Lagopus muta (rock ptarmigan): 125686493
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Entry
125686493 CDS
T09141
Symbol
SKIC3
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125686493 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125686493 (SKIC3)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
125686493 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_11
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_9
ANAPC3
TPR_15
ARM_TT21_C
Fis1_TPR_C
DUF3856
TPR_10
ARID
TPR-S
Retrotran_gag_2
HAT_Syf1_M
TolB_N
TPR_5
BTAD
TPR_30
Motif
Other DBs
NCBI-GeneID:
125686493
NCBI-ProteinID:
XP_048786478
LinkDB
All DBs
Position
Z:57073741..57121151
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKVVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSNQTDVHADLQDVYQKLLELYESGDKQKWCDVCN
KLVELYRQGNKYLEAAEICQKLIEVKKEGGAEKVELHQLWKRMIQLLGENVQYQDNKTAQ
LLLSAYEEALNSADTVPNEDHRNLYKDFIQCLSKFPHEATRLEKACDDMMALYPTLSYPL
EVLCLYFIQSGTLSEEALQYFSKLLEMDSSSGPGIIGFGIKCLQEKKYKEAIKSLTEGLQ
KVSQCAGAWHYLAEAQMKVHKYRDAVLSCNQALKNLQTPDGATLQQKNLILQLKAEVLIK
ISDVGAAEEAINALEQVVGASSDPVLLAFRGRAYLNKGLVDEASKISQELLLSHPDVAEA
HALEGFIHYSQKKYEQAERSFQNAIERRAEIAEYHQYLGLTYWFMSDETKKDKGKALTHF
LKAAKLDSYLGSVFCYLGNYYRDVAGDKSRARGCYKKAFELDGTDEESGTAAVDLSVELG
DTDTALSILNEVTEKANAGAAKWAWLHRGLYYLRTGQPSKAVADLQAALRADRMDPNCWE
SLGEAYVSRGSYAAALKSFRKASELNPDHVYSIYRAAAVEQILGKYENAIATYQQILEKT
EEYVPALKGLGECYLMLARSALEKYLDMRAVGYIEQALEFFTRATKNRPDISSLWKLLGD
TCTSVHVISPAKVNVRVLGSLLGKNEGKQMLKKTDLLRLGGRCYGRALKLIPLPNIWCDL
GINYYRQAEHLTAVGTDLNEISELLEKSLQCLKKAVRLDNKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEEINVVAWTNLGVLYLATGNIEQAHEAFKVAQSLEPSYLMCWIGQA
LVAEAVGSFDAMDLFRHTTELAMHTEGAKGYAHWVCSTLQDKSNRDTEQYQYNIVEMNAI
PAAQVVMSKYTERNPDDASAFTMLGYLNDYLELKRQAKDAYERAATLLKNSEDTEKYNTA
MQNYGRSLCAIGECDKAIEVYTSIPLTEFDAIVGIALAYFKKGLLKESIQAYEKALSVAE
SEQDKTHILTALAIIEYKRNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDVTLATA
ALKELLKHEKGSDGIYERCLIASAVYALQGRNLGIQREVSKAIHSYPGNPALWSLLSRLV
PLYTPQKAKGGAVAGSIAHALDLRHGKDVLLNVAVNQLAAGCHMLEDERNNPLKNIQKAI
LICPDNPSAWTVLMAACHAENTVGCLNNTQPKRTDLEMTLVSTISAKTGENDLPHNYIQT
LEDWSLCQAITSLEENGRISEAEALCTKGLKNCPEHPALFLLLRQIQCKQLLQSHKELPD
TILKELHKTVMTSSSSIAAWQWLAKVYQSQGMMVGAEMCYRRSLQLASQQGSWSGKLSSL
LRLAMLALEICMANVSNEHWPSLVQEATTEALKLSSCPLAVLLQALLQYIRKMGARETRR
MLERVVYQPGNPETIVSVARWYLMQHLYAKDDYELIDVLVENAKANGDIRALDLHKKLSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagagcgctagagaagccataagaaataag
