Labrus mixtus (cuckoo wrasse): 132980712
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Entry
132980712 CDS
T10666
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmix04040
]
132980712 (trpc4b)
Ion channels [BR:
lmix04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132980712 (trpc4b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Dynamin-like_hel_bact
Motif
Other DBs
NCBI-GeneID:
132980712
NCBI-ProteinID:
XP_060902981
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All DBs
Position
9:23693256..23704450
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AA seq
918 aa
AA seq
DB search
MSQLYYRKADSSSYRDRIPLRIVRAESELSALERAYLGAVLKGDYASVKQALEEAEIYFR
ININCIDSLGRTALLISIDNENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PRGEKQVPPMLLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQRGVSIPQPHAVRCNCVE
CGSSSDVDGLRHSRSRLNIYKALASPSLIAVSSEDPFLTAFQLSWELIQLSTVENEFKAE
YEELSRICKQFAKDLLDQTRSSKELEIVLNYRDDINPLSDDSNNDLARLKLAIKYCQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAAKLITCIFIGLLFPLLSMVYLIIPTSRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHITYADSNFQGPAPTKVEWMILPWVLGFVWTEIKQ
MWDSGLEDYLDDWWNLMDFIMNSLYLATISLKIVAYVKFSGPKDRNSWDMWHPTLVAEAL
FAIANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETDEVGKCKGIRCSGQNNAFSTLFETLQSLFWSVFGLISLYVTNVEPDHQFTEFVGSTM
FGTYNVISLVVLLNMLIAMMNNSYQNIADHADIEWKFARTKLWMSYFEEGGTLPSPFNII
PSPKSVYYLVGWVKAHLFRGAHLIRLETFETLGRRAAVNVRLNHEYQEVLRNLVKRYVAS
RIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKPQGGVGGQVASSTLAYAGNSFKY
SPNVPTDEPQMKLSFFDVTTTVQENRAANITSPVGSKGQASGSVFLSRKREPYNELSKDV
SDAASEQSRLLSQKCDDINSIPDEETLLSDGQYQEQLQTEKVMVEVIKKVDEEKQDIHEI
GPPERAKEVKNGPKKYNN
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctttattacaggaaagctgacagctcctcatacagggaccgcatcccgctg
cggatagtgcgggcagagtccgagctctccgctctggagagggcctacctgggcgctgtt
ctaaaaggggactatgccagtgtgaaacaagctctggaggaggctgagatctacttcagg
atcaacatcaactgcattgactctctgggacggacagccctgctcatctcaattgacaac
gagaacttggagatcattgagctgctgctcagctttaatgtgtatgtgggtgatgccctg
ctacatgccatccgcaaagaagtggtgggggctgtggagctgctgctgaaccacaagaaa
ccacggggggaaaaacaggtcccccccatgctactggacaaacagttttcagacttcact
ccagacatcacacccatcatccttgcagcccacaccaacaactatgaaattatcaaactg
ctggtgcagcgaggtgtttccatacctcagccacatgctgtgcgctgtaactgcgtagag
tgcgggtccagttcagatgtggatggcctgcgtcactcacgctctcgacttaacatctac
aaggcccttgccagcccatcgctcatagctgtctccagtgaggatcctttcctcacggct
tttcaactcagctgggagctgatacagctcagcacagtggaaaatgagttcaaggcagag
tacgaggagctgtcccgtatttgtaaacaatttgctaaggacctcttagaccagacccga
agctccaaagagttggaaatagtcctcaactaccgagacgacatcaaccctctgtcggat
gacagcaataacgatctagctcgactgaagctggctatcaaatattgtcagaaagagttt
gttgctcagccaaactgtcagcagctcttggcgtcccggtggtatgatgaattcccgggt
tggaggagacgacactgggcagcaaagctcatcacatgtatcttcataggcctcctcttc
ccattattatccatggtttatctgatcattccgacaagccgctatggtttattcattcgc
aagcccttcatcaagttcatctgtcacactgcctcctacctgaccttcctcttcctgctc
ctcctggcctctcagcatataacctatgctgactccaactttcagggcccagcacccact
aaagtggaatggatgatcctgccttgggtgctaggttttgtatggactgagatcaaacag
atgtgggatagtggtttagaagactacctggatgactggtggaatttaatggacttcata
atgaactccctgtatcttgccaccatttctctgaagattgttgcttatgtaaagtttagt
gggccaaaagacagaaacagctgggacatgtggcacccaactttggtggccgaggcattg
tttgccatcgccaacatcttcagctcacttcgcctcatctgcctttttactgccaactct
catttgggccccttacagatctcactgggccgcatgctcctcgacatactcaagttcctc
ttcatctactgtctagtgttgttagcctttgccaatggcctcaaccagctctacttttat
tatgagacagatgaggtcggtaaatgcaagggtatccgctgcagtggacagaacaatgcc
ttttccacgctgttcgagacgctgcagtcattattttggtctgtatttggcctgatttcc
ctctatgtgaccaatgtggaaccagaccatcaattcactgagtttgttggcagtaccatg
tttggaacatacaatgtcatctcactggtagtacttctgaacatgcttattgcaatgatg
aacaactcctaccagaacattgctgaccacgcagatatagagtggaaatttgcaagaaca
aaattatggatgagctattttgaggaaggagggactttgccatctccatttaatataata
cccagtccaaagtcagtgtattatctagttggatgggtaaaggcacatttgtttagagga
gcccacttaatacggcttgaaacctttgaaacattagggagacgtgctgcagtaaatgta
agattaaaccatgagtatcaggaggttttgagaaaccttgtaaagcgttatgttgcttca
aggatcagagatgcaaagactgaggaagggttgacggaagagaattttaaggagcttaag
caggacatctccagcttccgctatgaagtccttggaatgatgaagggtaaaccacaaggg
ggggttggaggtcaagttgcaagctccaccttggcttacgctggaaactcctttaaatat
tctcccaacgtccctactgatgagcctcaaatgaagctgagcttctttgatgtgacgacc
actgtccaggagaacagagctgccaacatcaccagcccagtgggctccaaagggcaagcc
agtggttcagtttttctgtccaggaaaagagaaccgtataacgagctatccaaggatgtt
tcagatgctgcgtcagagcagagcagactcctctctcagaaatgtgatgacataaattcg
attccagatgaagagacactgttatctgacggacaataccaagaacaacttcagactgag
aaagtaatggttgaagtcataaagaaagtggatgaggaaaaacaggacattcatgagatt
ggacccccagagcgtgcaaaggaagtaaaaaatgggcccaaaaaatacaacaattaa
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