Labrus mixtus (cuckoo wrasse): 132991807
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Entry
132991807 CDS
T10666
Symbol
tnpo1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132991807 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132991807 (tnpo1)
03009 Ribosome biogenesis [BR:
lmix03009
]
132991807 (tnpo1)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132991807 (tnpo1)
Ribosome biogenesis [BR:
lmix03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
132991807 (tnpo1)
Pre-60S particles
132991807 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
Arm
TOR1L1_N
TPR_IPO5
Vac14_Fab1_bd
Cnd1
IBN_N
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_GCN1_C
Ltn1_1st
UNC45-central
Dopey_N
TPR_TTI1_C
INTS7_N
HEAT_DAAF5
VPS15-like_hel
RTP1_C1
DUF3689
Motif
Other DBs
NCBI-GeneID:
132991807
NCBI-ProteinID:
XP_060916690
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All DBs
Position
17:2308886..2344151
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AA seq
891 aa
AA seq
DB search
MECEWKPDEQGLQQILQLLKESQSPDTSTQRSVQQRLEQLNQFPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHYQNFPNGVSEFIKSECLQNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCQLLDSEDYNTCEGAFGALQKICEDSAEILDSDMLDRPLNIMIPKFL
QFFKHSSPKIRSHAIACVNQFIISRTQALMLHIDPFIENLFALATDEEPEVRKNVCRALV
MLLEVRLDRLLPHMHNIIEYMLQRTQDQDENVALEACEFWLTLAEQPVCKEVLSGHLSQL
TPVLVNGMKYSEIDIILLKGDIEEDEAIPDNEQDIRPRFHRSRTVAQQHEGDGIEDDDDD
DDELDDDDDTMSDWNLRKCSAAALDVLANVFRDDLLLHLLPLLKELLFHPEWVVKESGIL
VLGAIAEGCMQGMIPYLPELIPHLVQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLK
PLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAFILDTLVFAFSKYQHKNLL
ILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSVATALQS
GFLPYCEPVYQRCVNLVQKTLAQAMLHQSQPDQYEAPDKDFMIVALDLLSGLAEGLGGTI
EQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNP
ELISVCNNATWAIGEISIQMGPEMQPYIAMVLHQLVEIINRPNTPKTLLENTAITIGRLG
YVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCDAV
ASWVNPKDDLRDMFYKILHGFKNQVGEENWTRFSDQFPLPLKERLATFYGV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagtggaagccagacgagcagggacttcaacagattctgcagctgctgaag
gagtctcagtcgccggatacgtccacgcaaagatccgtgcagcaaagactggagcagctg
aaccagttcccagacttcaacaactacctgatatttgttttgacaaagttaaaatcagaa
gatgaaccgacgcggtccctgagcggattgatcctgaagaacaatgtgaaagcccactat
cagaacttccctaacggcgtgtctgagttcatcaagagcgagtgcctccaaaacatcgga
gactcgtcgcccctcatccgggccactgttggtatcctcatcaccaccatcgcctccaaa
ggagagctacagaactggcccgagctgctgcctaaactctgccagctgctggattctgag
gactacaacacgtgtgagggagcgtttggcgcccttcagaagatctgcgaggactccgct
gagatcctggacagcgacatgctggaccggccgctcaacatcatgatccccaagttctta
cagtttttcaaacacagcagtcctaagatcaggtctcatgccatcgcctgcgtcaatcag
ttcatcatcagcaggactcaggctctcatgctgcacatcgacccgttcatcgagaacctg
tttgcactggcgacagacgaggaacccgaggtgaggaagaacgtgtgcagagctctcgtc
atgctgctggaagtccgtctggaccgtctgctgccgcacatgcacaacatcatagagtac
atgctgcagaggactcaggaccaggatgaaaacgtcgccttagaggcctgcgagttctgg
ctcactctggcggagcaaccggtgtgtaaggaggtgctgagtggacacctttcacagctc
actccggtgctcgtcaacgggatgaagtactctgagattgacatcatcctgctcaaggga
gatatcgaggaagacgaagccattcccgacaacgagcaagacatccggccgcgcttccat
cgctcccgcacagtcgcccagcagcacgagggcgacgggatagaggacgacgacgacgac
gacgacgagctcgatgatgatgatgacactatgtcagactggaacctgcggaagtgttca
gctgcggcgttggacgtgttggcgaacgtgttcagggacgatctgttgctgcacctcctg
ccgctcctcaaagagctgctcttccatccggagtgggtcgtcaaagagtccggcatcctg
gtgctgggggccatagctgaaggctgcatgcagggtatgatcccgtacctgcccgagctc
atcccccacctcgtccagtgtttgtccgataagaaggctctggtgcgctccatcacctgc
tggactctgagccgctatgcacactgggtagtcagccagccgcctgacacctacctgaaa
cctctgatgacggagctgctcaaacgcatcctggacagcaacaagcgagtgcaggaggcc
gcttgcagtgcctttgccactttggaggaggaggcgtgcacagagctggtgccctacttg
gccttcatcctggacacgctcgtgttcgctttcagcaagtaccagcacaaaaacctgctc
atcctgtacgacgccataggaacgctcgcagactcagtgggtcaccatctcaataaaccg
gaatacatccagatgttgatgcccccgctgatccagaagtggaaccagctaaaagatgaa
gacaaagacctcttccctttattagaatgtctgtcgtctgtagccacggccctgcagagc
ggcttcctgccctactgtgagcccgtgtaccaacgctgtgtcaacctggtccagaagact
ctcgctcaagccatgcttcatcagtcccagccggaccagtacgaggcgccggacaaagac
ttcatgatcgtggctctggacctgctcagcggactcgcagagggtttagggggcaccatt
gagcagctggttgcccgtagcaacatcctcaccctcatgtaccagtgcatgcaggacaaa
atgccagaagtgcgtcagagttctttcgctctgctgggagatctaaccaaagcttgtttc
caacacgtcaaaccgtgcatcgctgatttcatgcccatactgggtacaaatttaaaccca
gaactgatatcagtgtgcaacaatgccacatgggccatcggagagatttctatacaaatg
gggcctgagatgcagccgtacatcgccatggtgctgcaccagctggtggagatcataaac
aggccaaataccccaaagactctcctggagaacacagcaataacaattggtcgtcttggt
tacgtttgtcctcaagaggtggcacccatgctacagcagtttataagaccctggtgcacc
tctctgcgaaacataagagacaacgaggagaaagactctgcgttcagaggaatttgcact
atgatcagtgtcaacccgggaggtgtagttcaggattttattttcttctgtgacgccgtg
gcctcctgggtgaatccaaaggatgatctcagagacatgttctacaagatccttcacggg
tttaagaaccaggtgggagaggagaactggacgcgtttctccgatcagttcccgctgccg
ctcaaagaacgactggccaccttttacggggtgtaa
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