Lepisosteus oculatus (spotted gar): 102688226
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Entry
102688226 CDS
T07349
Symbol
brwd1
Name
(RefSeq) bromodomain and WD repeat-containing protein 1 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102688226 (brwd1)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102688226 (brwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Bromodomain
WD40_CDC20-Fz
EIF3I
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
102688226
NCBI-ProteinID:
XP_015197084
Ensembl:
ENSLOCG00000001608
LinkDB
All DBs
Position
LG3:1045422..1069022
Genome browser
AA seq
2609 aa
AA seq
DB search
MPTSTLGGDVTPPGRAEPQRGKTRPGSVSQPARHRQCAAQTAGERRPGITAKPPFEPHTA
FPSSAPSPQPRGSGEGLFSLSPPTSPRFLCAGGSIHGAAPACSLQWRPERAERRAGAAEE
GVRALPPEINKYLSLSPSATVGGENRPRLLLRLPHLTMAGTTAKSQSVSLLESELYYLIS
RFLTTGPCRRAAQVLASELEEYELLPRRLDWRGDEHPRSYEDLVRANSHVAPDHLLQICR
QLGPLLDRQVPSCVPGVGSLLGAGRHSALRLDKDFKKVVWKGSAFAALRRGRPPEMPPTY
SDPPNLVEIYRARELTGTERFSSACPVTHYQRMKMHRRILGHLSAVYCVAFDRTGLRIFT
GSDDCLVKIWSSFDGRLQSTLRGHSAEISDLAVNFENTLMAAGSCDKSIRVWCLRTCAPV
AVLQGHTGSITSLQFSPCAKGTVRYLVSTGTDGMVCFWQWDASNTSFVDRPHKFTKRLRP
GVQMVCSSFSPGGMFLATGSTDHVIRIYYLGGGSPERCSELEAHTDKVDSIQFCNTGDRF
VSGSRDGTARIWKLQQQRWRSILLDMATNLPGSAPAAAEESFFKSKVTMVAWDRHDHSVI
TAVNNHLLKVWNSYTGQLLHVLKGHEDEVFVLEPHPFDSRILLSAGHDGNVFIWDVVRGT
KTQHYFNMIEGQGHGAVFDCKFSPDGQHFACTDSHGHLIIFGFGSSKPYEKLPDQMFFHT
DYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPPRYQRLVPGREGFADEHLVPQ
LGYVATSDGDVVEQVISQQTGDQDDAGQEPSMLDGFIRELQEQQDRQNGAEPGAPPSVEG
TPRRVFRSQSADVQSSPSVGLRRSGQVEGVRQMHQNAPRSQMATERDLQAWKRRVVVPEM
SPSLYRRQEEYRIGKGEEEISLYLSKKKRPPHGARDDSDDDKTYAKRTQSRRPRVRSLRT
RNTAAEYIEDSCEEGEETRSSADEGNETEVSGAPSAESSNEEEEAEEWKTESSSSSSEYS
DWTADAGINLQPPTRLSSRHRAMVWISSSEEEEEEPPDEEERPPQPPKQRRSRNRTPRRP
SFNREVSNEFRPSAWITDVIPRKSPFVPQMGDEVIYFRQGHEAYVEAVRRGSLYSLNLEK
QPWRKMDLRDQEFVKITGIKYEVSPPTLCCLKLSLIDHGTGRLTDKSFSLKYHDMPDVID
FLVLRQCYDEAWQRNWQPNDRFRSVIDDAWWFGTLVCQEPYQPEYPDSHFQCFTVRWDNG
ETEKLSPWDVEPIPPNAQHPETVGGSVPVTSDEMSELLYQPRRGEWGRRGRDEECERIIS
GIDQLVALDIAAPFAGPVDLVQYPTYCRVVAYPTDLSTIRMRLVNRFYRRISALVWEVRY
IELNARSFNEPSSKIAQTAKKITDVLLKFINKEDCVDILEIYNTMDDLSCTEDEELDDTD
APGTSSGRNLRQRNMEFLYDVDAWKDQCKLLVDYILECEDSEPFRQPVDPDDYPDYRDII
DTPMDFGTVKRTLEEDKYENPVELCKDIRLIFLNAKAYTPNKRSKIYSMTLRLSAFFEER
IRMIIPDYKTALKHSETLRRSQRCRRRLQHREPLQSGCRASGRKGKVLKAQEEVETSSKT
