Lagopus muta (rock ptarmigan): 125696695
Help
Entry
125696695 CDS
T09141
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125696695
Ion channels [BR:
lmut04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
125696695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
125696695
NCBI-ProteinID:
XP_048808676
LinkDB
All DBs
Position
8:17048321..17121790
Genome browser
AA seq
2017 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVITYFNSSL
GENGTFINTTMTIFNWDEYIEDKNHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQAEGEKDEEEFRKSESEDSIKRKGFRFS
IEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHST
FEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPPLPVNGKMHSTVDCNGVVSLVGGP
PALTSPTGQLLPEVMIDKATTASNGTTTETDLRKRRSSSYHVPMDYLTDPSARQRAMSIA
SMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITIC
IVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDG
FIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMW
DCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVA
RIQKGIDFVKRKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVEIGKNLAYL
KEGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDL
EESKEKLNASSSSEGSTVDIGLPPEGEQPEVEPEESLEPEACFTEGCVRRFKCCQVSVED
GKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKV
FTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTL
RALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVN
TTTDERFDISQINNYSQCEELIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIM
YAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTM
MVETDDQSEDMENILYWINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVG
MFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLF
LVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGE
PDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAE
PLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVS
GDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVS
AVVIQRAFRRHLLRQKVKKVSCIFNQDKGKDEDDLPMKEDMIMDKLNENSTPEKTDMTPS
TTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccaccaggacctgacagcttccgctatttcacaagagaa
tcacttgcagctattgaacaacgtatcaatgaagaaaaagctaaaaaatccaaacaagaa
cgcaaagatgatgatgatgaagatggcccaaagccaaacagcgacttggaggcaggaaag
accctgccatttatttacggcgatatacctccaggaatggtatctgagcccttggaagac
ctggacccatattacatcaataaaaaaaccttcatagtattgaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctcctgactggacaaagaatgtagaatac
acatttactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgc
ttagaagattttacatttcttcgagacccgtggaactggctagatttcactgtcattaca
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaatcccaggcttgaagactatcgtgggagcc
ctaattcagtctgtgaagaagctctcagatgttatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctacag
tggcctccagacaattctacttttgaaacaactgttattacctactttaatagctcttta
ggtgaaaatggtacatttattaatacaacaatgacaatatttaactgggatgaatacata
gaagataaaaatcatttctacttcttggaaggacaaaatgatgctctgctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactacgtgctgctgggaaaaca
tacatgatattttttgttttggtcattttcctgggctctttctacctgattaatttgatc
ctggctgtggttgccatggcctatgaagaacaaaatcaagcaaccatggaagaagcagaa
cagaaagaagcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcagcagcagcagctgcagcagctgactcgagagattatagcggagtaggtggaata
ggtggattctctgaaagttcttctgaggcatccaaactgagctcgaagagtgctaaagag
agaaggaatagaagaaagaaaaaaaagcaaaaagaacaagctgaaggtgagaaggatgag
gaagaatttcggaaatccgaatcagaggacagcatcaaaagaaaaggcttccgattttcc
attgaggggaatagactgacatatgaaaagagattctcttccccacaccagtctttgctg
agcattcgtggctccttgttttccccaaggcgcaacagcagaacaagtcttttcagcttc
agaggtcgagcaaaggatgtaggatctgaaaatgactttgctgatgatgagcacagcact
tttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggtgaacgg
cgcaacagtaacattagtcaggccagtaggtcatccaggacggtacctcctcttccagtg
aacgggaagatgcacagcactgtggattgtaatggagtagtttctttagtcggtgggcct
ccagctctgacgtcacctactggacagcttttgccagaggtgatgattgataaagcaacc
actgctagcaatggcactactacagaaactgacttaaggaaaagaaggtctagttcttac
catgttcctatggactacctaacagatcctagtgcaaggcagcgagcaatgagtatagcc
agcatgctcacaaacacaatggaagaacttgaggaatcaagacagaaatgcccaccatgc
