Listeria monocytogenes Finland 1998: LMLG_2973
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Entry
LMLG_2973 CDS
T01986
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lms
Listeria monocytogenes Finland 1998
Pathway
lms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMLG_2973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lms03019
]
LMLG_2973
03016 Transfer RNA biogenesis [BR:
lms03016
]
LMLG_2973
Enzymes [BR:
lms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LMLG_2973
Messenger RNA biogenesis [BR:
lms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LMLG_2973
Transfer RNA biogenesis [BR:
lms03016
]
Prokaryotic type
tRNA degradation factors
LMLG_2973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
RNase_II_C_S1
S1_2
CvfB_2nd
SPATA25
RICTOR_M
DUF1773
Motif
Other DBs
NCBI-ProteinID:
AEO38860
LinkDB
All DBs
Position
1339478..1341649
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AA seq
723 aa
AA seq
DB search
MSEKQVFSTEWAGKTLSVEVGQLAKQASGAALIRYGDTVVLTAAVGSKKPRPGDFFPLTV
NYEEKMYSVGKVPGGFLKREGRPSDRATLTARLIDRPIRPLFAEGFRNEVQITSTVFSVD
QDCSPEMAAMLGSSVALVISDIPFEGPIAGVDVGRIDGKYVINPTIEQAEKSDISLTVAG
TYDAINMVEAGAKEVSEEAMLEAIMFGHEEIKRLCEFQQQIIAAVGKEKREIELFVSDPE
LEAEVKAASEGKMKTAIKTEEKKAREAAIEEVKEEILESYKAKELENESEILSEVAHILE
MIEKDEMRRLISQDKIRPDGRKVNEIRPLSSEVGMLPRVHGSGLFTRGQTQALSVCTLAP
LREHQIIDGLGTEEYKRFMHHYNFPQFSVGETGPRRAPGRREIGHGALGERALQYVIPSE
EEFPYTIRLVSEVLESNGSSSQASICGSTLAMLDAGVPIKAPVAGIAMGLVKLGDDYTIL
SDIQGMEDHFGDMDFKVAGTKDGITALQMDIKIDGLSRQILDEALTQAKEGRLHILEHLT
STISAPREELSAYAPKIITLNIKPEKIKDVIGPGGKQINAIIDETGVKIDIEQDGTVYIA
SQDQAMNRKAIAIIEDIVREVEVGEVYTGKVRRIEKFGAFVELFKGTDGLVHISELAHER
VGKVEDILKLGDEVTVKVIEVDQQGRVNLSRKALLEKKEQPEGDKKPQAEKKFYPKTKKP
ESK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaacaagtattttcaacagagtgggcaggtaaaacattatctgttgaagta
ggtcaattagcaaaacaagcaagtggggcagccttaattcgttacggtgatacggttgtt
ttaacagccgcagtaggttctaaaaaaccacgtccaggcgactttttcccattaactgtt
aactatgaagaaaaaatgtattccgttggtaaagttcccggtggattcttaaaacgtgaa
ggacgtccaagtgaccgtgcgacattaacagcgcgtctaattgaccgaccaatccgtcca
ttatttgcagaaggtttccgtaatgaagttcaaattacatctactgttttcagtgtggat
caagattgttcgccagaaatggcagcaatgcttggatcttctgttgcattagttatttcc
gatattccatttgaaggaccaatcgctggtgttgacgttggtcgtatcgatggaaaatac
gttattaacccaacaatcgagcaagcagaaaaaagcgatattagcttaactgttgcagga
acttatgatgcaatcaacatggtagaggctggagcgaaagaagtttcagaagaagcaatg
cttgaagcaattatgtttggtcatgaagaaattaaacgtctttgtgaattccaacaacaa
attattgcggcagttggtaaagaaaaacgcgaaatcgaactttttgtaagcgatcctgaa
cttgaagcagaagtaaaagcagctagtgaaggtaaaatgaaaacagctatcaaaacagaa
gagaaaaaagcacgtgaagctgcaattgaagaagtaaaagaagaaattttagaaagctat
aaagcaaaagaattagaaaatgaatctgaaattcttagcgaagtagctcatattcttgaa
atgattgaaaaagatgaaatgcgtcgtctaatttctcaagataaaatccgtccagatggt
cgtaaagtaaacgaaattcgcccgctttcttctgaagttggcatgcttccacgtgtccat
ggttctggtttattcactcgtggccaaacacaagctctaagcgtgtgtacactggcaccg
cttcgtgaacaccaaattattgatggtctaggaacagaagagtacaaacgctttatgcac
cattataatttcccgcaatttagtgttggggaaactggccctcgtcgtgctccagggcgt
cgtgaaatcggtcacggtgcattaggcgaacgtgcattgcaatatgttattccttccgaa
gaggaattcccatacacaatccgtttagtatcagaagttcttgaatctaacggatctagc
tctcaagcaagtatttgtggttctacacttgcaatgcttgacgctggtgttccaattaaa
gcgccagttgcaggtatcgcgatgggtcttgtaaaacttggcgatgactacacaatcctt
tctgatatccaaggtatggaagatcactttggcgatatggactttaaagttgctgggaca
aaagacggtattacagcacttcaaatggacatcaaaatcgatggcttgagccgtcaaatt
ttggacgaagcattaacacaagcaaaagaaggacgcttacacattctagaacacttaact
agcacaattagcgcacctcgtgaagaactttctgcttatgctccaaaaatcatcacacta
aatatcaaaccagagaaaatcaaagatgttatcggacctggtggaaaacaaatcaatgca
attattgatgaaactggcgtaaaaattgatatcgaacaagatggtacagtgtacattgct
tcccaagatcaagcgatgaaccgtaaagcaattgctatcattgaagacatcgttcgtgaa
gtagaagtgggagaagtttacactggtaaagttcgtcgtatcgaaaaatttggcgcattt
gttgaattattcaaaggtacagacggtctagttcatatttctgaattagcgcatgaacgc
gttgggaaagtagaagatatcctaaaattaggtgatgaagttactgttaaagttatcgaa
gtagaccaacaaggccgcgttaacttatcacgtaaagctttgcttgagaaaaaagaacaa
ccagaaggcgataaaaaaccacaagcagagaaaaaattctatcctaaaacgaaaaaacca
gaatctaaataa
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