Lepisosteus oculatus (spotted gar): 102697191
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Entry
102697191 CDS
T07349
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102697191
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102697191
Ion channels [BR:
loc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102697191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
102697191
NCBI-ProteinID:
XP_015224088
LinkDB
All DBs
Position
LG23:12663634..12700406
Genome browser
AA seq
1549 aa
AA seq
DB search
MFSWVVKVVPQPPEPPKPLGPQEKVEPKPSAPEPEKKVTEKEKAKEQPPKDAAAKTEPEK
PKAQEDKSEPPGVLTWISQGLVNVLPKPVESPQVPRATAGDTAAKAEKKEEPKAETKPKE
SEKCPEPTSSKPSEEQAVGVLSWIVQGLGKVVPQPEEKHKAVAPAEGPKTEVKEAQPPPP
PSVPVPEPQPEVKIIEVVSVTSRETASEIDNTAQKNPPPTPSKARVIEWLKQGLEKVVPH
PTEQPAPLNTAPQKQAAEEKKEEAPKKETGKKETAGEAPAPAPAPAPAPAPAPAPAPAPE
KDPKPAEPAKAPAETPKPASEDVQPGVVSWFVQGLEKMIPQPVTKPKADGTGEKGASAVQ
EISILPDPAGGDLVLEEVESDWENEPTEQQAPPAMPLEETPPLQEASQEPPTHPRILAMQ
QEDAETQTERWTPLLQAIQQEAEAAARAALEDRLRQEKMATEKTTEELGERAEQSVGELD
DGEQLPNIQEEENEVDPELQMIREESEEDDSNKTTEFVYECQSQWDYSMKKNGGGDSNVL
FRRLLVDVCPAGGFPSALHTELGEDGTPAASEGSPAPPEAATEPEEEPVREGSPGKQQSP
VGEACAVQEPEPEPEPEPEPEPQPEPEPGPEPGPEPEHEPETGPEPEHEPETGPEPEPEP
EPEPEPEHEPEPGPEPEPEPEPEAEPEAGEGGSPAQQPQRVQESPVREVPPAEDLREEAA
QEAEPVTQQPDTTEALEPPAGAHQEEESQAVEEECGESSRPSIHPSVNVEDVDSDGDASG
GHQKTSPVILPSSPYTSKTLTVPGVPVAARSSSSPDKEEQRLQNFWTKIKKLYSQEESME
DAETTVKAWPSQTSLLSEDEMRERPASAASQTSTIVNERLQELVKMFKERTERVKEKLID
PDESDKDSPSATPEKKLPPPPPPPEKKEEPAPEKEGEEHYCEMLCCKFKTMPWMTRLKEY
RFPQSIDPFTNLIYVLWLFFVTAAWNWNVWLIPVRWAFPYQTPDNIHLWLLMDYLCDTIY
ILDILVFQPRLEFVRGGDIVCDRKDMRENYMKSHRFKMDLIALFPLDLLYLKVGVNSLLR
FPRLLKYMAFFEFNDRLEAIMSKAYIYRVIRTTAYLLYSLHCNSCLFYWASDYEGLGSTK
WVYDGIGNSYIRCYYFAVKTLITIGGLPDPTTLFEIIFQLINYFVGVFAFSIMIGQMRDV
VGAATAGQTYYRACMDNTIKYMTSYRIPRDVQNRVKTWYDYTWQSQGMLDEQELLIQLPD
KMRLDIAVDVNYSIVSKVALFQGCDRQMIYDMLKRLKSVVYLPGDYVCKKGEIGREMYII
KAGEVQVLGGPDGKTVFVTLRAGSVFGEISLLAVGGGNRRTANVVAHGFANLFILDKKDL
AEILVHYPESQKLLRKKAKKMLTKDKKPTDEKAEQKTGKKAIPLQPETPKLFQAALEVTE
KSGIKGTFSKLKQKWHKSSSVEPSSSVPVPPGSPVHRRSPIPRELPEVEEEDIVSQASDS
SMLIRMSPGHHGREQVLTVEVSPKEEGEPTGEAAPAAEGDPKGEGESKK
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctgggtggtgaaagtggttccccagccccctgaacccccaaagcccctggga
ccgcaggagaaggtagagcccaaaccctcagctcctgagccggaaaagaaggtgacggaa
aaggagaaagcaaaagagcagccgccgaaagatgctgcagctaagacagagcctgagaag
