Lagopus muta (rock ptarmigan): 125700425
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Entry
125700425 CDS
T09141
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmut04515
]
125700425
Cell adhesion molecules [BR:
lmut04515
]
Cadherins
Protocadherins
125700425
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Big_9
Motif
Other DBs
NCBI-GeneID:
125700425
NCBI-ProteinID:
XP_048816936
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Position
14:1371263..1373701
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AA seq
812 aa
AA seq
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MAAARQVLCVWALLGVARVRCEPIRYSVAEEGESGSPVGDVAEDAGLAPAQLWARRARIA
SPAGRQHFRLERGSGRLVVAERLDREEMCGRSRTCTLAFELLLADPLQFFPIEVSVEDVN
DHSPVFPDERLTFKILETSDPGSHFPVAAAQDLDIGSNDIQAYSIVPVNDYFRVFSQRRH
EGSMNVELVLEKPLDREEQPEMDFTLVATDGGSPPRTGTTQIYIIVLDVNDNKPIFTQDT
YNGQVAENAPEGSLVLRVLANDADVGINGDISYQFIQSVGQSQPPFTIDTRNGEIRVKEH
LDFEAAQKHELSVQATDGGGLWTLCHVLIDVLDVNDNAPEIVVSSFSSPIPENAAPGTVV
ALFSVTDKDSGVNGEISCALQEQLSFSLRPAFRNYYELVTVSALDREQTARYTVVVTAAD
AGSPRLSSSHTFTVDIWDVNDNAPVFNQTSYTMYVHENNVPALLVGAVQARDSDAGANGK
VSYSLVAADPPEREPCSCVSVNSESGAVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSV
VVRLLVVDENDNAPLVLHPSAQDGGRAWSEPVPAWAEAGDLVSKVVAVDADSGQNSWLSY
RLLRATEPGLFAVGAQSGEVRLRRPPTERDAAKQQLVVLVRDNGRPPLSATAALSVLLLH
GSRDAELPQQSPAAHDDDGSLTASLIVALVLVSLLFLVSAAAFAACKACKSKEPSSGHVL
YGPSGVQSCVADGAAAGTLPHAYCYELSLSTGSGNSEFQFLKPVLPSLPAQRCSTGVAGD
DAEHFPAAPVPVGDADVESPGMQSVGQFHGFN
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgaggcaagtgctgtgtgtgtgggctttgctgggcgtggcgcgcgttcgc
tgcgagcccatccgctactccgtggccgaggagggcgagagcggctcgccggtgggcgac
gtggcggaggacgcggggctggccccggcgcagctctgggctcgccgggcgcgcatcgcc
tcgccggcgggccggcagcactttcgcttagagcgcggcagcggccgcctcgtagtcgcc
gagcgcctcgatcgggaggagatgtgcggacgctcccgcacctgcacgctcgccttcgag
ctgctgctcgccgacccgctgcagttctttcccattgaggtgtccgtggaggacgtcaat
gaccactcgccggtcttcccggacgaacggctgacctttaagattctggaaaccagtgac
ccgggctcccatttccccgtggcagcagctcaggacctggacattggcagcaatgacatc
caggcttacagcatcgttccagtgaatgactatttccgtgtattctctcaaaggaggcat
gagggcagtatgaatgttgagctcgttttggagaagcctctggacagagaggagcagcca
gagatggatttcactctcgttgccacggatgggggctctccgcccaggactggaaccaca
caaatatacatcatagttctggatgtaaatgacaataaacccattttcacccaggataca
tataatgggcaagttgcggaaaatgcacctgagggctcattagttctccgtgtgttggcc
aacgatgcagatgtgggaattaatggtgacatttcctatcagttcatccaatctgtgggc
cagagccaaccaccgtttacaatcgacactaggaatggagaaattcgagtaaaagaacac
cttgattttgaggctgcacagaaacatgagctgagcgtacaggctacagatggtggagga
ctgtggactctctgccatgtattaatcgacgtgctggatgtgaatgacaacgcaccagag
atcgtggtcagttccttcagcagcccgatccctgagaatgcagcacccgggacagtggtc
gcactcttctctgtcaccgacaaggattccggtgtgaatggggagatcagctgtgccctg
caagaacagctgtccttctccctgcggccagcctttaggaactactacgagctggtgacc
gtgagcgcgttggaccgggagcaaacggcacgttacacggtggttgtcacggccgcagat
gcagggtctcctcgtctgagcagcagccacacgttcaccgtggacatctgggacgtgaat
gacaacgcgcccgtcttcaaccagacgtcgtacaccatgtacgtgcacgagaacaacgtc
cccgcgctgctggtcggggccgtgcaggcaagggactcggacgcgggagccaacggcaag
gtgagctattcgctggtggcggccgatccgcccgaacgagagccgtgctcgtgcgtgtcc
gtgaactccgagagcggagccgtgttcgtgctgcggccgctggactacgagcagctgagg
cagctggaggtggtggtgagcgctgcggacgcggggtcccctcccctgagcagcagcgtc
gtcgtccgcctgctggtggtggacgagaacgacaacgcgccgctggtgctgcaccccagc
gcgcaggacggcggccgtgcttggagcgagccggtgcccgcgtgggccgaagcgggggac
ctggtgagcaaagtggtggccgtggacgccgactcggggcagaactcgtggctttcgtac
cggctgctgagggccacggagccggggctgtttgccgtgggcgcgcaaagcggggaggtg
cggctgaggaggccgccgacggagagggacgcggcgaagcagcagctggtcgtgctggtg
cgggacaacgggcggccgccgctgtcggccaccgcggcgctcagcgtgctcctcctgcac
ggctcccgggacgccgagctgccgcagcagagccccgccgcgcacgacgacgacggctcc
ctcaccgcctccttgatcgtcgccttggtcttggtctcgctcctgttcctggtgtcggcg
gcggcctttgcggcgtgcaaggcgtgcaagagcaaggagccgagcagcgggcacgtgctg
tacggccccagcggcgtgcagagctgcgtggctgatggggccgctgccgggaccctgccc
cacgcctattgctacgagctcagcctcagcacgggctcgggcaacagcgagttccagttc
ctcaagcccgtgctgcccagcctgccggcgcagcgctgcagcaccggggtggccggcgac
gatgccgagcatttccctgctgcccctgtccccgtgggggatgctgatgtcgagagcccc
ggcatgcagtctgtgggacagtttcacggttttaattaa
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