Labrus mixtus (cuckoo wrasse): 132993610
Help
Entry
132993610 CDS
T10666
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04141
Protein processing in endoplasmic reticulum
lmix04210
Apoptosis
lmix04217
Necroptosis
lmix04218
Cellular senescence
lmix04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132993610
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
132993610
04217 Necroptosis
132993610
04218 Cellular senescence
132993610
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132993610
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmix01002
]
132993610
Enzymes [BR:
lmix01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
132993610
Peptidases and inhibitors [BR:
lmix01002
]
Cysteine peptidases
Family C2: calpain family
132993610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
132993610
NCBI-ProteinID:
XP_060919523
LinkDB
All DBs
Position
2:complement(35176995..35198404)
Genome browser
AA seq
701 aa
AA seq
DB search
MFGGVSGRIQKDRLKAEGLGSVQQAVQYLNQDYQAVKEDCLQNGTLFEDPMFPAEPSSLG
FKELGPFTAKTRGVEWKRPTELTDSPEFIVGGATRTDICQGALGDCWLLAAIGSLTLNDR
LLHRVVPHGQSFSREYAGIFHFQFWQFGEWVDVVIDDRLPVKDDELMFVHSAEGSEFWSA
LLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEMYELKKAPRDLHRIISKALERGSLLG
CSIDITSALDMEAVTFKKLVKGHAYSVTGLRQVDYRGRQERLIRIRNPWGQVEWTGAWSD
NSSEWSSIDSAEKDEMMCKMEDGEFWMSFQEFLRQFSRLEICNLTPDALSQDTSFWTTTT
YQGSWRRGSTAGGCRNHPNTFWINPQYKISLLEEDDDPEDDEAACSFLVALMQKDRRRFR
RHGQDVHTIGFAVYEIPEEYRGCPSVHLKKDFFLRHSSCARSETFINLREVSARLRLPPG
EYLIVPSTFEPSKEADFVLRVFTEKQSETEEMDDEVVANFEEEDDVSESDVDDSFRSMFA
QLSGDDMEISVRELRTILNRVVSKHRDLQTDGFSMESCRAMVCLMDKDGSARLGLLEFQV
LWNKIRKWLGIFRDFDLDKSGCMSSYEMRLALENGGFKLNNKLYQMLVARYADNEIIDFD
NFTCCLVKLEAMFKTFQDLDRDGTGKAEMNIVEWLCVTMCG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaggagtgtccgggcggatccagaaggaccggctgaaggccgaaggtctcggc
tcggtccagcaggctgtacagtacctgaaccaagactaccaggccgtgaaggaggactgt
ctgcagaatgggactcttttcgaggaccccatgttcccagcagaaccctcatctctgggc
ttcaaggaactcggaccgttcaccgccaaaaccagaggagtggagtggaagaggccgacg
gagctgacagacagccctgagttcatcgtgggcggagccaccaggacggacatctgtcag
ggagcgctgggagactgctggctgctcgctgctatcggctctctgactctgaacgatcgt
ctgctgcaccgcgttgttcctcacggtcagagcttcagccgggagtacgccgggatcttc
cacttccagttctggcagtttggtgagtgggtggacgtggtgatcgatgaccgtctgccc
gttaaagatgacgagctgatgttcgtccactctgctgaaggcagcgagttctggagcgcc
ctgctggagaaagcctacgccaagttgaacggctcgtacgaggcgctgtccggcggcagc
accacggaagggttcgaggatttcacgggcggcgtggccgagatgtacgagctgaagaaa
gctcccagagaccttcatcgaatcatcagcaaagctctggagagagggtcactgctgggc
tgctccatagacatcaccagtgccttagacatggaggcggtgaccttcaagaagctggtc
aaaggccacgcctactctgtgaccgggctcagacaggtggattatcgaggccgtcaggag
cgtctgatccggatcaggaacccgtggggtcaggtggagtggaccggagcgtggagcgac
aactcgtcagagtggagctccatcgactctgcagagaaagatgagatgatgtgcaagatg
gaggacggagagttctggatgtctttccaggagttcctccgccagttctccagactggag
atctgtaatctgaccccggacgccctcagtcaggacacctccttctggaccaccaccacg
taccagggcagctggaggagagggagcacagcggggggctgcaggaaccaccccaacacc
ttctggatcaaccctcagtataagatcagtctgctggaggaggacgatgaccccgaggac
gacgaggccgcctgcagcttcctggtggctctgatgcagaaagaccgccgccgcttccgc
cgccatgggcaggacgtgcacaccatcgggttcgccgtctacgagattccagaggagtac
cgcggctgtcccagcgtccacctgaagaaggacttcttcctgcgtcactcgtcgtgcgct
cgctcagagaccttcatcaacctgcgagaggtgagcgccaggctccgcctcccgcccggc
gagtacctgatcgtcccgtccacctttgagccctcgaaggaggccgacttcgtcctgagg
gtgttcacggagaaacagtcggagacggaggagatggacgatgaggtcgtggcaaacttt
gaagaagaggacgacgtgtcagagagcgacgtggacgactcgttcaggtccatgttcgct
cagctgtccggagacgacatggagatctcagtgagggagctcaggacgatcctgaacaga
gtcgtctctaaacaccgagacctgcagactgacggcttcagcatggagtcctgcagagcc
atggtgtgcctcatggacaaagacggcagcgctcggctcggtctgctggagtttcaggtt
ctctggaacaagatcaggaagtggctggggatcttcagagacttcgatctggataagtcc
ggctgcatgagctcctacgagatgcgcctggctttagaaaatggagggttcaaactgaac
aacaagctgtatcagatgctggttgctcgatacgccgacaacgagatcatcgacttcgac
aacttcacctgctgcctggtcaaactggaggccatgttcaagacgttccaggatctggac
cgagacgggacaggaaaagcggagatgaacatcgttgagtggctctgtgtgaccatgtgt
ggctga
DBGET
integrated database retrieval system