CTTSTSAKASATARFRRRRRRRGVSSGEDSSASDKALSAASGHNTEESTTTSESESEASS
SSSSRASVSSSRRHGSREVGGARVTRNRPAQHWKRPGSVSESEASSSSPQDSDDGSAARP
RSGERRAAGASGSRVTRNRAAAGRERPETGVQVNGHGSRISRDEWASDSDGEGPSDSHTD
SEEEEEEEEEIGRRPSTRRAAVAAANKTKVMSTTEDDEESTCSEKEDDGKAGGCRPRHRV
NKRKLSIQSSSEDEETSPQGDLRSGSREGEQSSSSSKESRDEPLASSRPHQNGETGGTCR
GRATRSSQERSAQVNGHSRTSRTSRARRRGARRPMGAIAEEEGIRRRPSARKTAVAAASK
MKMMTEDDEELPPLGEGGGGRYPRRTTTTKKVLNTESSSEEESVLDVEVGNSGQKCPLQN
GKKLTQKKGMRGHTSESEEHVGNDNKGRVSLQHKKGKLPLKSQRLESGTEEEEPQPSHCR
RPAASASRWKVLASAEETEESSEDNKHRRSNGKSEGAESASSEEEARQPSRSAAQRKTPT
VKPGDRWVSESVDCNNRASSEEGLAHRTKRRYNMRQARRFAADGDEASHSREQFSRACKR
KSFAVLREDSLSESEDPGDLPTAAASERSTRLQQERDSSEERSEPAEDAQRKTSREQDHC
SSRRHGGKLDCRGSCTESTVYQKWSSGYLAGTGVEVEASSRRDAGKSHCTDSDSQEEQPG
RQERVFSGRKPCLRALPRKRDATEDSEEEEWRSETEGGLESRKKGQLWRTGARDEGRRRE
PSGRANLRKRRLSDSEDNLPIKKKCLRNLERHSRGNGEEQTFRKKYCEEESASDFEAEEG
DDDGDRDESDGLSEDEEPRSRGRTIRSAPHVAAARNRSSSSHQRRWESSSSGGGGWSTGS
GSEEESGSSASLLSGPHTRVRGGGRGRRFGDTDCSSQGAARRSGRKRRKASAVDSDGGEV
FSAPRKPRQASRIRTRNRGRRTVSYRDSE
NT seq
7830 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgagcaccctcggcggtgacgtcacccccccagggcgggccgaaccacagcgc
ggaaaaacacggccaggcagcgtctcccaaccagcccggcatcgccagtgcgcggcgcaa
acagcaggggaaaggcggccggggatcaccgcgaagcctcctttcgagccgcataccgcg
tttccgtcaagcgcgccgagcccgcagccgcggggcagcggcgagggactattttccctc
tccccccccacctccccccgcttcctgtgcgccggcggaagtatacacggcgcagccccg
gcctgctcactccaatggcgaccggagcgggctgagcgcagagcgggagcggccgaggag
ggggtcagagcgctgccacccgaaataaataaatatctctctctctctccgtctgctacc
gtagggggggaaaacagaccacgactcctccttcgcctcccccacttaaccatggccggc
acgacggccaaaagtcagagtgtctcgctcctcgagtcggagctgtactacctgatctcc
cgcttcctgacgaccggcccctgccggagagcggcgcaggtcctggcgagcgagctggag
gagtacgagctcctgcccaggcgcctggactggcgaggagacgagcaccctcgctcctac
gaagacttggttcgggcgaacagccatgtggccccggaccacctgctgcagatctgccgc
cagctgggcccgctgctggacagacaggtcccctcctgcgtcccgggcgtggggtccctg
ctgggggcgggccgccactccgcgctgcgcctggacaaagatttcaagaaagtcgtgtgg
aagggctcggctttcgcagccctgcgcagaggcaggcccccggagatgccgccgacctac
agcgaccccccgaatctcgtggagatttatcgtgccagagagctcacgggcacagagcgt
tttagttctgcgtgtcccgtgacccactatcagcgcatgaagatgcacaggaggatcctg
ggacacctctctgctgtgtactgcgtggccttcgaccgcaccggactccgcattttcacc
ggctctgacgactgtttggtgaagatctggtcctctttcgacggcaggttgcagtccacg