cctaaagctcaggaagacaagagtgagccgcccggtgtgttgacctggatctctcaaggt
ctggtcaatgtgctgcccaagcctgtggaaagcccccaggtacctcgggccaccgcagga
gacacagcagcgaaggcagagaagaaggaggaaccgaaagcagaaaccaagcccaaggag
agcgagaaatgtcccgaacccaccagcagtaaacccagtgaagagcaagccgttggagtc
cttagctggattgtgcagggactgggcaaagtcgtcccgcagcctgaggagaagcacaag
gcagtggcccctgcggagggacccaagacagaggttaaagaagcacagccccctccccct
ccatcagtgccagttccagaaccacagccggaggttaaaatcatcgaggtggtgtctgtg
acctcgcgtgagacagcctcggagattgacaacacagcccagaaaaacccaccgcccacc
cccagcaaagcccgtgtgattgaatggctcaagcaaggcctggagaaggtggttccacac
ccaaccgagcagcctgcccctctcaatactgccccacagaaacaggcagcagaggagaag
aaggaggaagctcccaagaaggagactggcaagaaagagacagcaggagaagctcctgct
cctgctcctgcccctgcccctgcccctgctcctgctcctgctcctgctcctgctcctgag
aaagaccccaaacctgctgagccagcaaaagcccctgcagagacacccaaacctgccagc
gaggacgtgcagccaggagtggtgagctggtttgttcagggactggagaagatgatcccg
cagccagtaaccaaacccaaagcagatggaactggggagaaaggtgcatctgcggtgcaa
gaaatttccatcctcccggatccagcagggggcgacctggtcctcgaagaggtggagtcg
gactgggagaacgagcccacggagcagcaagccccccccgccatgcccctagaggagacc
ccccctctgcaggaggccagccaggagccccccacccacccccggatcctagccatgcag
caggaggacgcagagacgcagacggagcgctggacgcctcttctgcaggccatccagcag
gaggcagaggctgccgccagggcggcgctagaggacagactcagacaagaaaaaatggcg
acagaaaagaccacagaggagctgggtgaaagggccgaacaatcagtgggagagctggac
gatggggaacaactgcccaatatccaggaggaagagaacgaagtggatccagagttacag
atgatacgggaggagagcgaggaggacgactcaaataaaaccacagaattcgtttatgag
tgccagtctcagtgggattactccatgaaaaaaaacggagggggagacagtaatgtcctt
tttaggcgcctcctagtggacgtgtgtcctgcaggcggcttccctagcgccctccacacc
gagctgggcgaggacgggactcccgcagcgtcggagggaagcccagctccgcccgaggcc
gctacagaaccggaggaagagcccgtgagggaggggtccccagggaagcaacagtccccg
gtaggagaggcatgtgccgtacaagagcctgaaccagaacccgaaccagaacccgaaccc
gaaccccaaccggaaccagagcccggaccagaaccgggaccggaaccagaacacgagcca
gagactggacccgaaccagaacacgaaccagagactgggccagaaccggaaccagaaccg
gaaccagagcccgaacctgaacacgaaccagagcctggaccagaaccagagcccgaacca
gaaccagaagcagaacctgaagcaggggaagggggctcaccagcacagcagcctcagcgg
gtgcaggagtcccccgtgagggaggtgccgcctgcagaggacctgagggaagaagcagcg
caagaggcagagcctgtgacacagcagcccgacacaacagaggcgctggagccccctgct
ggtgcccaccaggaggaggagtcccaggctgttgaagaagagtgtggcgagagctccagg
ccgagcattcacccttctgtcaatgtggaagatgtggattctgacggagatgccagtggg
ggtcaccagaaaacgtctcctgtcattctcccctcatccccgtacaccagcaagaccctc
acggtcccaggggtgcccgtggcagctcggagcagctcatctccagataaagaagaacaa