gaatataaagaagccttaaagcactgcaaggtagtcttgaagcaagaaaaaaataactac
aatgcctgggtatttattggcctggcagctgctgagttggagcaacctgatcaggccaaa
ggggcgtataagaaggctattgaacttgaaccaaaccagttactggcatggcagggctta
gcaaatttatatgagaaatccaaccaaacggatgtccacgcagacttacaagatgtgtac
caaaaactcttggaactctatgaaagtggagacaagcagaaatggtgtgatgtatgtaac
aagctcgtggaactatatcgccaaggaaataaatacttagaggcagcagaaatatgccag
aaactaatagaagtgaaaaaggaaggaggtgcagaaaaggtggaactccatcagctttgg
aagaggatgatccagttactgggagagaatgtgcagtaccaggataataagactgcacaa
ttgcttttgagtgcatatgaagaggcactgaactctgctgacactgttcccaatgaagat
catcgaaatctttacaaagactttattcagtgcttgtcaaaatttcctcatgaggcaact
agattggaaaaagcttgtgatgatatgatggctttatatccgactttgagttatccttta
gaagtactttgcttgtacttcattcagtcaggtactttgtcagaagaggccttgcagtat
ttttctaagcttctggagatggactcaagtagtggtccaggcatcattggttttggtata
aaatgcctccaagaaaagaaatacaaagaggctattaagagtcttactgaaggtttgcag
aaggttagccagtgtgcaggagcatggcattacttggcagaggcgcagatgaaagttcac
aaatacagggatgctgtcctgtcctgcaatcaagcacttaagaatcttcaaactcctgat
ggtgctactctgcagcagaagaaccttatccttcagttgaaagcagaggttttgatcaaa
atatctgatgttggagctgcagaagaagccattaatgcactcgagcaggttgtgggagca
agcagtgatcctgtgcttttagctttcagaggtcgagcatatttaaacaaaggtttagtt
gatgaagcttcaaagatttcacaagagcttctgttgtcacatcctgatgtagctgaagcc
catgctcttgagggtttcatccattattctcagaagaaatatgagcaggcagaaagaagt
tttcaaaatgctattgaaagaagggctgaaattgctgagtatcatcagtatctggggctc
acttattggttcatgagtgatgagacaaaaaaagataaaggaaaagcactcactcatttc
ttgaaggctgcaaagttggacagctacttgggaagtgtcttttgttatttaggtaactac
tacagagatgttgctggagacaaaagtagagctcgtggttgctataaaaaggctttcgaa
ctggatggaactgatgaagaatctggaacagcagctgtagacttaagtgtggagcttgga
gacacggacactgctctatccatcttgaatgaagtaactgaaaaagcaaatgctggtgca
gcaaaatgggcttggcttcatcgtggactttactacctcagaactggtcagccgtcaaaa
gcagtggctgatttgcaggcagctctcagggctgaccgaatggatcccaactgctgggag
tctctaggggaggcttatgtgagcagaggtagctatgcagcagctctaaaatccttcagg
aaggccagtgagctgaacccagaccacgtgtacagcatttacagagctgcagcagttgag
cagattctaggcaaatatgaaaatgctatagctacctatcagcagatcttagagaagaca
gaagagtatgtacctgcacttaaaggacttggagaatgctatctcatgctggcaagatca
gcccttgagaagtaccttgatatgagggctgtgggttacatagagcaagctcttgaattt
tttacaagggcaacaaagaaccgacctgatatatcttccctttggaaactgcttggcgat
acctgtactagtgtgcatgttatttcaccagccaaagtgaatgttcgagttctaggatcg
cttctgggtaaaaatgaaggcaaacagatgctgaagaaaactgatctgctgagactgggt
ggaaggtgttatggcagagctttaaaattgattcctttgcctaacatatggtgtgatctt
ggaataaattattatcgacaagctgagcacctcacagcagtaggcacggacctaaatgag
