProteinID:
XP_060896984
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All DBs
Position
6:4586116..4613884
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AA seq
978 aa
AA seq
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MGEVKRIILLYSLCCCYLIPQCLCTGRHAQSVRFSSQVGIHGEQQFMCPQINVGEDRFPG
FYIMSQFHIAELARRGTVKQVPGSSPRHVAYQIGPAFNFRINTRSAYPLGLPEEFAFVSV
LRMSGSTIDKKWNIWQMQDVNGNEQLSVRLNGESKALEFTFPLQGSRRQTVVFSDASSLF
NDQWHTVLLNVSARSVTLFVDCVMVGSQTVQPRQKVRLDGFTLIGKLKDNPVVPVPFELQ
SMIIHCDVTRAREGVCHDLPARTSLKQIQLGLFCRGLLQPNKSQRKDYSKTFPAPRVEIM
AQAPSVRGPLLVLLLQLVLICSAQRSQGPAGPPGPAGVPGIDGVAGERGDDGEEGLTGPD
GDAGKPGSSGLPGIPGNDGLTGPIGDPGPDGPLGQKGEPGKSGPRGAAGVGQDGPPGPPG
PGGLTGEVGKGGPPGAMGVRGPQGPRGTTGPRGAAGMQGSADLCTNSCPPGTSGHPGLPG
MKGHKGVKGEAGEPGKQGHKGEEGDQGSPGEVGSQGPMGPQGIRGATGMMGSKGEMGARG
LDGEPGPQGVAGATGDQGQRGVMGEPGPKGELGVLGARGITGLPGPKGDAGLPGVDGREG
IPGMPGAKGGIGKAGVPGEVGLQGLPGLPGSPGPKGLSGSKGDAGQLGFSGTMGSAGKTG
ERGEQGEVGPVGPIGESGDIGVRGPLGPAGKPGARGPKGDPGLPGLPGPHGLPGMKGERG
ERGEAGPRGEQGVQGDEGNPGDKGEFGETGEAGAKGEGGNPGEPGRRGPEGSRGQPGIEG
PPGSPGPRGMQGNRGATGVRGTQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRRPESG
VAGLPGKPGLPGPPGSPGDNGFPGQSGIRGLPGLKGPPGALGVKGPKGELGDRGSRGPTA
RGPKGQPGAPGLPGEPGKPGYGQDGRDGQRGPPGTHGLPGVPGPPGSAGPNGYCDPSACN
LQAGAAHQSLDVKGPAGN
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagtcaaaagaatcatcctcctgtactctctgtgctgctgctatctgatccca
caatgtctttgcacaggacgtcacgctcagtctgtgagattttcatctcaagttggtatt
catggggagcagcagttcatgtgccctcagatcaatgtcggggaggatcgtttcccagga
ttttacatcatgtcccagttccacattgcagagctggcaagaagagggacagttaaacag
gtccctggatcatctcctcggcatgttgcctatcaaataggcccagcgtttaacttcagg
atcaacacaagatcagcgtaccccctgggacttccggaggagtttgcctttgtgtccgtg
ctgcgaatgagtggcagcaccatcgataagaagtggaatatctggcagatgcaggatgtg
aacggtaacgagcagctgtccgtcagactcaacggggagtccaaggctctggagtttacc
ttcccgctgcagggcagcaggaggcagactgtcgttttcagcgacgcgtcttctctcttc
aacgaccaatggcacacagtcctgctcaacgtcagcgcgcgctccgtcaccctgtttgtg
gactgcgtcatggtcggttctcaaactgtgcagccgcgacaaaaagtcagactggatggc
ttcacgttgattgggaagctcaaggacaacccagtggtgccagttccgtttgaactccag
tcgatgattattcactgtgacgtgacgcgagcccgggaaggcgtttgtcatgatctccca
gccaggacatcgctgaagcagattcagttgggtttgttttgtcgggggctccttcagccc
aacaaatcccagagaaaggactactctaaaacctttcctgctccacgggtggagatcatg
gctcaggcccccagtgttagagggccactgctggttctgctcctgcagcttgtccttatc
tgctccgctcaaaggagtcaaggacctgctggccctcctggacctgcaggtgtcccggga
attgatggcgttgctggggaaagaggagacgatggcgaggagggtcttactgggcctgat
ggagatgcgggtaaaccgggctcttcgggactacctggaattcccggtaacgatggtctg
accggccctattggagaccccgggcccgacggccccctcggacagaaaggggaacctgga
aaatctggacctcgtggagcagctggtgttgggcaagatggacccccgggaccacccggg
cctggaggacttacaggagaagttggaaaaggtggaccacctggggccatgggtgtcaga
ggaccacaaggacctcgtggaacaacaggaccccgaggtgcagctggaatgcagggcagt
gccgacctgtgtacaaactcatgtccacctgggacttctgggcatcctggccttcctggc
atgaagggccacaaaggtgtaaaaggtgaagcaggggaacctgggaaacaagggcacaag
ggcgaggagggagaccagggaagtccaggggaggtcggatcccagggaccaatgggtcct
cagggaatacgtggagccacaggaatgatgggttccaaaggagagatgggagctcgaggt
ctggacggagagcctggtccccagggtgttgccggggcgactggagatcaaggccagagg
ggcgtgatgggtgagccggggcctaaaggtgaactgggcgttctaggggcaagaggaatc
accggtctgccaggtcccaagggagacgctgggttgccgggtgtggatggtcgtgagggt
attcctgggatgccgggagcaaagggaggcattgggaaggcaggcgttcctggagaggtt
ggacttcaggggcttcctggtttgcctggttcacccggaccgaaaggcttgagcggctct
aagggagatgctggtcagttgggcttttctggaacaatgggatctgccggcaaaacaggt
gagcgtggagagcagggagaggtgggaccggtgggacccatcggtgaatctggagatatt
ggagtgagaggccccttaggtccagccggaaagccaggtgcaaggggacctaaaggtgac
cccggcctgcctggtctccctggtcctcatggtctgcccgggatgaaaggagagcgggga
gagcgtggagaagcaggacctagaggagagcagggagttcaaggtgatgaaggaaatcct
ggcgacaaaggggaatttggtgagaccggagaagctggagctaaaggagagggcggtaac
cctggagagcctggtagacggggcccggagggaagtcgagggcagcctggcatcgagggg
ccgcccggctcacctggaccacggggcatgcaggggaacaggggagcaaccggagtcaga
gggacccagggtcccgcgggaaaagagccgagcgatcaacacatcaaacaagtttgcatg
cgagtcatgcaagaacagctggctcagttagctgctagtttaaggagacccgagtctggc
gtggctggtttacctggaaaacctggacttccaggacctccggggtcaccgggagacaat
ggcttccctgggcagtctggaataagaggactcccaggactcaaggggccgccaggagct
ttgggggtgaaaggacccaaaggtgaattgggagacagaggttccagagggcccactgca
cgaggacctaaaggtcagccaggagctcctggacttcctggtgagccgggcaaaccgggc
tacggtcaggacggtcgggacggacagaggggacccccaggtactcacgggctgccaggt
gtacccggtcctcccggatcagctggtcctaatggttactgcgacccgtcagcctgcaac
ctccaggcaggagccgcccaccagtctctggatgtgaagggacctgcagggaactag
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