Lagopus muta (rock ptarmigan): 125699204
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Entry
125699204 CDS
T09141
Symbol
CDH5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04514
Cell adhesion molecule (CAM) interaction
lmut04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125699204 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125699204 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125699204 (CDH5)
04090 CD molecules [BR:
lmut04090
]
125699204 (CDH5)
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Major cadherins
125699204 (CDH5)
CD molecules [BR:
lmut04090
]
Proteins
125699204 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
125699204
NCBI-ProteinID:
XP_048814451
LinkDB
All DBs
Position
12:8300221..8328976
Genome browser
AA seq
772 aa
AA seq
DB search
MKKLILLFSLFLAPAFCYKENQKTKQNFSSNNTSHKRLKRDWIWNRMHIREEIDSPLPHH
VGKLTSSVGNKNAMYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRN
NRSLEPPSKFIIKVYDINDNAPIFVQKVFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHA
TVTYQIIKGNEYFTVDDSGVISTARADLDRENQSTYEIIVKAKDALGLTGESSTATVIIR
LTDINDNFPVFKHPSFHFKVPENVSVGGEVGRVEVEDIDEPQHRHTKYSFVRGDYRDTFE
IVANPFTNEGIIRPKKPLDFEKVAEYRFDIEATDHNVNPAYYKPGGSKSISTITIEVTDI
DEPPVFTKLPYEFKVQENDREIKTLGSAWAYDPDAAKRKIRFVRRKASPNGDYVRVSDTG
IIQLPKPLDREFSSSYNITVAAQEILEDGRLSDQESHAHVHVIVTDENDNAPELVYPEEP
RVCENAAPGKVIIRISATDKDETSPRGFFRYSLTSEDSNFSLIENYDNTANITVKYGQFN
RELAKIHYLPVIISDNGDPDLSSTNTLVISVCKCNEKGDFTFCEERAKQVGVSIQALVAI
FICIFTIIVIAMLILLRKRHKKDLSGLRRNVAEIHEQLVTYDEEGGGEMDTTSYDVSVLN
SVRKNGIKPEVVPSAYAQVQKPPGNTTSGAGEMEMMIEVKKDEADNDRDLLPYDTLHIYG
YEGAESIAESLSSLESGSSDSDIDYDFLNDWGPRFKMLAELYGSETNEDFVY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcttattctgcttttctcactgttcttggctccagcattctgttataaagaa
aaccagaaaacaaaacaaaacttttcttcaaacaataccagtcataaacgacttaagaga
gactggatatggaaccgaatgcatatcagagaagagattgattcaccattaccacatcac
gttggcaagctcacatcgagcgtagggaacaagaatgctatgtatattattgaaggtgaa
tctgccaacaccatctttaaagtgcaagggtacgacggcgacatatacgcttttgagagg
ctggacagagaaaagaaggcagagtatgagctgacagcgcacattattgacagaagaaac
aaccgatcactggaaccaccatctaaatttattatcaaggtttatgatattaatgacaac
gctcccatttttgtacaaaaggtattcaatggatctgtcccagaaatgtcacgattagga
acctcagttaccaaagtgacagctgaagatgctgatgacccaacagttgcaggtcatgcc
acagttacctaccaaatcattaaaggaaatgaatatttcacagttgatgactctggcgtc
atttccacagccagagctgatttggacagagagaatcaatcaacatatgaaattattgtt
aaagcaaaagatgctctcgggcttacgggggagtcaagcacagctacagtcattatcagg
ttaacagacatcaatgacaacttcccagtattcaaacacccatcatttcattttaaagtt
cctgaaaacgtttcagtaggaggagaagttggccgagtcgaagttgaagatattgatgaa
ccacaacacagacatacaaaatacagttttgtcagaggagattacagggacacctttgaa
attgtagcaaatccattcaccaatgaagggatcattagaccaaagaagcccttggacttc
gagaaagtagcagagtacaggtttgacatcgaagcaacagatcacaacgttaaccctgcc
tactacaaacctggtggctccaagagcatttcaacaattaccattgaagttaccgatata
gatgagcctcctgtcttcaccaaactaccatatgaattcaaagtacaggagaatgatcgt
gaaataaaaacacttggctctgcttgggcatatgaccccgacgcagctaaacggaagatc
agatttgttcgacgaaaagctagtcctaatggagactatgtgagagtatctgatactgga
attattcagcttcctaagcccctagatagagaattcagctcctcatacaacatcactgtg
gcagcccaggaaatcctggaggatggccgtctttctgaccaagaatcacacgcacacgtt
cacgtcatcgtcactgatgaaaacgataacgctccagaactcgtttatcctgaggaaccc
agagtgtgtgaaaatgctgcgccaggcaaggtaatcatcaggatttcagctactgacaag
gatgaaacatcacctagaggtttcttcagatactccctaacctcagaagatagcaacttc
tccttgattgagaactacgataacacagctaatatcactgtcaagtatggacagtttaat
cgtgaacttgccaaaatccactacctgcctgtcatcatctcagacaatggcgatcctgac
ctcagcagcacaaacacacttgttatcagtgtctgcaagtgcaatgaaaaaggcgacttc
actttttgtgaggaaagagctaaacaagttggagttagtatacaagcactagtcgcaatt
tttatctgtatcttcactatcattgtgattgcaatgctgattcttctaaggaagagacac
aagaaggatctgagtggactcaggaggaacgtggcagagatccacgagcagcttgtcact
tatgatgaagaaggtggtggtgaaatggacaccaccagctatgatgtgtctgtgctcaac
tctgtgcgcaagaatggaataaagccagaagtggtgccttctgcatacgcacaggtccaa
aagcctcctggaaatacaacttctggcgcaggagaaatggaaatgatgatcgaggttaag
aaggatgaagctgacaacgacagggatctgctgccgtatgacacacttcacatttatggc
tacgaaggggccgagtccattgcagaatctctcagttctttggaatcaggctcttcagac
tcagatattgattatgacttcctaaatgactggggacccaggtttaaaatgttagctgag
ctgtatggatcagaaacaaacgaagattttgtgtattaa
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