Listeria monocytogenes M7 (serotype 4a): LMM7_1327
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Entry
LMM7_1327 CDS
T01988
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lmq
Listeria monocytogenes M7 (serotype 4a)
Pathway
lmq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMM7_1327 (dbpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmq03019
]
LMM7_1327 (dbpA)
03009 Ribosome biogenesis [BR:
lmq03009
]
LMM7_1327 (dbpA)
Enzymes [BR:
lmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMM7_1327 (dbpA)
Messenger RNA biogenesis [BR:
lmq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMM7_1327 (dbpA)
Ribosome biogenesis [BR:
lmq03009
]
Prokaryotic type
rRNA helicases
LMM7_1327 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEH92332
UniProt:
A0A0E0UV63
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All DBs
Position
1281138..1282550
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AA seq
470 aa
AA seq
DB search
MHNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQ
VEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIYGQSPFAKQKLELSQKNHI
VVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFIDQVEDILSRLPKQRQNLFFSA
TMPEEMQDLIKRYQDDPMVIEMASEKTNPIFHVEMQTDNKEKTLKDVLITENPDSAIIFC
NTKNQVDELTDLLDVKASKIHGGLRQEDRFRAMDDFKSGKSRFLIATDVAGRGIDVDNVS
LVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRDIEEMLDVTIEKKRKPT
VIEVKANEDAFRKKQQKRPTIKKARGEKLNKNIMKLYFNGGKKKKIRAVDFVGTISKLEG
ITAEDIGIITIEDHVSFVEILNGKGPAVLDMMRSRKVKGRRLKVNEARKR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcataatttaaaattaagtgaagaaattaaaagagcaattaacgaactaggatataca
gaagcaacgcctgttcaaaaagcagtaattccagttgccttaacaggggaagatatcgtt
gctaaatcacaaactggtagtgggaaaacagcagcattcgctattcctattgctgaacaa
gtcgaatgggaagaaaataaaccgcaagcgctaatcatcgttccaacgcgagaacttgca
atgcaagtcaaaacagaatgtacgaatatcgggcgatttaaacgcgtcaaagctgcagca
atatacggacaatcaccatttgcaaaacaaaaattagaactaagccaaaaaaatcatatc
gtcgttgggacgcctggtcgcctactggatcatattgaaaaaggatctctgaatgtcgat
aaagtagcccacttagttttagatgaagtagacgaaatgttaagtatgggctttattgat
caagtagaagatattcttagccgtttaccaaaacagcgccaaaatctatttttctctgca
actatgccagaagaaatgcaagatttaatcaaacgctatcaagacgatccaatggttatc
gaaatggcatcagaaaaaacaaatcctatcttccatgtggagatgcaaacagataataaa
gaaaaaacgctaaaagatgttttaattacggaaaatccagatagcgcgattattttttgc
aacacgaaaaatcaagtcgatgaactcacggatttacttgatgtaaaagctagtaaaatt
catggtggcttaagacaagaagatcgttttcgggcaatggatgatttcaaaagtggcaaa
tcgcgtttcttaattgcgacagatgtggcagggcgtggaattgatgtggataatgtctca
ttagttattaactatgatttaccaatcgaaaaagaaaactatgtgcatcgtatcggtcgt
actggtcgcgctggcaaaagcgggaaagccattagcttcgtgaaaactaatgaaaatcca
cttttgcgtgatatagaagaaatgctcgacgttacaattgaaaaaaaacgtaaaccgaca
gtaatcgaagtgaaagcaaacgaagatgctttccgcaaaaaacaacaaaagcgaccaact
atcaaaaaagctcgtggcgaaaaattaaataaaaacatcatgaaattgtactttaatggt
gggaaaaagaaaaaaattcgtgcagtagattttgtgggaactatttctaagttagaagga
attacggctgaagatattgggattattacgattgaagaccatgtttcttttgtcgaaatt
ttaaatggaaaagggcccgctgtactggacatgatgcgctctcgtaaagtaaaaggtaga
cgcctgaaagtaaacgaagccagaaaacgataa
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