Lagopus muta (rock ptarmigan): 125699164
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Entry
125699164 CDS
T09141
Name
(RefSeq) toll-like receptor 13 isoform X1
KO
K18808
toll-like receptor 13
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lmut04054
]
125699164
Pattern recognition receptors [BR:
lmut04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
125699164
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
TIR_2
LRR_5
LRR_9
LRR_NXF1-5
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
125699164
NCBI-ProteinID:
XP_048814367
LinkDB
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Position
12:16841683..16856741
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AA seq
975 aa
AA seq
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MMETAEEKARPSTRICPPHCCPPQLLLLLLVTVTLMPKVHPYGFRNCIEDVRASLRFRCI
QRFLESPALAVSDLPPHAVSLNLSYNLMRCLQPSAFARLPRLLTLDLAYNHLETLSPGAF
NGLGVLVMLNLSHNRLTTLAEGVFNSLGNLSSLWVQHNPLSTVSPGALLPLLNLRRLSLR
GGQLNGLGAVAVAVQGLAQLEHLDLCENNLTTLGPGPPLPASLHTLQLCNNSLGDLAGGS
PEMLWHVKILDLSYNSISQAEAFAQLQLRNISLLQLMGNPLDVFRLLDISDIQPRSLDFS
GLVLGTHGLKKVCLRLQGPRALQRLRLQRNGLKVLQCNALASCPVLQELDLSWNRLQQVG
CAGQLLGKKQQEELEVLTVEHNLLKKLPSCQGAQVLPRLYNISFRFNRILTVGFHAFAYA
PALQVLQLNINSLVFLDRQALRGLHNLTELRLDNNLLTDLYNNSFIDLHSLRTLNLRNNR
VSVLFPGVFQGLSELQTLDLGGNNLRHLASQSLQGLSKLRRLYLDRNRLLEVSSRVFAPV
QATLGVLDLRANNLQYISQWLHQPPPFRYLSSLYDLKLQAQQPYGLKMLPHHFFQGLVEL
QWLSLSQNMLRAIPPDVFEDLGKLRSLTLADSSNGIHDLPEGIFRNLSNLQFLDLENVGL
HSLTLEVFGNLSQLQVLRLARNELKTFNASVASRLSSLRYVDLRKCPLSCTCDNTWLQGW
LNNSRVQVVYPYNYTCGSQRNAYVHSFDTRVCFLDLGLYLFAGTAPAVLLLLVVPLVYHR
TYWRLRYHWYLLRCWVNQRWRREEKRYLYDSFVSYNSADESWVLQKLVPELERGAFRLCL
HHRDFQPGRSIIDNIVDAVYNSRKTVCVMSRSYLRSEWCSLEVQLASYRLLDERRDILVL
VLLEDVGDAELSAYHRMRRVLLRRTYLRWPLDPTAQPLFWARLKRALRWGEGGEEEEGES
LGGGAGRPREGDKQV
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagcagaggagaaggcgcggcccagcaccaggatttgtcccccccactgc
tgcccaccccagctgctgctgctgctgctggtgacagtgacactgatgccaaaggtgcac
ccatatggctttcgcaactgcattgaggatgtcagggcatctttgcgcttccgctgcatc
cagcgcttcctggagtcgccggccctggcagtgtctgacctgccaccacacgccgtctca
ctcaatctgtcatacaacttaatgcgctgcctgcagccctctgcctttgcccgcctgcca
cggctgctcaccctggacctggcctacaaccatctggagaccctttcccctggtgccttc
aatggattgggtgtgctggtgatgctgaacctgtctcacaatcgtctgaccacactcgcc
gaaggggtgttcaacagtttgggcaacctgtcctcgctgtgggtacagcataaccccctg
agcacggtgtcacctggtgctctgctccccctgctcaacctgcgccgtctgtctctgcgg
ggcgggcagctgaacggcttgggggcggtggcagtggcggtgcagggcttggcacagctg
