Lagopus muta (rock ptarmigan): 125698905
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Entry
125698905 CDS
T09141
Symbol
SLC6A11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125698905 (SLC6A11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmut02000
]
125698905 (SLC6A11)
Transporters [BR:
lmut02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125698905 (SLC6A11)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
125698905
NCBI-ProteinID:
XP_048813786
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Position
11:3987389..4092155
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AA seq
620 aa
AA seq
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MTAEKTIPIINGKPEDVLDPEASSTNLVHSNDKKVHERGHWNNKVEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWATCGHEWNTENCVEFQKLNMSNCS
QISLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGK
VVYVTATFPYIMLMILLIRGVTLPGASEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAI
CLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAE
SGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKIFRR
GYRRELLILGLSIVSYFIGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFECVCIGWVYG
SNRFYDNIEDMIGYKPLSLIKWCWMVLTPGICAGIFIFFLVKYKPLKYNNVYTYPDWGYG
IGWLMALSSMICIPLWICIKFWKAEGSFIEKFRKLITPSSDLKMRGKLGGRCYIAAINDC
DAKLKGDGTISAITEKETHF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaaaagactattcctataattaacggcaagccagaagatgttttggatcca
gaagcttcaagtaccaacctcgtccacagcaatgataagaaagttcatgaaagaggtcac
tggaacaataaggttgaatttgtgctttctgtggcaggggagattattgggttgggaaat
gtatggagattcccatatctttgctacaagaatggaggaggtgctttcctcatcccgtat
gtggttttctttatttgctgtgggataccagtttttttcctggagacagccttgggacag
tttactagtgaaggaggcattacgtgctggaggaaagtttgccctttgtttgaaggcatt
ggatatgctacccaagttatagaggcacatctaaatgtatattacatcattattttagca
tgggctatcttctatctgtttaactgctttactacagaacttccctgggctacatgtggg
catgaatggaatacagaaaactgtgtggaatttcagaaacttaatatgagcaactgcagt
caaatctctttgcaaaatgctacgtctccagtgatggaattctgggaacgcagggtgcta
gccatatctgatggcatcgaacatattgggaatcttcgctgggaacttgcactgtgcctc
ctcgcggcttggactatctgctacttttgcatctggaaaggaacaaagtcaactgggaag
gttgtatacgtaacagccacattcccctatatcatgctgatgattcttctgattcgaggg
gtaacgttgccaggtgcttctgaagggataaaattctatttgtatcctgacatttcccga
ctgtctgacccacaggtttgggtggatgctggtacacagatatttttctcttacgcgata
tgccttgggtgcctgacagccctgggaagttacaacaactataataataactgctacaga
gactgcatcatgctctgctgcttgaacagtggcacaagctttgttgctggttttgctatc
ttttcagtgcttggatttatggcttatgaacaaggtgttcccattgcagaagttgcagaa
tcaggaccaggattagcattcattgcttaccctaaagctgttaccatgatgcctctttct
cctctgtgggcaactctgttcttcatgatgctcatcttccttggactagatagtcagttc
gtgtgtgttgaaagccttgtgacagctgttgtagatatgtatccaaagattttccgaagg
ggctacagaagagaactgttgattcttggcctttccattgtgtcatatttcattggtcta
ataatgttaactgagggtggaatgtacgtctttcagttattcgactcctatgcagctagt
ggcatgtgccttctttttgttgccatatttgaatgtgtctgcataggctgggtttatggc
agcaatcgcttttatgataacattgaggatatgattgggtataaaccattgtcattgatc
aagtggtgctggatggtcttaactccaggtatttgtgcaggaatcttcatttttttcctg
gtgaaatacaagcctttgaagtataacaatgtatatacatatcctgactggggctatggc
atagggtggctgatggctctctcttccatgatttgtatccctttgtggatctgcattaag
ttctggaaggcagaaggctctttcatagagaaattcaggaagttgattacacctagctcg
gatctgaagatgagagggaaacttggaggaagatgctacattgcagcaataaatgactgc
gatgccaaactgaaaggagatggcaccatttcagccattacggaaaaggagacacatttc
tga
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