Limosilactobacillus mucosae: LBLM1_01480
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Entry
LBLM1_01480 CDS
T03814
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lmu
Limosilactobacillus mucosae
Pathway
lmu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBLM1_01480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmu03021
]
LBLM1_01480
03400 DNA repair and recombination proteins [BR:
lmu03400
]
LBLM1_01480
Enzymes [BR:
lmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBLM1_01480
Transcription machinery [BR:
lmu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBLM1_01480
DNA repair and recombination proteins [BR:
lmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBLM1_01480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AJT49892
UniProt:
A0A0D4CIA6
LinkDB
All DBs
Position
307243..310803
Genome browser
AA seq
1186 aa
AA seq
DB search
MNSLAGHLVKYGKHRTRRSYSRIKEVLDLPNLIEIQTDSYNWFMEKGLREMFNDIMPIDD
FQGKLSLEFVDYQLLEPKYTVDEAREHDANYSAPLHVTLRLTNHETGEIKSQDVFFGDFP
LMTDQGTFIINGAERVIVSQLVRSPGVYYNEEDDKNGRPSYGATFIPNRGAWLEYETDAK
GISYVRVDRTRKLPLTEMVRALGFGSDDEIIDMLGGNSEGLFATIDKDVHKNPEDSRVEE
ALKDIYERLRPGEPKTADSARNLLTARFFDPKRYDMAPVGRYKTNKKLMMKYRLLGQTLA
ETLADPETGEILANKGDVVTKEVLKTLEPALDNDDFKMVTYTPSDEAVVTAPVKLQKILV
YSKNDPDRVVPIVANGHIPLELKHIQPADIIASINYFFNLQEGIGTTDDIDHLGNRRIRS
VGELLQNQFRIGLARMERVVRERMSIQDINTVTPQQLINIRPVVASIKEFFGSSQLSQFM
DQTNPLGELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINSL
SSYARINEYGFIETPYHRVSWDTHKVTDKIDYLTADEEDNYIIAQANTKLNDDGSFADEE
IMCRHKDDYVETTPENVDYMDISPKQVVSVASACIPFLENDDSNRALMGANMQRQAVPLI
NPHAPLIGTGIEYKAAHDSGVALVAKKAGTVEYVDAREIRVREEDGTLDTYKLMKFRRSN
GGKNYNQRPIVKVGEHIDADDVLADGPSMEQGELALGQNPLIAFMTWQGYNFEDAIAINE
RLIKEDVYTSIHIESYESEARETKLGPEEMTSEIPNVGADALKNLDETGVIRVGAEVNDG
DILVGKVTPKGMTELSAEERLLHAIFGEKSREVRDTSLRVPHGGGGIVQDVKVFTRENGD
ELAPGVNKMVRVYIAQKRKIQVGDKMAGRHGNKGTVSIVVPEEDMPYMPDGTPIDIMLSP
MGVPSRMNIGQVIELHLGMAARKLGIHIATPVFDGATDEDVWEAVKEAGLPSDGKTILYD
GRTGEPFEQRVSVGVMHYLKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTYKSDDVVGRVNTYEAIINGDPIPKPGVPESFRVLVKELQSLG
LDMKVLDSQNEEVQLKNMDEGVADIRKLARDGSDKHEEVKDEAKQD
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagtttggccggacatttagtaaaatacggtaagcaccgtacgcgtcgcagttac
tcccgtatcaaggaagtactggacctgcctaacttgattgaaatccagaccgattcctat
aactggtttatggaaaaaggtctgcgggaaatgtttaacgacatcatgccaatcgatgac
ttccaaggcaaactgtcgctggaattcgtcgactaccaactgcttgaacctaagtatacg
gttgatgaagcccgggaacacgatgcaaactactctgcaccgctgcacgttaccctgcgc
ttgacgaaccacgaaactggcgaaatcaagtcccaagacgtgttcttcggcgacttccca
ctgatgacggaccaaggtacctttattatcaatggtgcggaacgagtaatcgtttctcaa
ctggttcgttcacctggcgtttactacaatgaagaagatgacaaaaatggccggccaagc
tatggtgctacttttattccaaaccgtggtgcctggctggaatacgaaaccgatgcgaag
ggcatctcttacgtacgggttgaccggacacggaagctgcctttgactgaaatggtgcgt
gcgctgggctttggctctgacgatgagatcattgacatgctgggtggcaacagtgaaggc
ctgtttgctacgattgataaagacgtgcacaagaaccctgaagactcacgagttgaagaa
gccttaaaggacatctacgaacgcttgcgtccaggtgagcctaagacggctgactcagca
