Lagopus muta (rock ptarmigan): 125696063
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Entry
125696063 CDS
T09141
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmut03037
]
125696063 (NPHP3)
Cilium and associated proteins [BR:
lmut03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
125696063 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_17
TPR_19
NPHP3_N
TPR_11
TPR_6
NACHT
KAP_NTPase
AAA_16
AAA_22
DUF2225
14-3-3
AAA_19
AAA_14
Viral_helicase1
DUF627
Uso1_p115_C
ARM_TT21_4th
DUF4635
Motif
Other DBs
NCBI-GeneID:
125696063
NCBI-ProteinID:
XP_048807247
LinkDB
All DBs
Position
7:complement(41617159..41643624)
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AA seq
1315 aa
AA seq
DB search
MGTASSLVSPAGGVGEVIEDTYGGGEACEIPVEVKPKARLLRGSLRRVGASRPGGLIGAS
FKSTASVQELECVAEYERLKKEYEIFRVSKNNEVASMVKKEAKLDRENKRLRAELQALQK
TYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKRDLEA
KLQRLQAQGIQVFDPEESDSDDNCTDVTAAGAQSEYWNGGALGSEPSMGSMMQLQQSFRG
PEFAHSSIDVEGPFANINRDDWDAAVASILQVTPLFSHSLWSNTVRCFIISTNETQPEVE
IFIRNYSPKLQRICETMGYFFQVVHFPAENENHFKEVRKWEIEKSSLVILLLHLTLPSCL
LEDCEEAFLKNPEEKPRLIYHRMGDDRVSSDSVQQLIEQISYVNKAKMIDHVGDVEEGTY
EIYTCVEKIIKQDILGCEMTELEGKDLGNKEESTAPEEEVFGDVLWDAHDEQEQMEAFQQ
ASNSTCELGFEKYFERLNDLIAAPAPIPPLLVSGGPGSGKSLLLSKWIHLQQKHSPNTLI
LYHFVGRPMSTSSESALIIKRLTLKLMQHSWLVSPLTLDPAKLLEEFPRWLEKLSARHQG
SIIIIIDSIDQIQQAEKHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLNSKD
VKALISAECSSVNVKLTKEQEKKLERHCRSATTCNALYVTLLGKTIARVGSAGNIDETLQ
RCFQCQDTVSLYRLVLRSIQESLCSDKEKSLLREILCVIGVSHNGVSESELMELYPELSS
AVLASLVHSLHKMCMLTYGCGLLKFQHLQAWEMVKLEYMEEGLNVISAYRQKLVDYFTMQ
LSRDRVTWRSADELPWLFQQQGDKQKLHKCLLNLFVSQNLYKRGHFAELLSYWQLVGKDK
SSMAAEYFDSLKEYEKSCEGEESMICLADLYETLGRFLKDLGLLSQAVAPLQRSLEIRET
ALDPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEISENAYGAEHPRVARELDALAM
LYQKQNKYEQAEQLRKKSFKIRQKAARRKGSLCGFALLRQRALQLEELTLGKDTPDNART
LNELGVLYYLQNNLETAELFLKRSLEMRERVLGPSHPDCAQSLNNLAALYNEKKHYEKAE
ELYEKALDIRRRALAPDHPSLAYTVKHLAVLYKKMGKLDKAVPLYELAVEIRQKSFGPKH
PSVATALVNLAVLYCQMKKQTEALPLYERALKIYEDSFGHMHPRVGETLKNLAVLSYEGG
DFEKAAELYKRAMEIKDAETLLIGGKAVSRHSSSGDTFSLKSTLSPNIFLEPGQR
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgtcgtcgctggtgagcccggcgggcggggtcggggaggtgatcgaggac
acgtacggcggcggcgaggcctgcgagatcccggtggaggtgaagcccaaggcccggctg
ctccgcggctccctgcggcgcgtcggcgcttcgcggcccggcggcctgatcggggccagc
ttcaagtccacggcctcggtgcaggagctggagtgcgtggccgagtacgagcgtctgaag
aaagagtatgagatcttccgcgtcagcaagaacaacgaggtggcctccatggtgaagaag
gaggccaagctggacagggagaacaagcggctgcgcgcggagctgcaggcgcttcagaag
acttaccagaaaatacttagagagaaagaaagcgcgttagaagctaaataccaagccatg
gagagagccgccacgtttgaacatgatcgagacaaggtcaaaaggcagttcaagattttt
agggaaacaaaagaaaatgagattcaggacttgctgagggccaaacgggacctagaagca
aaacttcagagactccaggcccaaggaatccaggtgtttgatcctgaagagtctgattct
gatgacaactgtacagatgtcacagctgctggggctcaatctgaatattggaatggagga
gccttgggaagtgagccatccatgggcagtatgatgcaacttcagcagtctttcaggggg
cctgaatttgctcacagctctattgatgttgagggaccatttgcaaatataaacagggat
gactgggatgctgctgttgccagtatattacaggttactcctctgttttcccactctctg
tggagtaacactgtgagatgttttattattagcactaatgagactcaaccagaagtggaa
atcttcattagaaactactcaccaaaacttcaaagaatctgtgaaacaatgggctacttc
