Lepisosteus oculatus (spotted gar): 102695097
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Entry
102695097 CDS
T07349
Symbol
aplf
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
KO
K13295
aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loc03400
]
102695097 (aplf)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102695097 (aplf)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
102695097 (aplf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHH
FHA_2
FHA
HUN
Motif
Other DBs
NCBI-GeneID:
102695097
NCBI-ProteinID:
XP_015218163
Ensembl:
ENSLOCG00000016006
UniProt:
W5NGF1
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All DBs
Position
LG16:complement(7721886..7762719)
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AA seq
531 aa
AA seq
DB search
MSGFELEPLDGNCSIPLPVGETLIGRGPLLRVSDKRVSRNHGLLEVVDGQLRIKPTHLNP
CFYQSSLDDLPHPLEKDKWHPLFPGDLFSLLPGKYIYRVVSTNCDSTQRNSQALADDDDD
DDDVSVTETSLLSPRVGEKPGAQGRRNDLRDKTLGLTQEYPETSGSSIEKECKAKTDVPP
SKNIGGSAEGGRTEEGKSMQRKRVLPAWMLQGAAGAQRTLKSTGGEKQGRSKLSPEQSKG
TGSRSQLTSSKGIEETDTRPASPGRKPKRKKCEEVQGEKCQATSSAADNGRIRREDEHIE
ESDKVSGRLSDDEELRHVPAGKSDPHSKSREVDLSDSEEKEGPSQRPLQRKGQGTLPKAT
GSSGSASPMMAGTSRKQPRNPCMYGTNCYRKNPVHFQEFSHPGDSDYEEKSAVSDDASDC
RPECPYGTDCYRKNPQHRKEYRHTKASETENRRPKRKCIQKAGKKSALAGDDDDGEPNDY
DLNDSFIDDEELEDSDHSDEDSDYVPDSDDSVAEDLNTLSKEAKEFMGRKK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatttgaactggaaccattggacgggaactgttcaatcccgctaccagttgga
gaaaccttaattggaagaggacctcttctcagggtcagtgataaaagagtatcgagaaat
catggactgctagaagttgtggatggccagctcaggatcaaaccaactcacttaaatccc
tgtttctatcagtcctcccttgatgacctcccccaccccctggagaaagataaatggcac
cctctcttccctggagaccttttttctcttctcccaggaaaatacatttacagggtcgtc
tccaccaactgtgacagcactcagaggaacagccaggccttggctgatgatgatgatgat
gatgatgatgtatccgttactgaaacatcccttctatcaccaagagtgggtgaaaagcca
ggggctcagggtagaaggaatgatttgagggacaagactctggggctaacccaggaatat
ccagaaacttcaggaagctccatagagaaggaatgcaaagccaagactgatgtgcctcct
tcgaaaaacattggtggttcagcggaaggtggcaggactgaagaggggaaaagcatgcag
aggaagagagtgctgccagcgtggatgttgcagggtgctgcaggagcacagcgcaccctg
aagtctacaggaggagaaaaacaaggtagaagcaaactaagccctgaacagtcgaaaggc
actggaagtcggagtcaactgacatcttctaagggcatagaagagactgatacaagaccg
gcatcccctggcaggaagccaaagaggaagaagtgtgaggaagtacagggagagaaatgc
caggctacctcttctgcggcggataacggcagaatccgacgagaggatgagcacattgaa
gagtcggacaaggtcagtgggaggctcagcgacgacgaggagctgcgccatgtgccagct
ggcaagtccgatcctcattccaagtctagagaagtggacctgagtgacagcgaagagaag
gaaggcccatctcagagaccactacaacgcaaaggccagggaactcttcccaaagctaca
ggctcatctgggagtgcaagccctatgatggccgggaccagcagaaaacagcctagaaac
ccctgtatgtacggaacaaattgttacaggaaaaatccagtgcattttcaggaattcagc
catccgggagatagcgattatgaggaaaagtcggcagtgagtgatgatgcgagtgattgc
cggccagaatgtccatatggaacagattgttacaggaaaaacccacaacacaggaaagaa
tacagacacactaaggcttcagaaactgaaaacaggagaccaaaaaggaaatgcatccaa
aaagcaggtaagaagagtgctttggcaggagatgatgatgatggggagcccaatgactat
gacctgaatgacagcttcatcgacgatgaggagctggaggactctgaccacagtgatgag
gattctgactatgtaccagactctgatgacagtgttgcagaggatctaaacactttaagc
aaagaagctaaggagtttatggggagaaaaaaatga
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