cggaatctgctgacggctcgcttctttgatccaaagcgctacgatatggcaccagttggc
cgttacaagaccaacaagaaactgatgatgaagtatcggttgttgggtcaaacgctggcc
gaaacgctggctgatccggaaactggtgaaatcctggccaacaagggtgatgtagttacc
aaagaagtattgaagactttggaaccggccctggacaacgatgacttcaagatggttacc
tacacgccatctgatgaagctgttgttacggcaccggttaagctgcaaaagatcctggtt
tactccaagaacgatcctgaccgcgttgtgcctatcgtagccaacggtcacattcctttg
gagcttaagcacattcagccagccgacatcattgcgtccatcaactacttcttcaacctg
caagaaggcattggcacaactgacgacatcgaccacttgggtaaccggcggattcgttcc
gtaggtgagctgctgcagaaccagttccggatcggcttggctcggatggaacgtgtggtt
cgtgaacggatgtcgattcaagacattaacacggttacgccacagcagctgatcaacatt
cgaccagtagttgcctcaattaaggaattctttggttcttcacagctttctcagttcatg
gaccaaaccaacccactgggcgaactttcccacaagcggcgtctgtctgcccttggtcct
ggtggtttgactcgtgaccgggccggctatgaagttcgtgacgttcactatactcactac
ggccggatgtgcccaattgaaacgcctgaaggtcctaacatcggtctgatcaactcactg
tcatcctatgctcggatcaatgaatatggcttcatcgaaacgccataccaccgtgtttca
tgggatacgcacaaggttaccgacaagattgactatctgactgccgatgaagaagataac
tacatcattgctcaggccaacaccaagcttaatgatgacggctcatttgctgatgaagaa
attatgtgccggcataaggatgactatgttgaaacgactcctgaaaatgtcgactacatg
gatatctcgcctaagcaggttgtttccgttgcctcagcatgtattcctttcttggaaaac
gatgactccaaccgtgccttgatgggtgctaacatgcagcgtcaggcggttcctttgatc
aaccctcatgcaccgctgattggtactgggattgaatacaaagccgctcatgactctggg
gttgccttggttgccaagaaggctggtacggttgaatacgtcgatgctcgtgaaattcgc
gttcgtgaagaagacggcacgcttgacacctacaagctgatgaaattccgtcgttccaac
ggtggtaagaactacaaccagcgtccaatcgtcaaggtcggtgaacatatcgatgctgat
gacgttttggctgatggtccatcaatggaacaaggtgaactggcgctgggtcaaaaccca
ttgattgcctttatgacttggcaaggctacaactttgaagatgccattgccatcaatgaa
cgcttgattaaagaagacgtctacacttcaattcatatcgagtcatatgaatctgaagct
cgtgaaaccaagctcggacctgaagaaatgaccagcgagatccctaacgttggtgccgat
gccttgaagaacctggacgaaaccggtgttattcgtgttggtgctgaggttaacgacggt
gacattctggttggtaaggttacgccaaagggaatgactgagctgtcagctgaagaacgg
ctgctgcacgccatctttggtgaaaagtcgcgtgaggttcgtgatacgtcgctgcgggta
ccacacggcggtggcggtatcgttcaagacgttaaggtatttacgcgtgaaaacggtgat
gagctggctcctggtgtcaacaagatggttcgggtctacattgctcaaaagcgtaagatc
caagtcggtgacaagatggccggccgtcacggtaacaagggtacggtttcaatcgtggta
ccggaagaagacatgccatacatgccagatggtacgccaatcgatatcatgctgagtcca
atgggtgtgccttcccgtatgaacattggtcaggttatcgaactgcacctggggatggct
gctcgcaagcttggtatccacattgctacgccagtctttgatggggcaaccgatgaagat
gtttgggaagcagttaaggaagccggactgccatctgatggcaagacgattctttatgat
ggccgcacgggtgaaccatttgaacaacgagtttccgttggtgtcatgcactatctgaag
ctggcacacatggttgacgacaagattcacgctcgttcaattggaccttactcactggtt
acgcaacagccattgggtggtaaggcacaatttggtggtcagcgtttcggtgaaatggaa
gtctgggccctcgaagcctatggtgctgcctacacgctgcaagaaatcttgacttacaag
tctgatgacgttgttggtcgtgtcaacacctatgaagccatcatcaatggtgacccaatt
ccaaagccaggtgttcctgaatccttccgcgtgctggttaaggaactgcaatcccttggc
ctggatatgaaggtgcttgacagtcaaaacgaggaagttcaactcaagaacatggatgaa
ggcgtggccgacatccgcaagctggctcgcgatggcagcgacaagcacgaagaagtcaaa
gacgaagcaaaacaagactag
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integrated database retrieval system
