KEGG   Loa loa (eye worm): LOAG_17059
Entry
LOAG_17059        CDS       T02664                                 
Name
(RefSeq) TDP1 protein
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
loa  Loa loa (eye worm)
Pathway
loa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LOAG_17059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:loa03400]
    LOAG_17059
DNA repair and recombination proteins [BR:loa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     LOAG_17059
SSDB
Motif
Pfam: Tyr-DNA_phospho Peptidase_C48 Gp-FAR-1 Acetyltransf_14
Other DBs
NCBI-GeneID: 9939699
NCBI-ProteinID: XP_020306712
UniProt: A0A1I7W0R4
LinkDB
AA seq 672 aa
MKRGMTKALACVAQECDDLESKGSEGKRMKQNCLMDKLYFNKVVGLAEQYNVNAFSFAEL
LELISPVASIHFNFMIDLRWLLTQYPGRLRQGPITLIVGERMGTDFTLTKTAVKQCGVNN
VNVGRARLMIPFGTHHSKISIFESNTGRVHIIIATANLLESDWNFKTQAFFHCSGNELAA
GDCPDRNGSDFQTDLVKYLDEYKTSQDWGLIEHWRDRVSNIDLSQVKARVVYSVPGTHKG
VQLTKYGHPRLRVILKELFGDVKNMDGFTYHAQCSSLGSLGAAPQYWLTGQFLNSLSGGA
ETDGEHLRIIYPCVEDVRNSNEGYAAGGSFPYSNSVAVKQPYLLNFMHKWSSDHLGRSRA
MPHIKTYAAFAKDSLKPSWLLITSANLSKAAWGDYQSKKPQLTIRSYEFGLLFSDPESLD
MLPYDLPLTKYDDNDRVWIVDKTYRKPDIFRKTWPMAKSGKCVLSFGDTVLYEADLKALE
NGRWLSDPVISFAFEYLHTRILDETKRDKISFINAAVCQLIKLSTPDEVTELLDELTLKE
KEHVIFVVNDHDDPSRSGGSHWSLLICRRDLQPHFLIIDSAQGTISANQKATDKLIQILA
KYFGLPVDTRIERATKQYNSMDCGMFVIEYTRHYIESLKRDEFNVDFTQLNADDVKKQRK
VWGSLIRSLAEE
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgaagcgggggatgactaaggcgttggcgtgtgtggctcaagaatgtgatgatcttgaa
tcaaaaggatcagaagggaaacgtatgaaacaaaattgtttgatggataaactgtacttc
aacaaggttgtaggtctagcggaacagtataatgtcaatgctttttcgttcgcggaattg
ctggagcttatttcgcccgtggcatcaatccatttcaatttcatgattgatcttcgttgg
ttacttacgcagtatccaggtcgattacgacaaggaccaattacattaattgtgggcgaa
agaatggggactgactttaccttaactaaaactgcagtaaagcagtgtggagtaaataac
gttaatgttggacgagcacgcctaatgataccgttcgggacacatcattccaaaatttcc
atttttgaaagtaatactggaagagtgcatattatcatcgcaactgctaacttattggaa
agcgattggaacttcaaaacacaagcattctttcattgtagtggaaatgaactggctgcc
ggtgattgtcccgaccgaaatgggtcagatttccaaactgatttagtaaaatacttggac
gaatataaaacaagtcaagattggggtcttatcgaacactggcgagatcgcgtttctaac
attgacttgtcccaagtgaaggcacgagttgtttactctgtgccaggaactcataaaggc
gttcaattaacgaaatatggtcacccgagattgcgcgtaatactgaaggaattatttggg
gatgtaaagaatatggatggttttacttatcatgctcagtgcagctcacttggtagtctt
ggagcagcaccgcaatattggcttacgggacagtttttaaacagtctctctggtggtgcg
gagacagatggcgaacacttgcgaattatctatccttgtgtggaagacgttcgaaattct
aatgaaggatacgcagcaggtggctcatttccttacagtaatagtgtagcagtaaagcag
ccatatttgcttaatttcatgcacaagtggagcagtgatcatctggggcgttctcgtgct
atgccacatatcaagacatatgcagcttttgctaaggactctctaaaaccgtcttggttg
cttatcacaagtgccaacctttccaaggcagcttggggtgattaccagtcaaaaaaacca
caattaactattcggtcgtatgaatttggcttgttgttcagtgatcctgaatccttggat
atgttgccatatgacttgcctttgacaaagtatgatgacaacgaccgtgtgtggatagta
gataagacatacaggaagccagatatatttcgaaaaacctggcctatggcgaaatcgggg
aagtgtgtcctgtcgtttggtgatactgtactttatgaggctgatttgaaagcgctggaa
aatggacggtggcttagtgatcccgttatttcgttcgcattcgaatatctccacacgaga
attttggatgagactaagagagacaaaattagctttataaatgcagcggtatgtcagctg
attaagctaagcacaccagatgaagtgacagagctcctcgatgagcttacacttaaagaa
aaggagcatgttattttcgttgtgaacgatcatgatgatccatcaagaagcggtggaagt
cattggtcattgcttatatgtcgccgcgatcttcagcctcattttctgatcattgatagc
gcacagggaaccatttcagcgaatcagaaagcgacagataagctgattcaaatattagca
aagtatttcgggcttccggtggatacacgcatcgaacgagccacaaagcaatacaatagc
atggactgcgggatgtttgttattgaatacacccgacactatatcgagagtttgaaacga
gatgaattcaatgttgatttcacacagctgaacgcagacgacgttaaaaagcagcgaaaa
gtgtggggttcattgattcgttcgctcgccgaagaatag

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