ctgaggggccactcggcggagatctctgacttggccgtgaacttcgagaacacgctcatg
gcggcgggcagctgcgacaagtcgatccgcgtgtggtgcctccggacctgcgcccccgtg
gccgtgctgcaggggcacacgggctccatcacctccctgcagttctccccttgtgccaag
ggcacagtgaggtacttggtgtccactggcactgatgggatggtgtgcttttggcagtgg
gacgcaagcaacacaagttttgtagatcgtccgcacaagtttacaaaaagactccgaccc
ggtgttcagatggtgtgttcttcatttagtcccggtggcatgttcttggcaacaggaagt
actgaccatgtcatcagaatatactacctgggtggtggcagccctgagaggtgttcagag
ctcgaggcacacacggataaagttgacagtatccagttttgcaataccggggacaggttt
gtgagcggcagcagggacggtacagctcgaatatggaagctccagcagcagcgatggaga
agcattttacttgacatggctactaacttaccagggtctgctcctgcggcggcggaggaa
agcttcttcaagtcgaaggtgacgatggtcgcctgggaccgacacgaccactccgtcatc
acagcggtcaacaaccacctcctcaaggtgtggaactcctacacggggcagctgcttcac
gtcctgaagggccacgaggacgaggtcttcgtgttggagcctcaccccttcgactcccgg
atcctgctgtcggccggccacgatggcaatgtcttcatatgggatgtcgtcagaggaacg
aaaacccagcattacttcaacatgattgaggggcagggtcacggggcggtttttgactgc
aagttctctccagatggccagcacttcgcctgcacggactcccacggacatctgatcata
tttgggtttggatcctctaagccctatgagaagcttccggatcagatgtttttccacacg
gattaccggcccctcatccgagacgcgaataattacgtgctggatgagcagacgcagcag
gcaccccacctcatgccgccccctttcctggtggatgtggatggaaacccacaccccccc
agataccagaggctcgtccccggcagggagggcttcgccgacgagcacctggtgccccag
ctgggatacgtagcgacaagtgacggggatgtggtggagcaggtgatcagccagcagacc
ggggatcaggacgatgcgggccaggagcccagcatgctggacggcttcatccgggagctg
caggagcagcaggacaggcagaacggagcagagcctggagcaccccccagcgtagaaggc
accccccgcagagttttccgaagccagagcgcggacgtgcagtcgtctcccagcgtgggg
ctgcggcgcagcgggcaggtggagggcgtgcggcagatgcaccagaacgcgccgaggagc
cagatggccacggagagggacctgcaggcctggaagcgcagggtcgtggtgccggagatg
tcgcccagcctgtaccggagacaggaggagtacagaatcggcaagggggaagaggagatt
tcactctacctgtcgaagaagaagagaccacctcacggggcacgggacgattctgacgat
gacaagacttacgctaaacgcacgcagtctcgcaggccgcgggtgaggagccttcggacc
cgcaacactgcggctgagtacatagaagactcttgtgaggagggggaggaaaccagaagc
tctgctgatgagggcaacgaaacagaagtcagcggagcaccttcagcggagtcttccaac
gaggaagaggaggcagaggagtggaaaaccgaaagctccagctcctccagcgagtactcg
gactggacagccgacgcgggcataaacctgcagccgcccacccggctctcatcccgccac
cgtgcaatggtgtggatcagcagctccgaggaggaagaggaggagcctcctgacgaggag
gagcgcccgcctcagcctccgaaacagaggaggtccaggaacagaactccccggagacca
tcatttaacagagaggtttcaaacgagttccgtccctccgcttggatcaccgatgtcatt
ccccggaaatcaccgtttgttcctcagatgggtgacgaggtgatctacttccgccagggc
catgaggcgtacgtggaggccgtgagaagaggcagcctgtacagccttaaccttgagaag