aggttgcagaatttctggaccaagataaagaagctgtactcccaggaggagagcatggag
gacgcagagaccacagtgaaagcctggcccagccagaccagcctgctgtcagaggatgag
atgagggagaggcccgcgtcagccgccagtcagaccagcaccatcgtgaacgagcgcctg
caggagctggtgaagatgttcaaggaacggacggagcgcgtgaaggagaaactcattgat
cccgacgaatccgacaaagacagcccttccgccactccagagaagaaactcccacctcct
ccccctcccccggagaagaaagaggagccagcgcctgagaaggagggcgaggagcactac
tgcgagatgctgtgctgcaagttcaagaccatgccctggatgacaaggctgaaggaatac
cgctttccccagagcatcgaccccttcaccaatctgatctacgtgctgtggctcttcttt
gtcacggcggcttggaactggaacgtgtggctgatcccggtgcgctgggcctttccctac
cagacccctgacaacatccatctctggctgctcatggactacctgtgcgacaccatctac
atccttgacatcctggtcttccagcctcgtctggagttcgtccgaggcggagatattgtg
tgtgacagaaaggatatgagagaaaactacatgaaatcccatcgcttcaagatggatctc
atagctcttttccctctggatttgttgtatttaaaagttggagttaactctttgctgcga
tttcctcgtttactgaagtacatggctttctttgaattcaatgaccgcctggaagcaatc
atgagcaaagcttacatctacagagtcatcaggaccactgcctacctgctctactccctg
cactgcaattcctgtctcttctactgggcgtctgactacgagggcctcgggtccaccaaa
tgggtctacgacggaattgggaacagctacatccgctgctactactttgcagtgaagact
ctgatcaccatcggggggcttccagaccccacgaccctctttgaaatcatcttccagctg
atcaattactttgttggggtcttcgccttctccatcatgattgggcagatgagagatgtg
gtgggagctgccacagctggccagacgtattaccgcgcctgcatggacaacaccatcaag
tacatgacctcctaccgcattccccgtgacgtgcagaaccgcgtcaagacctggtacgac
tacacctggcagtcccagggcatgctggatgagcaagagttgctgatccagctcccagat
aaaatgaggctggatattgctgtggatgtcaattattccatcgtcagcaaggtggcgcta
tttcagggctgtgacagacaaatgatctatgacatgctgaagaggctaaagtctgtagtt
tatctacctggagattatgtctgcaagaagggtgagatcgggagggagatgtacattatc
aaggcaggagaggtgcaggtgctgggtggtccagatgggaaaacggtctttgtgactctc
cgagcaggttctgtgtttggagagatcagcctgctggcagtgggagggggcaaccggcgc
acagccaatgtggtggcccatgggttcgccaacctgttcatcctggacaagaaggacctg
gccgagatccttgtgcactatcccgagtcccagaagctgctgcggaagaaggccaagaaa
atgctgaccaaagacaagaagcccacggacgagaaggcagagcagaagacaggcaagaag
gctatccccctgcagccagagacacccaagctgttccaggccgcgctggaggtcacggaa
aagtcagggatcaagggcactttctccaagctgaagcagaagtggcacaagtccagctct
gtggagccctccagctctgtgcccgtgcctcccgggtccccagtgcaccgccgttccccc
atcccacgcgaactgccagaggtggaggaagaggacatagtgtcccaggcctcggacagc
tccatgctgatccggatgagccccgggcaccacggccgcgagcaagtcctgacggtggag
gtgtccccgaaagaggaaggagagcccacgggggaggcagcacccgcggcagaaggggat
cccaagggagagggggagtccaagaagtag
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integrated database retrieval system
