Leuconostoc mesenteroides KFRI-MG: LMES_1593
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Entry
LMES_1593 CDS
T02997
Name
(GenBank) DNA-directed RNA polymerase, beta subunit/140 kD subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lmk
Leuconostoc mesenteroides KFRI-MG
Pathway
lmk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMES_1593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmk03021
]
LMES_1593
03400 DNA repair and recombination proteins [BR:
lmk03400
]
LMES_1593
Enzymes [BR:
lmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMES_1593
Transcription machinery [BR:
lmk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMES_1593
DNA repair and recombination proteins [BR:
lmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMES_1593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Halo_prof
Motif
Other DBs
NCBI-ProteinID:
AHF19808
LinkDB
All DBs
Position
complement(1655292..1658900)
Genome browser
AA seq
1202 aa
AA seq
DB search
MVGHLVKYGKHRTRRSYASIKEVLDVPNLIEIQTASYQWFLNDGIKEMFGDIMPIDDFQG
TLSLEYVDYQLMEPKYNIDEAREHDANYSAPLHVTLRLTNHETGEIKSQDVFFGDFPLMT
EQGTFIINGAERVIVSQLVRSPGIYYNQTTDKNGRPHFGTTVIPNRGAWLEYETDAKGIA
NVRIDRTRKLLMTELVRALGFGSDSDIIDIFSDQYDALNMTLEKDVHKDMSDSRVEEALK
DVYERLRPGEPKTADSSRALLVARFFDPKRYDLASVGRYKINKKLSLKTRLLNQTLAETL
ADPDSGEIIAEKGTLVDKEVISKLTPYLDREDFKTTTYTPSGDAVLEEPVTLQKIKIESP
ENPEKTLLLIGNGHIDEDDRTVRPADILAGMNYFLNLQEGVGHVDDIDHLGNRRIRSVGE
LLQNQFRIGLTRMERVVRERMSIQDANTVTPQQLINIRPVVAAVKEFFGSSQLSQFMDQT
NPLGEMNHKRRLSALGPGGLTRDRAGVEVRDVHYTHYGRIDPIETPEGPNIGLINSLATY
GRINKYGFVETPYRRVDWTTHKVTDKIDYLTADEEDNYIVAQANSPLNEDGSFVHNTVMA
RFGEENIETPIDRIDYMDVSPKQVVSVGTAAIPFLENDDSNRALMGANMQRQAVPLLDPH
SPLVGTGIEYKAAHDSGVAMIARASGEVEYVDGRQIRVRREDGQLDTYELMKFRRSNGGK
NYNQKPIVHVGEHIEADEVLADGPSMEQGELALGQNPLIAFMTWQGYNFEDAIVLNERLV
REDVYTSIHIEEYDSEARDTKLGPEEMTREIPNTGEDQLKDLDADGIIRVGAEVHDGDIL
VGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGVVQNVRIYTPENGDELA
PGVNMMVRVYIAQKRKIQVGDKMAGRHGNKGTVSVVVPEEDMPYMPDGTPIDILLSPMGV
PSRMNIGQVLELHLGFAAKKLGIHVASPVFDGASDDEIEMALREAGLPQDGKSVVYDGRT
GEAFDKRVGVGVMHYMKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAYTLQEILTYKSDDVAGRVKVYESIIKGEPIPRPGVPESFRVLVKELQALGLDM
QVLDGAGDEVELRQMDEDDSILPVDALEKLARTNPDLLNKDDEEVAAAFSKVEEQSQTFE
EK
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtggtaggacatttagtaaaatacggtaagcaccgtactcgtcgttcatatgctagcatc
aaagaagtacttgatgtgccgaatttgattgaaattcaaacggcatcatatcaatggttt
ttgaacgatggtattaaggaaatgtttggcgacatcatgccaatcgatgatttccaaggt
actttatctttggaatacgttgattatcaattaatggaaccaaaatataatattgacgaa
gcacgtgaacatgatgcaaactattctgcaccactacacgttacattgcgtttaacgaac
cacgaaactggtgaaattaagtcgcaagatgtattctttggtgattttccattaatgaca
gagcaaggaacgttcattattaatggagcagagcgtgttattgtttcacagcttgttcgt
tcacccggtatttattataatcagacaactgataaaaacggacgtccgcattttggaacg
actgttattcctaaccgtggcgcatggttggagtatgaaactgatgccaagggcattgct
aacgtccgcattgatcgcacgcgtaagttgctaatgactgaattagtacgtgcacttgga
tttggttcggattcagacattattgatattttttcagatcaatatgatgcattgaacatg
actcttgaaaaagatgtccataaggatatgtcagattctcgtgttgaagaagcattgaag