tttcaagttgttcattttccagcagaaaatgaaaatcattttaaagaagtacgaaaatgg
gaaattgaaaaaagttcattagtcattttgctcctacatctgactttgccaagttgtttg
ttggaagactgtgaagaagccttcttgaaaaatccagaagaaaaaccccgtctgatttac
cacagaatgggtgatgacagagtcagctcagactcagtgcagcagttaattgagcaaatt
tcttatgtgaacaaagcaaagatgattgatcatgtgggagacgtggaggaaggaacgtat
gagatctatacttgtgtggagaagataattaaacaggatatattgggctgtgaaatgaca
gaactggaaggcaaagatttgggtaataaagaagaatccactgctcctgaagaagaagtt
tttggtgatgtactgtgggatgcacatgatgaacaggaacagatggaagcttttcagcaa
gcctctaattcaacatgtgaactgggatttgagaaatattttgaacgtctaaatgaccta
atagcagcaccagcaccaattccacctctgcttgtatcaggaggaccaggttctgggaaa
tctctccttttgtcaaaatggattcacttgcaacagaagcattcaccaaacactctgatt
ctttatcactttgttgggaggcccatgtctaccagttcagaatctgcattaataattaaa
cgccttactttaaagcttatgcaacattcttggttagtgtcacctctgaccttggatcca
gctaaacttctggaagaatttccccgctggctggagaaactttctgctcgtcatcaaggc
agcataattataattatcgattctattgaccaaatacagcaagctgaaaagcatatgaaa
tggctgatagatccactgccagtgaacgtgagagtgatcgtatcagtgaacgtagaaacg
tgtccacaggcttggaggttgtggcctactcttcatcttgatccactgaattccaaagat
gttaaagctctcattagtgcagaatgtagctctgtgaatgttaaattgactaaagagcag
gagaagaagcttgagagacattgtcgttctgccacaacttgcaatgctttgtatgtcact
cttttgggcaaaaccattgctcgtgttggaagtgcaggaaatattgatgaaacccttcaa
cgatgtttccaatgccaagacacagtgtccctgtacaggcttgttctgagatcaattcaa
gaatcgttgtgcagtgataaggaaaaaagtcttttgagagagatactgtgtgtcattggt
gttagccacaatggtgtgagtgaatctgagctgatggaactgtatcctgagctgtcttct
gcagtgctagcctcactcgttcacagcctgcacaaaatgtgtatgctgacatatggctgt
ggtttgctgaagttccagcatctccaggcttgggagatggtgaaattagagtatatggaa
gaaggtctgaatgttatttcagcctacagacaaaaacttgtggactatttcaccatgcag
ctaagtcgagaccgagtgacttggagaagtgcagatgaacttccctggctcttccaacag
cagggtgacaaacaaaagctacacaagtgtcttttgaatctctttgtatcccagaacctt
tacaaaaggggacattttgcagaattgctgagttactggcagctggttgggaaagataag
agctctatggcagctgagtattttgactctctgaaagaatatgaaaaaagctgtgaggga
gaggaaagtatgatctgcctggctgatctttatgagaccctgggacggtttcttaaggac
ctaggtcttctcagtcaggctgtagctcctttgcagaggtctctggagattcgagagact
gcgctggatccagaccacccaagggtggcacagtcacttcaccagttggcgggagtttat
gttcagtggaagaagtttgggaacgcggaacagctgtataaacaggccctggaaatctct
gaaaatgcttatggagctgaacatcctcgggtagcccgggaactcgatgctcttgccatg
ttgtaccaaaagcagaacaaatatgaacaagctgagcagttgaggaaaaagtccttcaaa
atacgccaaaaagcagcaagacgaaaaggcagtctgtgtggctttgctcttctacgtcaa
agagccctgcaactggaagagctcacactgggcaaggatacaccagacaatgctcgaacc
ctcaatgagctgggagtcctttattacctgcaaaataatcttgagacagctgaacttttt
ctgaagcgctccctggaaatgagagaaagagtcctgggacccagccatcctgactgcgca
cagtctttgaacaacctggcagccctgtacaatgagaagaagcactacgagaaggcagag
gagctctatgaaaaagccttggacatcaggaggagagcactggctccagaccatccctcc
ttggcttacacagtgaaacacctggcagtgctgtacaaaaagatgggaaagcttgacaag
gctgttcctctgtatgaactagctgttgaaatacgacagaagtcgtttggccccaaacac
cccagtgtagcaacagctttggtgaatctggctgttctttattgtcaaatgaaaaagcag
actgaagctttacctctttacgaacgtgcattaaagatttatgaagacagctttggtcac
atgcatcctcgcgtgggagaaactctgaagaacttggctgtgctcagctatgaaggggga
gattttgagaaggcagctgaactttacaaaagagccatggaaataaaggacgcagagact
ttgttgataggtggaaaagcagtttctcgacactcatcaagtggagacacattcagttta
aaaagtacattgtcaccaaacattttcctggaacctggacaaaggtga
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