atcagtgaactactagagaagtctttacagtgtctcaaaaaagctgtaaggcttgacaac
aaaaatcacctttattggaatgcacttggtgtggttgcttcctgtagtgctatcgggaat
tacgctcttgctcaacattcgttcatcaaatctgttcaagctgaggaaataaatgttgtt
gcctggacgaacctgggggttttgtatctagcgactggaaacattgagcaagctcatgaa
gccttcaaagtagcccagtctctggaaccttcttaccttatgtgttggattgggcaggct
cttgttgcagaggctgtaggcagctttgatgctatggatctcttcaggcacacaactgaa
cttgctatgcatactgagggagcgaaaggctatgcccactgggtatgttcaacactgcaa
gataaaagcaacagagatactgagcagtatcagtacaacattgttgaaatgaatgctatt
ccagcagcccaagtggttatgagcaagtatacagaaagaaatccagatgatgcatctgct
ttcacaatgcttggttacttgaatgactatctggaactaaaaagacaggcaaaagatgct
tatgaaagggctgctacattactgaaaaactctgaggatactgagaaatataacacagca
atgcaaaactacggcagatctctgtgtgccattggtgagtgtgataaagccattgaggtt
tatacatcaataccgcttactgagtttgatgccattgtggggatagcactagcctacttc
aagaaaggactcttaaaagaaagtattcaagcctatgagaaagccttgtctgttgcggaa
tctgaacaagataaaacacatatcctgactgccttggcaataatagagtataaacgaaac
aaagtggatgctgcaaagacactactgtttaaatgctcattaaaggaacctagtacagaa
agtctgaaggctttgtgcacactaggactggtaaagcaggatgttacgcttgcaacagca
gccctaaaggagttactgaaacatgagaaagggagtgatgggatttatgaaaggtgcctt
attgcatctgctgtttatgcactacaaggcagaaacctggggattcagagagaagtctcc
aaagcaatacacagttaccctggtaatcctgccctttggtctcttctgtctcgactagtt
ccattgtatacaccacagaaggcaaaagggggagctgtggcaggaagcattgcacatgcg
cttgatttaagacatggaaaggatgtcctactgaatgttgcagttaatcaattggcagca
ggatgtcacatgttagaagatgagagaaacaatcctctaaaaaatattcagaaggcaata
ctcatctgtcccgataatccttctgcctggacagtgctaatggcagcctgtcatgctgaa
aacactgttggctgtcttaacaacactcaaccaaagagaacagatctagagatgacactt
gtatctacaatttcagccaaaactggagaaaatgaccttcctcataattacatccaaact
cttgaagactggtctctttgtcaagctatcaccagtctagaggagaatggtagaatctca
gaagctgaagcactttgtaccaagggtttaaagaactgccccgagcacccagctctgttt
ttgcttctgagacaaattcaatgtaagcaactgttacagtctcacaaagagcttccagat
accatcctgaaggagcttcacaaaacagtcatgaccagttcatcttccattgcagcctgg
caatggttggcaaaagtgtatcagtctcaaggaatgatggttggagcagagatgtgttac
agaaggagcttgcagttggcatcacagcagggcagctggagtggaaagttatccagtctg
ctcagactggctatgcttgcactggaaatctgcatggctaatgtctcaaatgagcactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactctcttcctgtcccttggca
gttctcctgcaagcgcttctacagtatattcgcaaaatgggagcaagagagactcgtcga
atgttggagagggtggtttaccaaccagggaatccagaaaccattgtgtctgtggctcgt
tggtacctcatgcaacacctatatgccaaagatgattacgaattaatagatgtacttgta
gaaaacgccaaagctaatggggatattagagctctggatctacacaagaaattatcagca
agtgcctag
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integrated database retrieval system