gagcatttggatctatgtgaaaacaacctgacaacgctggggccaggcccaccactaccc
gcctcgctgcacaccctgcagctgtgcaacaactcgctgggggatttagcaggggggagc
ccagagatgctatggcacgtgaagatactcgacctctcctacaacagtatctcacaggcg
gaggccttcgcccagctccagctgcgcaacatcagcctgctccagctgatgggcaacccc
ttggatgtcttccgcctgttggacatctctgacatccagcctcgcagcctggatttctct
gggctggtgttggggactcatgggctgaaaaaggtgtgcctgaggctgcagggtccccgg
gccttgcagcggctgcggctacaacgcaacgggctgaaggtgctgcagtgtaatgcgctg
gcgtcgtgtcctgtgctgcaagagctggacctgtcctggaaccggctgcagcaggtgggc
tgtgctggccagctgctgggcaagaagcagcaggaggagctggaagtgctgacagtggag
cacaacctgctgaagaaactgccgtcttgccagggggcccaggtgctgccacggctgtac
aacatttccttccgctttaaccgcatcctgactgttgggttccatgccttcgcctacgcc
ccggccctgcaggtgttgcagctcaatattaacagtctggtgtttctggacaggcaggca
ctgcgggggctgcacaacctgacagagctgcgtctggacaacaatctgctgactgatctc
tacaacaactccttcattgacctccacagcctgcgcaccctcaacctgcgcaacaaccgt
gtctccgtcctcttccccggtgtcttccaggggctgtctgagctgcagacgctggattta
gggggcaacaacttgcgccacctggcctcacagtcactgcagggactgtccaaactgcgt
aggctgtacctggaccgcaacagactgttggaggtgagcagcagagtgtttgccccggtg
caggctaccctaggggtgctggacctgcgggccaacaacctgcagtacatctcacagtgg
ctgcaccagccaccacccttccgctacctgagcagcctgtacgaccttaagctgcaggcg
cagcagccctatgggctgaagatgctgcctcaccacttcttccagggcttggtggagctg
cagtggctgtcgctgtcgcagaacatgctgcgggccatcccaccagatgtcttcgaggac
ctgggcaagctgcgctccctgacattggctgacagcagcaatgggatacatgacctgcct
gagggcatcttcagaaacctgagtaacctgcagttcctggacctggagaatgtaggtctg
cactcactcactctggaggttttcggcaacctcagccagctgcaggtgctgcgcttggcc
aggaacgagctgaagaccttcaatgccagtgttgccagccggctgtcctccttgcgctat
gtggacctgcgcaagtgtccgctgagctgcacctgtgacaacacgtggctgcagggctgg
ctgaacaacagccgtgtgcaggttgtctacccctacaactacacctgcggctcacagcgc
aatgcctacgtccacagctttgacacacgtgtctgcttcctggacctggggctctatctc
ttcgctgggactgcaccggcagtgctgctgctgctggtggtgccgttggtgtaccaccgc
acctactggaggctgaggtaccactggtacctcctgcggtgctgggtcaaccagcggtgg
cggcgggaggagaagcgctacctgtatgacagctttgtgtcctacaattcggctgatgaa
agttgggtgttgcagaagctggtgcctgagctggagcgtggcgccttccgactctgcttg
caccaccgtgacttccagccgggccgcagcatcattgacaacatcgtggatgctgtctac
aacagccggaagacggtgtgtgtgatgagccgcagctacctgcgcagcgagtggtgctct
ctggaggtgcagttggccagctaccggctgttggatgagcggcgtgacatcctggtgctg
gtgctgctggaggacgtgggcgatgctgagctgtctgcctaccaccgcatgcgacgggtg
ctgctgcggcgcacctacctgcgctggcctctcgaccccacagcccagccgctcttttgg
gcacggctgaagagggcactgaggtggggagagggaggagaagaggaggaaggagaaagt
ttgggtggaggggcgggaaggcccagggagggagacaagcaggtgtag
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