KEGG   Limosilactobacillus mucosae: LBLM1_08360
Entry
LBLM1_08360       CDS       T03814                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lmu  Limosilactobacillus mucosae
Pathway
lmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LBLM1_08360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmu03019]
    LBLM1_08360
Messenger RNA biogenesis [BR:lmu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LBLM1_08360
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd Bestrophin-like KH_KhpA-B ATP-synt_B KH_NusA_2nd KH_2 ArsP_2
Other DBs
NCBI-ProteinID: AJT50972
UniProt: A0A0D4CLD6
LinkDB
Position
complement(1780060..1781619)
AA seq 519 aa
MSAFGLFIAALAMVVGIIVGYVIRKVSYEKQIAQAHNSAEGIIAAAKKDAATAKKEAILE
AKEESHRYRESVEQELKKRRDEVQRQEDRMLQRETTLDRKDNALEKRENAVSSREHKLDQ
RNEQIQKSQQQVTQLIEQRQAELEKVAQMSHEDAKELLLKQLQNELKTEREVMIRESEQT
AELAADRKAKQLIVEAIQRSAADTVSEATVSVVALPNDDMKGRIIGREGRNIRTLETLTG
IDLIIDDTPQAVVLSGFDPVRREIAKMALERLIQDGRIHPAKIEEAVEKARRDMDAQLRE
TGEQTVFDLGLHAMHPDLIKTIGRMKYRTSYGQNVLDHSIEVAKLAGIMAAELGEDVTLA
KRAGLLHDIGKAVDHEVDGSHVELGVELTRKYKENPVVINTIASHHGDVPAESVIAVLVQ
AADAVSGARPGARSESLEQYIQRLKKLEEIANRNPGVDHSYAIQAGREVRVIVKPDKITD
LQATALAHDIKREIEGQLEYPGHIKVTVIREVRAVDYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgagtgctttcggcttgtttatcgccgcgctcgctatggttgtcggtattattgtcggc
tatgtaattcgaaaagtctcttatgagaaacaaattgcacaggcgcacaatagcgccgag
ggaattatcgctgctgcgaaaaaagatgctgcgacggccaaaaaagaggctattttagag
gccaaagaagaaagtcacagatatcgggaaagtgtggagcaagagcttaaaaagcgtcgc
gatgaggttcagcgtcaagaagaccggatgctgcagcgcgaaaccacccttgatcgcaag
gataatgcccttgaaaaaagagaaaatgcagtcagttcccgcgaacataaactggatcaa
aggaacgagcagattcaaaaaagtcaacaacaagtaacgcaattgattgaacagcgtcag
gctgaactggaaaaagtagctcagatgtcgcatgaagatgccaaagaactgttgttaaaa
cagctccagaatgagttgaagacggaacgcgaggttatgatccgcgaaagtgagcagact
gctgaactggcagctgacagaaaggctaagcagctgattgttgaagcaattcaacgcagt
gctgctgacacggtttcagaagcgaccgtttccgttgtcgccctgcctaatgacgatatg
aaaggtcgaattattgggcgtgaaggacgtaacattcgaactttggaaactttaaccggg
attgatctgattatcgacgacacgccacaagcggtcgttttgagtggttttgatccggtg
cggcgtgaaattgctaaaatggctttggaacgcttaatccaagatggtcgaattcatcct
gccaagatcgaagaagcagttgaaaaagctcgccgagatatggatgctcagctgcgtgag
actggcgaacagaccgtatttgatctgggactgcatgcgatgcatcctgatctgatcaaa
acgattggtcggatgaaatatcggaccagctatggccaaaatgttttggaccattcaatt
gaggttgccaagctggcaggcattatggctgccgagcttggtgaagacgttaccctagcg
aaacgcgctggtttattacatgatatcggcaaggccgtcgatcatgaggttgatggctca
catgtcgaattgggggtcgagctgactcgcaagtacaaagaaaatccagttgtgattaat
acgattgcctctcaccacggcgacgtaccggccgaatcagtcattgccgtattggttcag
gcggctgatgcagtttcaggtgcgcgtccaggtgctagaagcgagtcgcttgagcaatac
attcaacgactcaaaaaattagaagagattgccaaccgcaatccgggcgttgatcacagc
tatgctattcaagccgggcgggaggttcgcgttattgtcaagccagacaagattacggac
ttgcaggccacggctttggcacatgatattaagcgggagatcgaaggacagctggaatat
cctggccatatcaaggttacggttattcgtgaagtacgcgccgtcgattatgctaaatag

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