Labrus mixtus (cuckoo wrasse): 132992839
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Entry
132992839 CDS
T10666
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
Transcription machinery [BR:
lmix03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132992839 (scaf8)
Spliceosome [BR:
lmix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132992839 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132992839
NCBI-ProteinID:
XP_060918349
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All DBs
Position
18:9982386..10014207
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AA seq
1458 aa
AA seq
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MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIIPTFQHLYRCPSDDKSKIVRVLNLWQKN
AVFKSDIIQPLLDMAAGILPPSVTPVMPSSAAPVNNTTPGTPPTPATPANIVQGLPDWAS
QITNTDTVAAVAQILQSPQGQQLQQLVQSLQLQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAATANSLNPLEQRVSSFNKKLLGPFDFGNDSERGEESKKDASSSQMPMVSEPINSSLF
HQLAEQLQQQNLEQFQKQLLEHQQHQQKALSLEGQDSIFGQENSVSSAQGSSQQQLSEQE
NKVDDSIDNQQQDMDLDEGPDGMEEEIFDADEKKIGSTRSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGSFKIG
SKIIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDGFAEGGIIDQETVNDEWE
AAKNAEPVKEVVSLPVSAETTAASNTQTETYNQQVTMMPVQLPVAQAVPSAVGLVPPNFS
VAMGIPPPGYGPPPPFIRAGFNTSQPPPGFMQAAQAGGMATAATSLVQPSVATSQESMKD
SPFGAMIPPTNTIPGGFMASAITGSVFNPLGVQTQQATNDKTVQSVDGMDAAAELTLQGM
QNAVRSGMGLLGMHPTSLTHPLHHSGLAGHRMPGLLPLDVRPNLLQPGAAARFPLLMQQG
QAQQAASLLESSLQAQARARAPFSQLDPFNRAPNLPNENVSKTEDESSGADEGKDQDYRF
PPMEKQSTGLLRTPPPEHREPLAGGGGGPGGGGGGRPPLLQTPGTQPARTSLVGRLQALA
GFTPDNRWSQTRGDFDERDSMRGGPQAPGGPKGFQEERPTPGQNFSNRFESRPGTAGGAA
VVPGNAGATGGPQAWNRGGAAAAAAAPFDNELHQDLDERRRPWDRQRDRDERDFDFRREM
NGNRHSRERERERERDRDRDRERARDRVREQERDRDRDKERDREREHERGGWTPLLPLPT
PLLPTPPLNPNLSLSQGKLLAPLKLNPQIQPRFQSPLLPQAQTKPSLLGLNQPLPQAQIK
SPPSQSQAAVAEPESETPALSETPPTQSPTPAQSPDLSSDSKGQSPETEAPIQAESSPPP
EIPPQSPTQPIPQSPSKTSNSPDSETPCQDSPLIEASSHDSPVAFTQAASPPEEMTHSLE
EQESPQKDEEESQDRPSSPQWVNGSGTDNSTVAELTPEASLEPSPEASPKPSPEPTQEPS
PGSVLPEREEEEEEEEEEEEQQQQQQQEEDEEDEELEDEEEEEEQLGSPEDLDNEQSEPM
EETASQPVVDTVTDTEGT
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaagcatttaacaacgagctgtactcgttgaatgagtacaagccaccc
atctccaaggccaagatgacacagatcaccaagtctggaatcaaggctataaaattttac
aagcacgttgtccagagcgtggagaagttcatacaaaagtgcaaaccagaatacaaggtc
ccagggctgtatgtcatcgactccatcgtcagacagtcgcgacaccagtttggaacagag
aaggatgtttttgctccgcgcttcagcaagaacatcattccaacgtttcagcacctctac
cggtgcccttcagatgacaagagcaagatagtgcgagttttgaacctgtggcaaaagaat
gcggtattcaaaagtgacatcatccagcctctgttggacatggctgcagggattctacct
cccagtgtcacacctgtcatgcccagcagtgctgctcctgtcaataacactacacctggc
acaccacctaccccggcaacccctgctaacatagtccagggtctgcctgattgggcttcc
cagattaccaacacagacactgttgctgcagtggcacagatcctacagagtccccaggga
caacagctgcagcagctggtacagagtctacagttgcagcagcagaagccccagccctcc
ctgctgcaggccttggatgctggcctggtggtgcagttgcaagctctgacagctcaactt
actgctgctgctactgcaaatagcctcaaccccctggagcagcgggtctcctcttttaat
aagaagctcctgggccctttcgattttggaaatgattctgaacgtggtgaagaatctaaa
aaggacgcatcctcatctcaaatgcccatggtgtcagagcccatcaacagctctctcttc
catcagctggcggaacagcttcaacagcagaatctggagcagtttcagaagcagctttta
gagcaccagcagcaccagcagaaggcattaagtttggaagggcaggactcaatctttggg
caagagaactctgtttcatctgctcagggtagcagtcagcagcagctttctgagcaagag
aacaaggtggatgactcgatagacaaccagcagcaggacatggatcttgatgagggccct
gatggtatggaggaagagatttttgatgcagatgagaagaagattggaagcacacgttcc
