Lepisosteus oculatus (spotted gar): 102689479
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Entry
102689479 CDS
T07349
Symbol
nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102689479 (nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102689479 (nhlrc1)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102689479 (nhlrc1)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102689479 (nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_5
NHL
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
Prok-RING_4
Beta-prop_IFT122_1st
zf-C2H2_AcuF
Motif
Other DBs
NCBI-GeneID:
102689479
NCBI-ProteinID:
XP_006635964
Ensembl:
ENSLOCG00000018335
LinkDB
All DBs
Position
LG11:25448157..25450344
Genome browser
AA seq
413 aa
AA seq
DB search
MQPTGSMTEAEIVSAGGVRSSRQSCNTVRILNEIETSLLECKVCFERFSVERVKGRPKNL
PCGHVMCWECLRSLAHPRFQRLECPFCRRLCSPAEASDCLVVAHLTELLGGGRPPCAGYS
AGGFGTVGLKLRGAFGGWGRLVNPTGAALFGGRGALVVVHDGRKRVGIFSLQGERLHGFG
RKGTLPDDICYPLDVAVTPAGHIIVTDAGDRSVKVFTSAGRNLLTVRETFKLPWGTDADG
SNRIFVTDADAGTLSRLVVDFCTNLVTGHHVASSKLCCPREIASSKLTGSVVVVEHLRGW
EHRSSTATRLKLFDSQLRLLSQIDTFGFSLVAPVQMNVSAVAFDSEDNVIAADGSRRVVV
CLGKLRESPSFIPLINQGLGRPVGLICTAGNMLVVLDSSEQAVKIYKDGRDQL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccacaggcagcatgacggaggcagagatcgtgtccgcaggaggagttcgcagc
agcaggcaaagctgcaacacggtaaggatcctgaacgagatcgagaccagcctactggaa
tgcaaagtgtgctttgagagattcagcgtggagcgggtcaagggcaggcccaagaatctg
ccctgcggtcacgtgatgtgctgggaatgcctccgctctctcgcccaccctcgctttcag
aggctggagtgccccttctgccgcaggctctgcagccccgcggaggcgtccgactgtctc
gtggtggcccacctgacggagctgctcgggggcggccgccctccctgcgcgggttacagc
gcgggcgggtttgggactgtgggcctgaagcttcgcggggctttcggaggctgggggcgc
ttggtgaaccccacgggagctgcccttttcggcgggcggggggcgctggtagtcgtgcat
gacggtaggaagcgggtgggtatcttcagcctccagggagagcgcctccacgggttcggg
cgcaaggggacgttgcccgacgatatctgctaccccctggacgtcgctgttacgcccgca
ggccacattattgtgaccgacgccggggatcgctctgtcaaagtgttcacctccgcggga
agaaatcttttgaccgtcagagagacgttcaagttgccttggggaacggatgccgacggt
tccaatcgcatctttgtcacggatgcggacgctgggaccctttctcgcctggtggtggat
ttctgcacaaatctcgtcaccggtcaccatgtggcctcctcgaagctgtgctgccccaga
gagatcgcatcctccaagctcacagggtccgtagtggttgtggaacatctaagaggttgg
gaacacagaagcagcacagccacaaggctcaaactgttcgatagccagctcagactgcta
tctcagatcgacacctttggattcagtttggtggctccagttcaaatgaatgtctccgcg
gtggcctttgacagcgaagacaacgtgattgcagctgatggcagccggagagtggtggtg
tgcttggggaagctcagggaatccccttcctttattccactcatcaaccaagggctgggt
cgccctgtaggactgatctgcacagcggggaacatgctggtcgtcttggacagcagcgag
caagctgtgaaaatttacaaagatggccgagaccagctgtga
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integrated database retrieval system