cagccgtggagaaagatggacctgagagaccaagagttcgtaaaaatcactggaatcaag
tatgaagtgtcgcctccaacactgtgctgcctgaagctttctcttattgatcacggcaca
gggagactcacggataaatccttctctctaaagtaccacgacatgccagatgtgattgac
ttccttgtcctgaggcagtgttatgatgaagcctggcagagaaactggcagccaaatgac
cgattccgatctgtgatcgacgacgcctggtggtttgggactctggtgtgtcaggagccg
tatcagccggagtatcccgacagtcactttcagtgcttcaccgtgcggtgggacaatgga
gagacggagaagctcagcccctgggatgtggagcctattccaccgaacgcccagcacccc
gagacggtgggaggcagcgtgcccgtgacctcggacgagatgagcgagctgctgtaccag
ccgcggcgcggggagtggggccggcggggccgggacgaggagtgtgagcggatcatcagc
ggcatcgatcagcttgtggccctcgacatcgcggctccctttgctggcccggtggacctt
gttcagtatcccacctactgcagggtggtggcgtaccctaccgacctcagcaccatcaga
atgaggctggtgaatcggttttacagaaggatctcggctttagtctgggaggtgaggtac
attgagctcaatgccaggtccttcaatgagccaagcagcaagattgcacagacggcgaag
aagatcacagacgtcctcctcaagttcattaataaagaggactgtgtagacattttggag
atctacaacacgatggacgatctgagctgcactgaagatgaggagctggacgacacagat
gcacctggaacttcctcgggaaggaacctgagacaacgcaatatggagtttctctacgac
gtcgatgcctggaaggaccagtgcaagctgctggtggactacatcctggagtgcgaggac
tccgagcccttccggcagcctgtcgatccggatgactatccggactatcgggacatcatt
gacacgccgatggattttgggacggtgaagcggactctggaagaggacaagtatgagaat
ccagtcgagctatgcaaagatatccgcctcatcttccttaatgcaaaagcctatacacca
aataagcgttcgaagatctacagcatgaccttgcggctctccgccttctttgaggagcgg
ataaggatgatcatcccagactacaagacggcgctgaagcacagcgagacgctgcggcgc
agccagcggtgccggcggaggctgcagcaccgagagccgctgcagtctggctgccgtgct
tccggtcggaaagggaaggtattaaaagctcaggaagaggtggaaacatcatccaagact
tgtacgacatctacctcagccaaagcgtctgccacagcgcggttccggaggaggaggagg
aggagaggtgtctcgtctggagaagattcttcagcgtccgacaaagccctctctgcagcc
tcagggcacaacaccgaggagtccacgaccacctcggagagcgagagcgaggcgtcttcc
agcagcagttccagggcctcggtctcctcctcgcgtcgccatggtagcagggaggtgggc
ggagccagggtgaccaggaacaggcctgcgcagcactggaagaggccaggttcagtgtcg
gagagcgaggcgtcttccagcagcccccaggacagcgacgatggcagtgccgcgcgcccg
cggagcggagagaggagagcagccggggcgtccggcagcagggtgaccaggaacagggct
gcggccggacgggaaaggccagagaccggcgtgcaggtgaacggccacggcagcagaatt
tcccgggacgagtgggcgagtgactcggatggggaggggccttctgactcgcatactgac
agcgaggaggaggaggaggaggaggaggagattgggcggaggccgtcgaccaggagggcg
gctgtggctgccgccaacaagacgaaggtgatgagcaccaccgaggatgacgaggagtcg
acctgctctgaaaaggaggatgatgggaaggcgggtggctgccggcctcggcacagggtg
aacaagcgcaagctgagcatccagagcagctctgaggacgaggagacgtcgccccagggt