agaacacgctcaaggtcgcgctccaggtctcccaagaggagacggtccaggtcccgctct
ggctcacgcaaacgtaaacaccgcaagaggtcacgctcgcgctccagagaccgcaagaga
aagtcgtctcgttcttactcaagtgaaagacgtgctcgagagcgggagaaggagcggcag
aagaagggactgcctcccatcagatccaagactctaagcgtgtgcagcacaactctgtgg
gtgggccaggtggacaaaaaggccactcagcaggacctcaccaacttatttgaagagttt
ggtcagattgagtctatcaatatgatccctcctagaggctgtgcctacatctgtatggtc
cacagacaggatgcataccgtgcccgccagaagctcagcaccggctcctttaagattggc
tccaaaatcatcaaaattgcatgggctctgaacaagggggtaaagcaagagtacaagcag
ttttgggatgtagatcttggcgtcacctacataccgtgggagaaggtgaagctggatgac
cttgatggctttgctgaaggagggatcattgaccaggagacagttaatgatgaatgggaa
gcagcgaagaacgctgagccagttaaggaagttgttagtctgccagtaagcgctgagact
acggcagcatctaacacccagactgagacctacaaccagcaggtcaccatgatgcctgtg
cagctgccagtagcccaagctgttcccagtgctgtaggtttggtacctccgaacttttct
gtcgccatgggcatacctccgccaggctatgggcccccaccacccttcataagagccggc
tttaatacttcgcagcctccaccaggtttcatgcaggcagcacaggcaggaggaatggcc
acagcagctacttctcttgtgcagccctcagtggcaaccagccaagaatctatgaaggat
tcaccatttggcgctatgattcctccgaccaacactattcctggtggcttcatggcctca
gccatcactggaagtgttttcaacccattgggagtccaaactcagcaagccactaatgac
aagacagtccagtctgtagacggtatggatgctgctgcagagcttacactgcaaggcatg
cagaatgcagtccgaagtgggatgggtctccttggcatgcatcctacatccctcacacac
ccgctgcatcactctggtctggctggccataggatgcctggcctgctgcctcttgatgtg
cggcctaacctcctccaacctggggctgctgcccgcttcccgcttctaatgcagcaggga
caagcccagcaggccgctagcctcctcgagagttccctccaggcccaagcccgtgccagg
gctcctttctctcagctggacccattcaacagggcccccaatttacccaatgaaaatgta
tccaaaacagaagatgagtcatctggagctgatgagggcaaggaccaggactaccgcttc
cctccaatggagaaacagagcactggcctgctgaggacccctccacctgagcacagggag
cctcttgcaggtggtggtggaggaccaggaggtggtggaggaggcaggcctccattgctc
cagactccagggactcagcctgcaagaaccagcttagttggacgtcttcaagctcttgca
ggcttcacccctgataaccgctggagccagaccaggggagactttgatgaacgggatagt
atgcgaggggggccacaggccccaggtggcccaaagggcttccaggaagagcgtcccaca
ccggggcagaacttctccaaccgctttgagagccgtcctgggacagccggaggagcagct
gtggttccaggaaatgctggggctactggagggccacaggcctggaaccggggtggtgct
gctgctgctgctgcagcgccgttcgacaatgaattacatcaagacctagatgaacgaagg
cgcccatgggacaggcaaagagacagagatgagagagattttgacttcagaagggagatg
aatggaaaccgccacagccgagagagagaacgggagcgtgagagggacagagacagagac
agagagcgagcccgagatcgcgtcagagagcaggaacgtgacagagatcgtgacaaagaa
agagatcgtgagagagaacatgaacgagggggctggactcctctcctccctcttccaaca
cctctgctcccaactccacctctcaatcctaacttgtccctgagtcaaggcaaactgctt
gcacctcttaaattaaacccccagattcagcccagatttcagtccccacttctgcctcaa
gctcagacaaagccctctctcttaggcctaaatcagccactgcctcaggcccagattaag
tctcctccatcacagagccaagcagctgtggcagaaccagagtcggaaaccccagctctg
tctgagacgcctccaacacagtcaccaacccctgcccaatcacctgacctttcatcagac
agcaagggtcagagcccagagactgaggctcccatccaggctgagtcatctccgccaccc
gaaatccctccacaatccccaacccagcctatacctcagtccccttccaaaacctccaat
tctccagacagtgagaccccatgccaagactccccgctgattgaggcctcatcccacgac
tctcctgtggccttcactcaagctgccagcccccctgaagagatgacccactctctggag
gagcaggaaagcccacagaaggatgaggaggagtcacaagatagaccttcctcaccacag
tgggtcaatggatctggtacagacaatagcactgtggctgaacttacacctgaggcctcc
cttgagccctcacctgaggcatctcctaaaccctctcctgagcccactcaagaaccctct
cctggttctgtgctccctgaaagagaggaggaagaggaggaggaggaggaggaggaggag
cagcagcagcagcagcagcaggaggaggatgaggaggatgaggagctggaggatgaggag
gaggaggaggagcagcttggctctcctgaggacttagacaatgaacagagtgagcccatg
gaggaaactgcgagtcagcctgtggtagacactgtcacagacactgaggggacataa
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