Listeria monocytogenes R479a (serotype 1/2a): LMR479A_1356
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Entry
LMR479A_1356 CDS
T03180
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Pathway
lmr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMR479A_1356 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmr03032
]
LMR479A_1356 (rnhB)
Enzymes [BR:
lmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
LMR479A_1356 (rnhB)
DNA replication proteins [BR:
lmr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
LMR479A_1356 (rnhB)
Elongation factors (archaeal)
LMR479A_1356 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
CDM16578
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All DBs
Position
1304539..1305324
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AA seq
261 aa
AA seq
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MSDSISVIKEKLSEVTSENDPFFQKCIQDERKGVEKLVQSVRRKWEKEAKLLVKLKEMTQ
YETDLFQQGYKYIAGVDEVGRGPLAGPVVAAAVILPADFSVVGINDSKQLSEAKRDALFE
KIKKEAIAIGVGIIEHDVIDQVNIYEATKLAMCEALNQLTPEPDFVLIDAMPLRYTEAEL
SLIKGDTKSISIAAASIIAKVTRDRLMQMYDEKYPGYDFANNMGYGTKKHLLGLDTIGIC
PIHRMSFSPVKESKLHFDSLN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccatatccgttataaaagaaaaattaagcgaagtcacttcagaaaatgat
ccttttttccaaaaatgtatacaggatgaacgtaaaggtgtagaaaaacttgtgcaatcc
gtgagacgaaaatgggaaaaggaagcaaaattacttgtgaaacttaaagaaatgacacaa
tatgaaactgatttatttcaacaaggatacaaatatattgctggagtagatgaagttggc
cgtggcccgcttgctggtccagttgttgctgccgcagtcatcctgccagctgatttttct
gttgttggaataaacgattctaagcaattgagtgaagcaaaacgtgacgcattgttcgaa
aagataaaaaaagaagcaattgctatcggagtagggattattgaacatgatgtaattgat
caagtaaatatttatgaagcgacgaaacttgctatgtgtgaagcgttaaatcaattaaca
ccagaacctgattttgttctaatagatgcaatgccactaagatataccgaggcagaacta
tctcttatcaaaggggatacaaaaagcatttcgattgctgcagcgtctatcatcgcaaag
gttacaagagataggttaatgcagatgtacgatgaaaagtatcctggctatgattttgca
aacaatatgggctatggcacaaaaaaacatttacttggtttagatacaattggtatatgt
cctattcatcgcatgagtttttcgccagtgaaagaatcaaagttacattttgacagctta
aattaa
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