gaccttcgctcagggtcgagagaaggtgagcagtcttccagcagctcgaaggagagccga
gatgaacctctggcctcgtctcgtccccatcagaatggggagaccggagggacctgcagg
ggcagggcaaccaggagcagccaagagagaagtgctcaggtgaacggtcacagtcggacc
tctcgcacgagcagagcgaggaggcggggggctcgtcgacccatgggagccatcgccgaa
gaggagggaatcaggcggaggccgtcggccaggaagacggcggttgctgctgccagcaaa
atgaagatgatgactgaggatgacgaggagctgccgcccctgggagaagggggtggtggg
cggtaccctcggagaaccaccaccaccaagaaggtgttgaacacggagagcagctccgaa
gaggagtctgtcctggacgtggaggtgggaaatagcggccaaaagtgtcctctccaaaat
gggaagaaattaacgcagaagaaggggatgagaggacacacctcggagagtgaagagcac
gttggaaacgataataaggggagagtgtctttgcaacataaaaagggtaaattgccctta
aaaagccagaggcttgagtctggcactgaggaggaagaaccacagccctcccattgcaga
cgccctgcggcttcagcttcaagatggaaggtgttggcttctgccgaggaaaccgaagaa
tcgagcgaagacaacaagcacagacggtcgaacggcaagagcgagggagcagaatctgcc
tcgagcgaggaggaggccaggcagccttctcggagtgcagcccagagaaagacgccaact
gtgaaacctggggataggtgggtgtctgaaagcgtggactgcaacaacagggcttcctca
gaggagggtctggcgcatcgcaccaaacgcaggtacaacatgcggcaggctcgcaggttt
gccgctgacggggacgaagccagtcacagcagggaacagttttcccgtgcttgtaaaagg
aaatccttcgcagtcctgagggaagactctctgtctgagagcgaagaccctggggacctg
cccactgcggccgcctctgaaaggagcactaggctccagcaggagagagactcgtcggag
gagcgttcagagcctgcagaggacgcccagcgcaagaccagcagagaacaggatcattgt
tcttccaggagacacggtggtaagctggactgtaggggtagctgtactgaaagcactgtc
taccagaaatggtcttccggttacttagcgggcacaggcgtggaggtggaggcaagcagt
cggcgtgatgcaggaaaatcgcattgcacagacagcgactcccaggaagagcagcctggc
cgtcaggagagagtgttttccggcagaaaaccttgtctgcgagccttgccccggaaaaga
gatgccacggaggactcggaggaagaggaatggcggtccgaaacagaaggtggcttggaa
tccaggaaaaaaggccaactctggaggaccggtgctcgggacgaggggaggcggcgggag
ccgagcggtcgggccaacctcaggaagaggcgcctctccgattccgaggataacctcccc
atcaaaaagaaatgcctgcggaatttggagcgccattctagaggaaacggagaggaacag
acatttagaaaaaaatactgtgaagaagaatcggcaagcgattttgaagccgaggaggga
gacgacgacggggaccgcgatgagagcgacgggctctcggaggacgaggagccgagatcc
agaggcaggacgatccggtcggctccgcacgtcgcagccgcaaggaacagaagcagctcg
agccaccagaggagatgggaaagcagcagcagcggcggcggcggctggagcactgggtct
ggcagcgaggaggaaagcggctcttccgcgtcgctcctttcggggccacatacccgagtc
cgcggcggcggcagggggcgccgctttggggacacggactgcagcagccagggagccgcc
cggcgctccggaaggaagcggaggaaggcgtcggccgtcgacagcgatggcggcgaagtc
ttttccgcccccaggaagccgcggcaagcctcccgcatccggacgagaaatcgcggcagg
cggaccgtgtcgtatcgcgacagcgagtga
DBGET
integrated database retrieval system
