Lagopus muta (rock ptarmigan): 125702711
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Entry
125702711 CDS
T09141
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
KO
K03172
TNF receptor-associated factor 1
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125702711 (TRAF1)
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Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
zf-C3HC4
TRAF3_RING
TRAF2_zf
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125702711
NCBI-ProteinID:
XP_048822296
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Position
19:complement(8288181..8300687)
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AA seq
558 aa
AA seq
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MAEKASGGPQDIPSSSPDENEFPFGYPTSICEDVPEQKYLCSNCNNVLKKALQTLCGHRY
CSACLSWIVRNNKNPVCQKCKEEDPSTLSEGSLLAEERAFGDAAINKEISELRVHCVTLG
CSWCGTMKNFEEHQILCEYALIPCHTGCGHVVMRKKLADHLENGCVNNMTVCHKCKQSSS
SSEYQKHSCEGNLYREQKHVQAETPSNEKQNRSGLSGSTDGCRFSEVGCSFGGSKEVIKE
HEKAAVGTHMLLLLQYVKQLKANLSTASKAANGFIPQTELNVNGAEKSISDLCIPGSLHI
NGDLEADCLTRTSVPRDESIVQQLVREKVISELENKLHVFENIVAVLNKEVETSNLEITA
FRRQSELDQNIIRGLELKIAELHCCLTQKDAGLSRLHKSLLFSEQTSYDGVFLWKITDVS
QKLQDSVTGRAVSLYSPAFYTAKYGYKVCLRIYLNGDGMGKGTHISLFFVVMKGDYDALL
PWPFRHKVTFMLLDQNNREHIIDAFRPDLASASFQRPVHDMNVASGCPTFLPLTKLQSPK
HAYVKEDTLFLKCIIDTN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaagcaagcggaggcccgcaagatatccccagctcttctcccgatgaaaac
gagtttccttttggatatcccaccagcatctgtgaagatgtgcccgagcagaagtacctg
tgcagcaactgcaacaacgttctgaagaaagccctgcagacgctctgcgggcacagatac
tgctctgcctgcctgtcctggattgtccggaacaataaaaatccagtttgccagaaatgt
aaagaggaggatcccagcactctgagtgaaggaagcctattggcagaggaaagggccttt
ggggatgctgccattaacaaggagatttctgagctcagagtgcactgtgtgacccttgga
tgcagttggtgtggtaccatgaaaaacttcgaagagcatcagattctgtgtgaatatgct
ttgatcccttgtcacactggctgtgggcacgtggtgatgaggaagaaacttgcagatcat
ttggaaaacggatgtgttaataacatgaccgtgtgtcacaagtgtaagcagagctcatcc
agcagtgagtaccaaaagcattcatgtgaaggcaatttatatagagagcagaagcatgtg
caagcagaaacaccatcaaacgaaaagcagaaccgttctgggctctcaggcagcacggat
ggatgtcggttttctgaggttggctgttcctttgggggcagcaaagaggtgataaaggag
catgaaaaagctgcagttgggactcacatgctgcttctgctgcagtacgtaaagcagctg
aaggcaaacctgagcactgcttccaaagctgcaaatggtttcatcccacagacagagctg
aatgtgaacggtgcagaaaaaagcatctctgatctgtgcatcccaggcagtctgcacatc
aatggggatctggaagcagactgtttaaccagaacttctgttcccagagatgaatctatc
gtacagcagctagtgagggagaaggtgatttctgagcttgaaaataagctacatgtgttt
gagaatattgtggcagtgctcaataaagaagtggagacctccaacttggaaatcacagcg
tttcggaggcagagtgaacttgatcagaatataatacgaggccttgagctgaagattgca
gagttgcattgctgcctgacccagaaggacgcaggcctgagcaggctccataagagcctt
ctgttctctgagcaaacttcctacgatggggtctttttgtggaagatcacagatgttagc
cagaagctacaggactcagtgacgggcagagcagtcagtctgtactcaccagcgttctac
actgcaaagtatggctacaaggtgtgcctgaggatttatctgaatggggatgggatggga
aaaggaacccacatatccctcttctttgttgtcatgaaaggagactacgatgctctgctc
ccgtggcctttcaggcacaaggttacatttatgttgctggaccaaaacaacagagagcac
attattgatgcattccgcccagacttggcttctgcttcctttcagagacctgtgcacgac
atgaatgttgccagcggctgtcccaccttcctccctctgaccaaactgcagtccccaaag
cacgcctatgtgaaagaagatacacttttccttaaatgcatcatagatacaaattag
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