Lagopus muta (rock ptarmigan): 125701378
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Entry
125701378 CDS
T09141
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125701378 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125701378 (SS18L1)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125701378 (SS18L1)
GBAF(ncBAF) complex
125701378 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
125701378
NCBI-ProteinID:
XP_048819332
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All DBs
Position
16:complement(6201037..6215737)
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AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNINLGPGGMTQSASNQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVPMQQSGQNTMPTTSLSMSVSSHGTGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcctttgcttctgctcgcccgagaggcaaaggggaggtgacccagcaaact
atccagaagatgttagatgaaaaccaccacctaatacagtgtattatggattatcagagc
aaggggaaaactgcagaatgtactcaataccaacaaatcttgcacagaaaccttgtttac
ttggcaacaatagcagattctaaccagaatatgcagtccttgcttcctgctccaccaacg
caaaacataaacttgggcccaggaggaatgactcagagtgcatccaaccagtctcttcat
tcacagagcaatctcagtgatgcaatcgggacgggccttcctccttcctccctcatgcag
agtcagattagcaatggtccaaaccacgtgcctatgcagcagtcaggccagaacacaatg
cccacaacctctctgagtatgagtgtcagcagtcacggaactgggcctggttatagccat
acagtgcctgcatctcagaatgtgccaatgcaaggccagggctcgataggcaattatgtc
tctcgaacaaacatcaacatgcagtctaatccagtctccatgatgcaccagcaagcagca
acgtcacattacaactcggcacaaggagggagccagcattaccaggggcagtcttccatt
gccatgatgagccagagcaaccagggcaacagcatgatgggtcagcgaccgatgggcccc
tacagagcttcccagcaaggttcctcacagcagtacatgggtcaggaggaatactacagt
gagcagtacagtcatggacaaggctcatcagaacctatgaatcagcaatattatccagat
ggacatggtgactatgcctatcagcagtcatcctacactgagcagagctatgacaggtca
tttgatgactctacacaacactattatgaaggaggaaactcccagtacagccagcagcag
gcaggataccaacagggagctgcacaacagcaaacatattcccagcagcaatacccgaat
caacaaagttacccaggacaacagcaaggatatggtcctgcacaaggagcatcttcacag
tattccagctaccaacagggacaggggcagcaatatgggagttacagagcttctcagaca
ggaccatccgctcagcagcagaggccttatggctacgagcagggacaatatggaaattac
cagcaataa
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