Lepisosteus oculatus (spotted gar): 102686181
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Entry
102686181 CDS
T07349
Name
(RefSeq) CD209 antigen-like protein B isoform X1
KO
K06563
C-type lectin domain family 4 member L/M
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03260
Virion - Human immunodeficiency virus
loc03264
Virion - Flavivirus
loc04145
Phagosome
loc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
102686181
03264 Virion - Flavivirus
102686181
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102686181
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102686181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102686181
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
loc04054
]
102686181
04090 CD molecules [BR:
loc04090
]
102686181
04091 Lectins [BR:
loc04091
]
102686181
Membrane trafficking [BR:
loc04131
]
Endocytosis
Phagocytosis
C-lectin receptors
102686181
Pattern recognition receptors [BR:
loc04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
102686181
CD molecules [BR:
loc04090
]
Proteins
102686181
Lectins [BR:
loc04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
DC-SIGN subgroup
102686181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Ly49
SHE3
Scaffolding_pro
Lectin_N
MAD
DUF3450
ZapB
Motif
Other DBs
NCBI-GeneID:
102686181
NCBI-ProteinID:
XP_015193378
Ensembl:
ENSLOCG00000007331
LinkDB
All DBs
Position
LG26:complement(12082082..12116623)
Genome browser
AA seq
371 aa
AA seq
DB search
MSEEVMYSSVTFSKNCSRGTPVKQDEVTYAEVKTARAPSAQTAPPPGAPGKQDEVTYENV
GTAGSAPAQTALSPEQPATPAELSRLEPVTCQGHCILVKAPSIPLPYRLAAVCLGLLCAV
LLIAIIVLIFFYNGNSQNISKLVKELDHLRVNYSNLTAAHNGLEVDFRNLTATHNKLQED
FRNLTVSYSNLTGINDKLQNKTEILQSLISKLKKHFSVDQYCPVTDQNTLEKDCRPCPWG
WELFSTKCYYFSTDALSWNYSRTACRKLGADLVVINNRTEQEFIQKQIKGGEYWMGLSDA
AAEGTWIWVDGTQPIEWYWMKNQPDDYENEDCLATATPTADQITSLNNWNDNKCELPLLR
ICEGSSLPLSP
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagaggttatgtattcctctgtgactttttctaagaactgcagtcgtggaaca
ccggtgaaacaggatgaggtgacctatgcagaggtgaagacggcaagagctccatcagcc
cagacagcacctcctcctggagcaccagggaaacaggatgaggtgacctatgagaatgtg
gggacagctggatctgccccagcacagacagcactatctcctgaacaaccagctacccca
gcagaactatccaggcttgagccagtcacatgccaagggcattgcatcttggtgaaagct
ccatccatccctcttccttacagactggctgcagtttgtctggggctcctgtgtgctgtc
ttactgattgctatcatagttctgatattcttctataatggcaattctcagaatatctcc
aagttggtgaaggaactggatcacctgagagtgaactacagcaacctaactgcagcccat
aacggattagaggtggactttagaaaccttactgcaacccataacaagttacaggaggac
ttcaggaacctgactgtaagctacagcaacctgactggaatcaacgacaagctgcagaac
aaaacggaaatcctccagtctctgattagtaagctgaaaaagcatttttctgtggatcag
tactgccctgtcacagaccaaaacacactggaaaaagactgtagaccttgtccttggggc
tgggagctcttcagcaccaagtgttactacttctctactgatgcactgagctggaattac
agtcgcactgcctgcaggaagctgggagctgatctggtggttataaacaatagaactgaa
caggagttcatccagaagcagattaaaggaggggaatactggatgggactgagtgatgca
gctgcagaggggacctggatctgggtggacggcactcaacccattgaatggtactggatg
aaaaatcagcctgacgattacgaaaatgaggactgtctggctactgctactcctactgct
gatcagattacttctttgaacaactggaatgataacaaatgtgaattaccactgctcagg
atctgtgaaggcagctccctgcccctgtctccttag
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integrated database retrieval system