gatgtatacgaacgtttgcgtccaggtgaaccaaagacagctgattcatcacgtgcacta
ttagttgctcgtttctttgatccaaagcgctatgatttagcttctgtgggccgttataag
attaataaaaagctgtcacttaagacacgtttgttaaaccaaacactagcagaaacattg
gctgaccctgattctggtgaaattattgctgaaaaaggtacgttagttgataaggaagtt
atttctaaattaacaccatatttggatcgtgaagactttaagacaacaacatatactcca
tcaggtgatgctgttcttgaagaacctgtaacccttcaaaaaatcaaaatcgaatctccc
gaaaacccagaaaagacattattgttgattggcaatgggcacattgatgaagatgatcgt
acagtacgtccagctgatatcttggcaggtatgaactacttcttgaacttgcaagaaggt
gttggtcatgttgatgatattgaccacttgggtaaccgtcgtattcgttctgttggtgaa
ttgttgcaaaaccaattccgtattggcttaacgcgtatggaacgtgttgttcgtgaacgc
atgtcaattcaagatgccaacacggttacaccacaacagttaatcaatatacgtcctgtt
gtagccgctgtcaaagaattctttggttcttcacaattgtcgcagtttatggatcaaact
aacccattgggtgaaatgaaccacaaacgtcgtttgtcagctcttggaccgggtggtttg
actcgtgatcgtgccggcgttgaagttcgagatgttcactatacacattacggtcgtatt
gatccgattgaaacaccagaaggtcctaacattgggttgattaactcgttggccacttat
ggtcgcattaacaaatatggtttcgttgaaacaccataccgtcgtgttgattggacaact
cataaggttacagataagattgattatttgacagccgatgaagaagataactatattgtt
gctcaagctaactcaccattaaatgaagatggtagctttgtccacaacacagttatggct
cgttttggtgaagaaaacattgaaacaccaattgatcgtattgactacatggacgtttcg
ccaaagcaggttgtttctgttggaacagctgctattccgttcttggaaaacgatgattcc
aaccgtgctttgatgggtgccaatatgcaacgtcaggcagtgcctttgcttgatccacat
tcaccattagtaggaacaggaattgagtataaagcagctcatgattctggtgttgcgatg
attgcacgcgcatctggtgaagttgagtatgtggacggtcgccaaatccgagttcgtcgt
gaagatggtcaattggatacttatgaattgatgaaattccgtcgttcaaacggtggtaaa
aactataaccaaaagccaattgtacatgtcggtgagcatattgaagccgacgaggttttg
gcagatggtccttcaatggaacaaggtgaattggccttggggcaaaatcccttaattgct
ttcatgacttggcaaggatataacttcgaagatgccattgtcttaaatgaacgtttggtc
cgtgaagatgtttatacttcaattcacatcgaagaatacgattcagaagcgcgagacaca
aaactcggaccggaagaaatgactcgtgaaattcctaacactggtgaagatcagttaaag
gatttggatgcggacggtattattcgtgtcggtgctgaagtgcacgatggtgatatctta
gttggtaaggtaacacctaagggtgttactgaactttctgctgaagaacgtttattgcat
gccatttttggcgaaaaagcgcgtgaagtacgtgatacatcattacgtgttcctcatggt
ggcggcggtgtcgttcaaaacgttcgtatttatacacctgaaaatggtgatgaattagca
ccaggtgtcaacatgatggttcgtgtttatattgcacaaaagcgtaaaattcaagtcggt
gataagatggctggtcgtcatggaaacaagggaactgtctctgttgttgtgccagaagaa
gatatgccatatatgcctgatggaacacctattgacattctattgtcacccatgggtgtg
ccatcacgtatgaatattgggcaagtacttgaattgcacttgggatttgctgccaagaaa
cttggtattcatgttgcttcacctgtctttgatggtgccagtgatgatgaaattgaaatg
gccttacgtgaggctgggttaccacaagacggtaagtcagttgtctatgatggtcgcact
ggtgaagcttttgacaagcgtgttggtgttggtgtcatgcattatatgaaactagcgcac
atggttgacgataaaattcatgcacgttcaattggtccttactcacttgttacacaacag
cctttgggtggtaaagctcagtttggtggacagcgtttcggtgaaatggaagtttgggct
ttggaagcttatggtgcagcttacacattgcaagaaatcttgacgtataagtcagatgat
gttgcaggccgtgttaaagtgtatgaatcaattattaagggtgaaccaattcctcgtcct
ggtgtaccagagtctttccgtgttttggttaaagaattgcaggcacttggcttggacatg
caagtactagatggtgcaggtgatgaagttgagttgcgtcaaatggatgaagatgattca
attttgcctgttgatgcacttgaaaagctagcccgtacaaatcctgatctgttaaacaaa
gatgatgaagaagttgctgcagccttctctaaggttgaagaacaaagtcaaacatttgag
gaaaaataa
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integrated database retrieval system
