Listeria monocytogenes R479a (serotype 1/2a): LMR479A_2320
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Entry
LMR479A_2320 CDS
T03180
Symbol
clpB
Name
(GenBank) ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lmr03110
]
LMR479A_2320 (clpB)
Chaperones and folding catalysts [BR:
lmr03110
]
Heat shock proteins
HSP100
LMR479A_2320 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
nSTAND3
IstB_IS21
AAA_14
TniB
ATPase_2
AAA_7
Roc
AAA_28
NBD_SMAX1
Zeta_toxin
bpMoxR
NACHT
DUF815
Torsin
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CDM17536
LinkDB
All DBs
Position
complement(2300445..2303045)
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AA seq
866 aa
AA seq
DB search
MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESDFAKRVYDVAEVDTDALQ
KVIENTLEKIPVVTGSGVNYGQAMSQALFQLMKDAEKEQQQLEDDFVSTEHLILAVMNQK
SNPITAELKNQHKAKKQIKEAILKIRGGKRVTSQNAEENYEALTKYGRDLVAEVRSGKLD
PVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKTII
SLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAMDAGNM
LKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGLKERFE
IHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELDEVTRK
VMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIREVREQ
IDHLRHELEEAENNYDLNKAAELRHGRIPAVEKELLELEAENREKTAQEDRILQEEVTEN
EIAEIVGRWTGIPVTKLVEGEREKLLKLADVLHQKVIGQDDAVQLVSDAVLRARAGIKDP
KRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYI
GYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVI
IMTSNIGSNLLLERTEEGEISPELESDVMQILQSEFKPEFLNRVDDIILFKPLTLADIKG
IVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVETPLAREI
VSGKIMPHSSVEIDLADKEFTFKVTE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaaaaattcacacaacaagtccagcaaacaattgcggacgcacaaaatcta
gctattgcatcagaacatcaagaaattgacgttgcacacgtttttaaagtgttattaaca
gaaagcgactttgcaaagcgagtctatgatgtagcggaagttgatacagatgcacttcaa
aaagtaatagagaatactttggaaaaaatcccagtagttacaggaagtggcgtgaattat
ggccaagcaatgagccaagctcttttccaactaatgaaggatgcagaaaaagaacaacaa
caattagaagatgattttgtctcaacagaacatcttatcttagctgttatgaatcaaaaa
tcgaatccaattacagccgaacttaaaaatcaacataaagctaaaaaacaaattaaagaa
gcaattttaaaaatcagaggagggaaaagagtgacttctcaaaatgcagaagaaaactat
gaagctttaacaaaatatggtcgtgatttagtcgcggaagttagaagcggcaaactcgat
ccagtaatcggacgcgatgcagaaattcgtaacgttatccgaattttatctagaaaaaca
aaaaacaatccagttctaataggtgaaccaggtgttggtaaaacagccattgtcgaagga
ttagcgcaacgtatcgttcgaaaagacgtgccagaaggactgaaagataaaacgattatc
tcactcgacattggttcccttattgctggagctaagtaccgcggtgaatttgaagaacga
ttgaaagcagtactccaagaagtaaaacaaagtgatggtcaaattttactctttattgat
gaaattcatacgattgtcggcgcaggtaaaacagacggcgcaatggacgctggaaatatg
ttaaaaccgatgcttgcccgcggagaactgcactgtatcggtgcaactacattggatgaa
tatcgccaatatatcgaaaaagatgctgcactagaaagacgtttccaaaaagtgcttgtc
ccagaaccaacagtggaagatacggtttccattttacgcgggttaaaagaacgttttgaa
attcatcacggggtaaatattcatgacaatgctttagttgcagctgcgagtctttctaat
cgttatattactgaccgcttcttgccggacaaagcaattgacttagtagatgaagcatgc
gcaactattcgtgtcgaaattgactccatgccaagtgaactcgatgaagtaactagaaaa
gtaatgcaattagaaattgaggaagcagcactaaaagaagaaaaagatccagcgagtgaa
cgccgtttagaaatattgcaacgcgagctggctgactacaaagaagaagccaaccaaatg
aagtccaaatgggaatccgagaaaaacgaaatcagtaaaattcgtgaggtccgggagcaa
atcgaccatttacgccatgaattagaagaagcagaaaataattatgatttaaacaaagca
gcagaattacgccacggtagaatcccggctgtggaaaaagaattgcttgagttagaagca
gaaaatcgcgaaaaaacagcacaagaagatcggattttacaagaagaagtaacagaaaat
gaaattgcagaaatcgtcggacgttggacagggattccggtgactaaattagtagaagga
gaacgcgaaaaactgcttaaattagcagatgtccttcatcaaaaagtaattggtcaagat
gatgccgtccaattagtgagtgatgctgtcttacgagctcgtgcaggaattaaagatccg
aaacgcccaataggctcctttattttcttaggaccaacaggtgtgggtaaaacagaactt
gctaaagcacttgcatttaatatgtttgattccgaagatcacatgattcgaattgatatg
tctgaatacatggagaaacattccgtatcaagacttgtcggagctcctccaggttacatt
ggttatgaggaaggtggtcaacttactgaagctgtaagacgaaacccttattcgatcgtc
ctacttgatgaaatcgaaaaagctcatccagatgtatttaacatactattacaagtactt
gacgatggacgtatcacagattcacaaggtcgattaattgattttaaaaatacagtaatt
attatgacgtcaaatattggctctaatttattacttgaaagaaccgaagaaggcgaaatt
tcaccggaattagaatcagatgtaatgcaaattttacaaagtgaatttaaaccagaattc
ttaaaccgcgtagatgatattattctatttaaaccactaacacttgctgatattaaaggt
attgtggagaaattagtagaagaacttcaaatccgtttagccgaccaagaaattacaatc
actatttccgatgatgcaaaagcctttattgcggaggaagcttatgatccggtatacgga
gcacgaccacttaaacgctatattgtgcgtcatgtcgaaacaccacttgcaagagaaatt
gtctctggtaaaatcatgccacattcatccgtggaaattgatttagcagataaagaattt
acttttaaagtcacagaataa
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