tggtataaatttgctaacacttgcttgatttgggactgctgcactccctggctgaaagtc
aaacatattgtaaatttgattgtgatggacccctttgttgatctggccattactatctgc
attgttctaaacacactgttcatggccatggagcactatccaatgacagaacagtttagt
ggtgtcctttcagtgggaaaccttgtgtttactggaattttcacagcagaaatgtttctc
aagataattgccatggatccttactattatttccaagagggctggaatatttttgatggt
tttattgtgagtcttagtttaatggaacttggccttgcaaatgtagaaggattatctgtc
cttcgatcattccgattgcttcgagttttcaagttggcaaaatcttggccaactctaaat
atgctgattaagattattggcaactcagtgggagctttgggcaatttgaccctggtgctg
gccatcattgtgttcatttttgctgtggttgggatgcagctttttgggaaaagctacaag
gaatgtgtctgcaagatctccagtgactgcgaacttccacgctggcacatgcatgacttt
ttccactctttcttgattgtattccgagtgctgtgtggagaatggatagaaacgatgtgg
gactgcatggaggttgcaggccaaactatgtgccttactgtcttcatgatggtcatggtg
attggaaacttagtggtactcaacctgtttctggccttgctcctgagctcctttagttca
gacaaccttgcagctacagatgatgataatgagatgaacaatctccagattgctgtggca
aggattcagaagggtatagattttgtgaagagaaaagtgcgtgaattcatccaaaaagcc
tttgttagaaagcagaaagttttagatgaaatcaaacctcttgaagacctaaacaataaa
aaagacagctgtatttccaaccacacgatagtagaaataggaaaaaaccttgcctacctt
aaagaagggaatggaactaccagtggcataggcagcagtgtggaaaaatatgttgttgat
gaaagtgattacatgtccttcataaacaacccaagtctcactgtgacagtaccaattgct
gttggggaatctgattttgaaaatttaaatacagaggagtttagcagcgagtcagacctg
gaagaaagcaaagagaaattaaatgcctccagttcatcagaaggtagcacagttgatatt
ggactacctccagaaggagagcagccagaagtagaacctgaagaatctctggagcctgag
gcttgttttacagaagggtgtgtgcgaagattcaagtgctgtcaagtcagtgtagaagat
gggaaagggaaaatctggtggaatcttaggaaaacatgctataagattgttgaacacaac
tggtttgagaccttcattgtcttcatgattctcctcagcagtggtgcgctggcatttgaa
gatatatacatagagcaacgtaaaactatcaagaccatgctggaatatgctgacaaagtt
tttacttacatcttcattctggaaatgcttttaaaatgggtggcttatggctttcaaacc
tatttcactaacgcatggtgctggctggacttcctgattgttgatgtctctttggttagc
ttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggacacta
agagctttgagacctctgagagccttgtcgcgatttgaagggatgagggtggttgtaaat
gccctcttaggagcaattccatccattatgaatgtgcttcttgtttgccttatattctgg
ctgatcttcagtatcatgggcgtaaatctatttgctggaaaattttactactgtgttaac
actacaactgatgagagatttgatatcagccaaatcaacaattacagccaatgtgaggag
ctcattaaaaacaatgaaactgccagatggaagaatgtgaaagttaactttgataatgta
ggccttggttacctttctttacttcaagtggctacatttaaaggatggatggatatcatg
tatgctgctgtggattctcgtaatgttttggatcagcctaagtatgaagataacctatac
atgtatctttactttgtcatctttataatctttggatcattctttaccttgaaccttttc
attggtgtcatcatagacaatttcaaccaacagaaaaaaaagtttggaggtcaagatatt
tttatgacagaagaacagaagaaatactacaatgcaatgaaaaagttgggttcaaagaaa
ccacagaagcctataccacgaccagcaaacaaattccaaggcatggtctttgactttgta
acaaaacaagcatttgatatcagtatcatgatacttatctgccttaacatggtcacaatg
atggtagaaacagatgaccagagtgaagacatggaaaacattttatattggattaacctt
gtgtttattgtgcttttcactggagaatttgtcttgaaattgatttcacttcgccattac
tacttcaccatcggctggaatatttttgattttgtagttgtcattctttccatagtagga
atgtttttagctgagatgattgagaaatattttgtgtcccctactttgttccgagtcatc
cgacttgccagaataggtcgcatcctgcgtctcattaaaggcgcaaagggaatccgcact
ctgctttttgctctgatgatgtctcttcctgctttgttcaacattggcctgctgctcttc
ttggtcatgtttatctatgccatatttggcatgtccaactttgcctacgttaagagggaa
gttggaattgatgacatgttcaactttgaaacatttggcaacagcatgatctgcctattt
caaattaccacatctgctggctgggatggcttgttagccccaattcttaacagtggggag
ccggactgtgaccctcataaagatcacccagggagctctgttaaaggcgactgtggcaac
ccttcggttgggattttcttctttgtcagctacatcatcatatcctttctggtggtggtg
aacatgtacattgctgtcattctggagaacttcagtgttgcaactgaagaaagtgctgag
cccttgagcgaggatgactttgagatgttctatgaagtctgggagaagtttgatccagat
gcaacacaattcatagagttcagtaaactatcagattttgcagcttcgttagatcctcct
cttctcatagcaaaaccaaacaaggtccagctgattgcaatggatctgcccatggtaagc
ggtgacagaattcactgcctcgacatcctgtttgctttcacaaagcgtgtgttaggggaa
agtggggagatggatgccctcagaatacagatggaagaccgatttatggcagccaatcct
tccaaagtctcctatgaaccaatcacaaccacattaaaacggaaacaggaggaggtatct
gctgttgttattcaacgtgctttcaggcgtcaccttttaaggcagaaagtcaaaaaagtt
tcatgtatatttaatcaggataaaggtaaagatgaggatgatctgcccatgaaagaagat
atgattatggataaactaaatgagaactccactccagagaaaacagatatgaccccatcc
acaacctccccaccatcctatgatagtgtaacaaagccagacaaggataaatatgaaaaa
gacaaatcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
DBGET
integrated database retrieval system
